Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1077 ATGAAACCTTTTCTTTTCTTTCTCATCACATTCTTATTCTTTTCCCAAACACAGTTGCTACCACTAGTTTCCTCTGCCACAACAACTATTCCCTTTCAACTCATAAGCCTCCTCTCAATAAAATCCTCCCTCATTGACCCTCTAAATCATCTCAATGATTGGAAAAATAACCCTTCTGATTCCAATAACCAGCAAGACCCAATTTGGTGTTCTTGGACAGGAATCAATTGCCACCCAAAAACAGCTCAAATTACTTCCCTTAATCTCTCTAACCTCAACCTTTCAGGCATAATCTCGCCCAAAATCCGCTACTTAACTACGTTAACTCACTTGAACATTAGTGGAAATGACTTCAATGGAACTTTCCAAACAGCAATTTTTCAACTCAATGAGCTTAGAACACTGGACATCAGCCATAACTCATTCAACTCAACTTTCCCACCTGGAATTTCAAAGCTTAGATTCTTAAGAGTCTTCAATGCTTACAGTAACAGTTTCGTAGGCCCTCTCCCCGAAGAATTTATCAGGCTACCTTTTTTAGAACACCTTAACCTCGGTGGAAGCTACTTCAGTGGCAAAATCCCTCAAAGTTATGGAACTTTCAAAAGACTCAAATTTCTTTATTTGGCTGGTAATGCATTGGAAGGTTCACTACCACCTCAACTAGGCTTATTATCAGAGTTACAACGCTTGGAAATCGGATACAACTCCTACTCAGGAGCAATACCAGTGGAATTAACAATGTTGTCTAATCTCAAGTACTTGGATATCTCAGGTGCCAACATTTCTGGTCAAGTGATTCCTGAACTAGGTAACTTATCCATGCTTGAAACACTGCTTCTCTTCAAAAATCATTTACATGGTGAAATCCCATCAAGCATAGGAAAGTTGAAATCATTGCAAGCTCTTGATTTATCGGAAAATGAACTCACTGGTTCGATTCCATCAGAAATAACAATGTTGAAGGAGATAGTAGATTTGAGGCTCATGTATAACAAGCTAAAAGGTGAAATTCCACAAGAAATTGGTGACCTTCCAAAACTCAACACTTTCCATATTTTCAACAACTCATTCACCGGTGCATTACCACCAAAACTCGGTTCTAACGGGTTACTACAATTACTCGATGTTTCCACAAACTCGCTCCAAGGTTCAATCCCTATCAACATTTGCAAAGGAAACAATCTTGTAAAATTCAATATCTTCAACAACAAATTCACCAATAACCTTCCATCATCACTCACAAATTGCACCTCACTCATTCGAGTTCGTATCCAAAACAACAATCTCAATGGGTCAATTCCACAAACACTTACAATGCTTCCAAATTTAACCTACCTTGATTTAAGCAACAACAATTTCAAAGGGGAAATTCCTCAAGAATTTGGGAGCCTACAATATCTAAACATCTCAGGAAACTCTTTTGAAAGCGAATTACCTAACAGCATTTGGAATTCAAGTAATCTTCAGATTTTCTCAGCTTCATTCTCGAAAATCACCGGTCAAATTCCCGATTTTTCTGATTGCAAATCGATCTACAAGATCGAATTACAAGGAAATTCAATCACCGGCACAATTCCATGGAACATTGGTGATTGCGAAAAACTGCTTCAGTTAAACCTAAGCAAAAACAACCTCACCGGAATCATTCCTTACGAAATCTCAACTCTTCCTTCAATCACCGACGTTGATCTCTCGCAAAACTCACTCACTGGAACAATTCCATCAAGCTTCAACAATTGCTCAACTCTCGAAAATTTCAACATCAGTTTCAATTCCCTTACCGGAGCAATCCCTTCCTCCGGCGTCTTCCAAAGCCTCCATCCTTCTTCCTACTCCGGCAATGAAAATCTCTGTGGTGTTCTCTTAGCCAAACCCTGCGCCGATGAAGCAGTCACCTCCGGCGAAAACGAACTCCAAGTTCACCGTCAACAACCGAAGAAAACCGCCGGCGCAATTGTTTGGATCATCGCCGCCGCGTTTGGGATCGGACTCTTCGTCCTCGTCGCCGGAACACGGTGTTTTCAAACAAACTATAACCGTCGATTTAACGGTAATGACGCTAACGGCGAAGTTGGACCGTGGAAGTTAACGGCGTTTCAACGGTTAAATTTCACAGCGGAAGACGTTCTCGAATGCGTTTCAATGTCTGATAAAATCTTAGGAATGGGATCCACTGGAACTGTTTATAAAGCGGAACTTCCAGGTGGCGAAATCATAGCCGTTAAAAAGCTTTGGTCAAAACAAAAGGAGAATAGTACTATAATCCGACGGAGGAGAGGGGTTCTAGCTGAAGTGGATGTATTAGGAAATGTGAGACACAGGAATATTGTGAGATTGTTAGGGTGTTGTAGTAACAAGGAAATTACCATGTTGCTTTATGAGTATATGCCAAATGGTAACCTTGATGAGTTTTTGCATGCAAAGAATAAAGGGGACAATATGGTAATTGTGAGTGATTGGTTTACTAGGTATAAGATAGCTTTGGGTGTGGCACAAGGGATAAGTTATCTACACCATGATTGTGATCCGGTGATCGTGCATAGAGATCTTAAACCTAGTAATATTTTGTTGGATGGTGAGATGGAAGCTAGAGTGGCAGATTTTGGTGTTGCTAAGTTGATTCAAACGGACGAGTCTATGTCTGTTATTGCTGGTTCCTATGGTTACATTGCTCCGGAATATGCTTATACACTCCAAGTTGATGAGAAGAGTGACATATACAGCTATGGAGTGGTATTAATGGAAATTTTAAGTGGAAAACGCTCTGTAGATCAAGAATTTGGTGATGGGAATAGCATTGTAGATTGGGTTAAATCCAAAATAAAGAGCAAAGATGGAATTGAAGGTATATTAGACAAGAATGCTGGTGCAGGGTGTAATTCAGTGAGGGAAGAAATGAAACAAATGCTTAGAATTGCATTGCTTTGCACAAGTAGAAATCCAGCTGATAGACCTTCAATGAGAGATGTTGTGTTGATGCTTCAAGCTGCTAAACCTAAAAGGAAATTGTTTGATAGTGTTGTTGTAAGTCATTGTGCTAGTGGTGACAATGTTGATGGTGGTGGAGGTGATGATATTCCATTGGCTCAAAAGCCAATTACCAATGAAAGCTAG 3117 0.4001 MKPFLFFLITFLFFSQTQLLPLVSSATTTIPFQLISLLSIKSSLIDPLNHLNDWKNNPSDSNNQQDPIWCSWTGINCHPKTAQITSLNLSNLNLSGIISPKIRYLTTLTHLNISGNDFNGTFQTAIFQLNELRTLDISHNSFNSTFPPGISKLRFLRVFNAYSNSFVGPLPEEFIRLPFLEHLNLGGSYFSGKIPQSYGTFKRLKFLYLAGNALEGSLPPQLGLLSELQRLEIGYNSYSGAIPVELTMLSNLKYLDISGANISGQVIPELGNLSMLETLLLFKNHLHGEIPSSIGKLKSLQALDLSENELTGSIPSEITMLKEIVDLRLMYNKLKGEIPQEIGDLPKLNTFHIFNNSFTGALPPKLGSNGLLQLLDVSTNSLQGSIPINICKGNNLVKFNIFNNKFTNNLPSSLTNCTSLIRVRIQNNNLNGSIPQTLTMLPNLTYLDLSNNNFKGEIPQEFGSLQYLNISGNSFESELPNSIWNSSNLQIFSASFSKITGQIPDFSDCKSIYKIELQGNSITGTIPWNIGDCEKLLQLNLSKNNLTGIIPYEISTLPSITDVDLSQNSLTGTIPSSFNNCSTLENFNISFNSLTGAIPSSGVFQSLHPSSYSGNENLCGVLLAKPCADEAVTSGENELQVHRQQPKKTAGAIVWIIAAAFGIGLFVLVAGTRCFQTNYNRRFNGNDANGEVGPWKLTAFQRLNFTAEDVLECVSMSDKILGMGSTGTVYKAELPGGEIIAVKKLWSKQKENSTIIRRRRGVLAEVDVLGNVRHRNIVRLLGCCSNKEITMLLYEYMPNGNLDEFLHAKNKGDNMVIVSDWFTRYKIALGVAQGISYLHHDCDPVIVHRDLKPSNILLDGEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDQEFGDGNSIVDWVKSKIKSKDGIEGILDKNAGAGCNSVREEMKQMLRIALLCTSRNPADRPSMRDVVLMLQAAKPKRKLFDSVVVSHCASGDNVDGGGGDDIPLAQKPITNES* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1077 1038 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Mtr4g1077 1038 Gene3D Transferase(Phosphotransferase) domain 1 797 1012 - -
