Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1074 ATGAAACCTTTTCTTTTCTTTCTAATCACATTGTCAATTTTTTCCCAAACACTACCATTAGTTCCCACTGTCACAACTCTTCGCTTTCAACTCATCACCCTCCTCTCAATAAAATCCTCCCTAATTGACCCTCTAAATCAACTCGCTGACTGGGAAAATCCTTCCGATAACCACCAAGACCCAGTTTGGTGTTCTTGGAGAGGCATCACTTGCCACCCAAAAACAACACAAATCATTTCACTAAACCTCTCTAACCTCAAATTTTCAGGCATAATCTCACCCCAAATCCGTTACTTAACAACCTTAACCCACTTGAACATAAGTGGAAATGACTTCAATGGAACTTTCCAAACAGCAATTTTCCAACTCGGTGAACTTAGAACACTAGACATTAGCCATAACTCTTTCAACTCAACTTTTCCACCTGGAATTTCGAAGTTAATATTTTTAAGAACCTTTAATGCATACAGCAACAGTTTCACTGGCCCTCTTCCTGAAGAACTAATCAGGCTTCCATTTCTAGAAAAGCTCAGCCTTGGTGGAAGCTACTTCAATGGAAGAATCCCACCAAGCTATGGAAATTTCAAAAGACTCAAGTTCCTAGATTTAGCTGGTAATGCATTGGAAGGCACACTACCACCTGAACTAGGCTTATTATCAGAGCTACAACATTTAGAAATTGGATACAACACATATTCAGGAACACTACCAGTTGAACTAACAATGTTGTGTAGTCTAAAATACTTAGACATCTCACAAGCCAACATTTCTGGTCTAGTGATTCCTGAACTAGGAAACTTAACCATGCTTGAAACACTGCTTCTTTTCAAGAATCACTTAAGTGGTGAAATCCCATCAAGCATAGGCAAGTTGAAATCCCTAAAAGCTATTGATTTATCAGAAAATAAACTCACGGGTTCAATTCCATCAGAAATAACAATGTTAAAGGAACTAACAATTTTGCATCTGATGGATAACAAACTAAGAGGTGAAATTCCACAAGAAATTAGTGAACTCTCAAAACTTAACACTTTCCAAGTTTTCAACAACTCACTCAGAGGTACACTACCACCAAAACTCGGTTCCAATGGGTTACTAAAATTACTTGATGTTTCCACAAACTCACTTCAAGGTTCGATCCCCATCAACATTTGCAAAGGAAACAATTTGGTTTGGTTCATTCTCTTCGACAACAATTTCACCAATAGTCTTCCATCGTCACTCAACAACTGTACCTCACTCACTAGGGTTCGAATCCAAAACAACAAACTCAACGGGTCAATTCCACAAACCCTTACACTGGTTCCAAATTTAACCTACCTAGATTTAAGCAACAACAATTTCAATGGCAAAATTCCACTAAAATTAGAAAACCTACAATACCTAAACATCTCAGGAAACTCATTTGAAAGCAATTTACCAAACAGCATTTGGAATTCAACTAACCTACAATTTTTCTCAGCTTCATTTTCCAAAATCACCGGTAGAATTCCCAATTTCATTGGTTGCCAAAATATTTACCGGATCGAATTACAAGGAAATTCAATCAACGGAACCATTCCAAGGAACATCGGTGATTGTGAAAAACTAATTCAGTTGAATATCAGTAAAAACTATCTGACAGGAACCATACCTCATGAAATCACGAAGATTCCTTCAATCTCCGAAGTTGATCTCTCACAGAACGATCTCATCGGTCCAATTCCTTCAACCATAAGCAATTGCATCAATCTCGAGAATTTGAATGTCAGCTACAACAACCTCACTGGTCCGATTCCGTCCTCCGGTATATTCCCTCACCTTGATCAATCATCCTACACCGGCAACCAAAACCTCTGCGGCCTCCCCTTATCCAAACTCTGCACCGCCAACACCGCCGCCGATGAAAACAAAGCTGATATTGGATTCATCATTTGGATAGGCGCGTTCGGAACTGCACTCGTCATTTTCATCGTTATTCAATTGATTCATCGTTTTCATCCATTTCACGATAACGAAGCTGACCGTAAAATCGAACGGCGGGAGTTAACGTGGTTTTGGCGGGAGTTAAATTTCACTGCGGAGGAAATTTTAAATTTCGCGTCGATTTCTGGTAACAAAATCGGAAGTGGATCTGGTGGAACGGTGTATAAAGCGGAAAACGAAAGTGGAGAAATCATAGCCATTAAAAAGCTATCTTCGAAACCGAACGCGTCAATCCGACGGAGAGGAGGAGTTTTAGCTGAATTAGAGGTATTGAGGGACGTAAGACATAGAAACATTTTGAGATTGTTGGGTTGTTGCACTAAAAAGGAAAGTACGATGTTGCTTTATGAGTATATGCCAAATGGGAACCTTGATGAATTTTTGCATCCAAAGGACAATACGGTAAATGTGTTTGATTGGTCCACTAGGTATAAGATAGCACTTGGTGTGGCACAAGCTATATGTTATTTACATCATGATTGTGCTCCACCAATTGTGCATCGAGATCTTAAACCCAATAATATTTTATTGGATGGTGACATGAAAGTTAGAGTGGCTGATTTTGAACTTGCTAAGTTGATTCGATCCGATGAACCTATGTCTGATCTTGCCGGAACGTATGGTTACATTGCTCCAAAATATGTTGATACCCTCCAAGTTAATGAGAAGATTGATATTTACAGCTATGGAGTGGTTTTAATGGAAATTTTAAGTGGAAAACGCGTTCTAGATCAAGAATTTGATGAAGGGGAAAACATTGTGGAATGGGTTAAGTCAAAAATGAAGGGCAAAGATGGAATTGAAGGCATATTGTACAAGAATGAAGGAGCAGAGTGTAGTTCTGTGAGAGAAGAAATGGTACAAATGCTCAGAATTGCATTGCTTTGCACAAGCAGAAATCCAGCTGATAGACCTTCAATGAGAAAAGCTGTGTCGATCCTTGAAGGGATTAAATCGAAGGGGGAATTACCTGATATTTTTAGTTTTGATGTTGGTGAAGGTGGTGCTAACAAATATTTTGATGTTTGTCTTAGTGTAACTAAGACCCGGATTAAGGGGGTGAACACATTTTAA 3039 0.3893 MKPFLFFLITLSIFSQTLPLVPTVTTLRFQLITLLSIKSSLIDPLNQLADWENPSDNHQDPVWCSWRGITCHPKTTQIISLNLSNLKFSGIISPQIRYLTTLTHLNISGNDFNGTFQTAIFQLGELRTLDISHNSFNSTFPPGISKLIFLRTFNAYSNSFTGPLPEELIRLPFLEKLSLGGSYFNGRIPPSYGNFKRLKFLDLAGNALEGTLPPELGLLSELQHLEIGYNTYSGTLPVELTMLCSLKYLDISQANISGLVIPELGNLTMLETLLLFKNHLSGEIPSSIGKLKSLKAIDLSENKLTGSIPSEITMLKELTILHLMDNKLRGEIPQEISELSKLNTFQVFNNSLRGTLPPKLGSNGLLKLLDVSTNSLQGSIPINICKGNNLVWFILFDNNFTNSLPSSLNNCTSLTRVRIQNNKLNGSIPQTLTLVPNLTYLDLSNNNFNGKIPLKLENLQYLNISGNSFESNLPNSIWNSTNLQFFSASFSKITGRIPNFIGCQNIYRIELQGNSINGTIPRNIGDCEKLIQLNISKNYLTGTIPHEITKIPSISEVDLSQNDLIGPIPSTISNCINLENLNVSYNNLTGPIPSSGIFPHLDQSSYTGNQNLCGLPLSKLCTANTAADENKADIGFIIWIGAFGTALVIFIVIQLIHRFHPFHDNEADRKIERRELTWFWRELNFTAEEILNFASISGNKIGSGSGGTVYKAENESGEIIAIKKLSSKPNASIRRRGGVLAELEVLRDVRHRNILRLLGCCTKKESTMLLYEYMPNGNLDEFLHPKDNTVNVFDWSTRYKIALGVAQAICYLHHDCAPPIVHRDLKPNNILLDGDMKVRVADFELAKLIRSDEPMSDLAGTYGYIAPKYVDTLQVNEKIDIYSYGVVLMEILSGKRVLDQEFDEGENIVEWVKSKMKGKDGIEGILYKNEGAECSSVREEMVQMLRIALLCTSRNPADRPSMRKAVSILEGIKSKGELPDIFSFDVGEGGANKYFDVCLSVTKTRIKGVNTF* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1074 1012 Gene3D Ribonuclease Inhibitor 157 258 IPR032675 -
Mtr4g1074 1012 SMART LRR_typ_2 267 291 IPR003591 -
Mtr4g1074 1012 SMART LRR_typ_2 195 219 IPR003591 -
Mtr4g1074 1012 SMART LRR_typ_2 123 147 IPR003591 -
Mtr4g1074 1012 SMART LRR_typ_2 456 480 IPR003591 -
Mtr4g1074 1012 SMART LRR_typ_2 315 339 IPR003591 -
Mtr4g1074 1012 SUPERFAMILY Protein kinase-like (PK-like) 697 970 IPR011009 -
Mtr4g1074 1012 Gene3D Ribonuclease Inhibitor 317 630 IPR032675 -
Mtr4g1074 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 820 832 IPR008271 GO:0004672|GO:0006468
Mtr4g1074 1012 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Mtr4g1074 1012 SMART serkin_6 695 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1074 1012 SUPERFAMILY RNI-like 284 594 - -
Mtr4g1074 1012 ProSiteProfiles Protein kinase domain profile. 695 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1074 1012 Gene3D Phosphorylase Kinase; domain 1 696 777 - -
Mtr4g1074 1012 Pfam Protein kinase domain 699 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1074 1012 ProSiteProfiles Leucine-rich repeat profile. 437 460 IPR001611 GO:0005515
Mtr4g1074 1012 Gene3D Ribonuclease Inhibitor 30 149 IPR032675 -
Mtr4g1074 1012 Gene3D Ribonuclease Inhibitor 259 316 IPR032675 -
Mtr4g1074 1012 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR 1 979 - -
Mtr4g1074 1012 Pfam Leucine Rich repeat 99 114 IPR001611 GO:0005515
Mtr4g1074 1012 Pfam Leucine Rich repeat 436 450 IPR001611 GO:0005515
Mtr4g1074 1012 PANTHER UNNAMED PRODUCT 1 979 - -
Mtr4g1074 1012 Gene3D Transferase(Phosphotransferase) domain 1 778 981 - -
Mtr4g1074 1012 ProSitePatterns Protein kinases ATP-binding region signature. 701 724 IPR017441 GO:0005524
Mtr4g1074 1012 Pfam Leucine Rich Repeat 458 478 IPR001611 GO:0005515
Mtr4g1074 1012 SUPERFAMILY L domain-like 57 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1074 Mtr-Chr4 13940104 13943454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1074 4 975 Receptor kinase-like Gene Family AT1G08590 39.563 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr4g1074 Pkinase 3.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1074 - - gmx:100809695 1238.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1074 4 13940104 13943454 Mtr4g1074 4 13940104 13943454 ECH