Mtr4g1077 1038 SUPERFAMILY L domain-like 386 621 - -
Mtr4g1077 1038 Gene3D Ribonuclease Inhibitor 288 389 IPR032675 -
Mtr4g1077 1038 Gene3D Ribonuclease Inhibitor 196 287 IPR032675 -
Mtr4g1077 1038 SUPERFAMILY RNI-like 86 432 - -
Mtr4g1077 1038 Gene3D Ribonuclease Inhibitor 464 507 IPR032675 -
Mtr4g1077 1038 Gene3D Ribonuclease Inhibitor 390 463 IPR032675 -
Mtr4g1077 1038 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 1019 - -
Mtr4g1077 1038 PRINTS Leucine-rich repeat signature 300 313 - -
Mtr4g1077 1038 PRINTS Leucine-rich repeat signature 441 454 - -
Mtr4g1077 1038 ProSiteProfiles Protein kinase domain profile. 715 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1077 1038 Pfam Leucine rich repeat N-terminal domain 34 77 IPR013210 -
Mtr4g1077 1038 Gene3D Ribonuclease Inhibitor 34 195 IPR032675 -
Mtr4g1077 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Mtr4g1077 1038 Gene3D Phosphorylase Kinase; domain 1 694 796 - -
Mtr4g1077 1038 SMART serkin_6 715 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1077 1038 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 3 1019 - -
Mtr4g1077 1038 ProSiteProfiles Leucine-rich repeat profile. 299 321 IPR001611 GO:0005515
Mtr4g1077 1038 SUPERFAMILY Protein kinase-like (PK-like) 718 995 IPR011009 -
Mtr4g1077 1038 SMART LRR_typ_2 297 321 IPR003591 -
Mtr4g1077 1038 SMART LRR_typ_2 129 153 IPR003591 -
Mtr4g1077 1038 SMART LRR_typ_2 557 580 IPR003591 -
Mtr4g1077 1038 SMART LRR_typ_2 201 225 IPR003591 -
Mtr4g1077 1038 SMART LRR_typ_2 441 465 IPR003591 -
Mtr4g1077 1038 Gene3D Ribonuclease Inhibitor 508 624 IPR032675 -
Mtr4g1077 1038 Pfam Protein kinase domain 718 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1077 1038 Pfam Leucine Rich Repeat 443 465 IPR001611 GO:0005515
Mtr4g1077 1038 Pfam Leucine rich repeat 512 570 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1077 Mtr-Chr4 14015051 14019531 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1077 3 1003 Receptor kinase-like Gene Family AT1G08590 42.074 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr4g1077 Pkinase 9.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1077 - - gmx:100813189 1556.19