Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr4g1055 | ATGGCTATGCAACAAATGAGCAGTGCTTCTTCTTCTTCTGCGGTGGCGCCTTTGAAAAAGTCTGATGTTTTTATAAGCTTTCGCGGTGAGGATACTCGTAGAAGCTTCACAAGTCATCTTTATGATGCTTTGAGCAAGAAAGTTATAACCTTTATAGATGACAATGAGCTTCAAAAAGGAGATGAGATATCCTCAGCATTGATCAAAGCCATTGAGGAGTCATATGCATCTATTGTCATCTTCTCAATAGACTATGCTTCCTCAAAATGGTGTTTGAATGAACTCGTCAAGATTCTAGAATGCAAGAAAGATCATGGACAAATTGTGATACCTGTTTTTTACGAAATAGATCCATCACATGTGAGGAATCAAACAGGGAGGTACAGTCAAGCCTTTGCAAAACACGAGCAAGATTTGAAGCACGGCAAAGATATGTTACAAAAATGGAAAGATGCTCTCATTGAAGCAGCCAATTTAGCTGGGTGGCACTCTCAAAATTACAGGACTGAATCAAATTTCATAAAGGACATTGTCGAAGATGTTTTGAAAAAGTTGAATCGTAAACACCCATTTGAAGTTAATAAGGAACTTGTTGGAATTGATAAAAAGTGTGAAGAGGTTGAATCGTTAATGAAAATTGGGTCAAATGATGTTAAAACCCTTGGGTTTTGGGGCATGGGCGGCATAGGAAAGACCACTCTAGCTAAAGATCTATATGCTAAATTGTGTTCTCAATTTGAACGTCACTGCTTCATTGAAAATGTTAGGGAGGAATCAACCAGGCGTGGACTCAATGTTTTACGTAACAAACTTTTTTCTACATTGTTGGAGCTTCGTCTTGATGCACCTTATGTAGAAACCCCAATGTTCATAAGAAGACTTGCATGTGAAAAAAGTTTCATTGTATTGGATGATGTGGCAACCTTAGAGCAAGCAGAATATCTTAACATAGGTAAAAATTGTTTAGGCCCTGGTAGTAGAGTCATCGTCACAACTAGAGATAAGCAAATATGCAGTCAATTTGATGAATGTGCAATATACGAGGTCAAGGGTTTGAACATAGGTGACTCTCTTCAGCTATTCTGTAGGAATGCCTTTGGAGAAAAACATCCTAAAGATGGATATGAGGATCTATCAAAGAGTGCAATTGGCTATTGTAGAGGCAATCCCCTGGCTTTGAAAGTTTTAGGTGCAAATTTTCGTACAAAAAGCAAAGAAGCATGGGCAAGTGAATTGGAAAAGATAAAAAAGATTCCTTATGGGAGAATTCATGATGTGTTAAAATTGAGTTTCGATGACTTAGATCGTACTCAGGAAGACATATTTCTAGATATTGCATGCTTCTCCTACTCAAAATTAACTGATTTTGATTATTTTAGTGATCGAGATTACCTAACAGTTCTATTGAATGCTTGCAATTTTTTTGCGCTAAGTGGGATAGAAGTCCTTCTACATAAAGCACTCATAAATTTAACTTTTACATTTAATAATGAAATAGAAATGCATGATTTGTTAGTAGAAATGGGACGAGAGATTGTTAAGCAAGAATCTCCCAAGAACCCCGGAAGAAGAAGTCGATTGTGGGATCCCGAGGAAGTGTATGATGTACTGAAAAATAACATGGGATCTGAAGTTATTGAAGTTATAATATTCAATATTTCTAAAACTAGGGATCTATACTTGAGCTCTGATTCATTTAAAAACATGACCAACTTAAGATATCTTCATATCACCGATAAGATAAAGCTGTCAAACGGGAGAAAATGCTACAATGTGCACCTCCTTGAAGGTCTTGAATGGTTGTCTGATAAATTGAGGCACCTTTATTGGGAAGCATTCCCACTTGAGTCTTTGCCATCAACCTTTTGTGCCGAATGGCTTGTACAACTTAGCATGCGCCATAGCAAGCTTAAAAAGCTTTGGAATGAAATTCAGAAGCTTGACAATTTGATGATTATTATGCTTGATTACTCCAAAGACTTGATTGAGATCCCAGACTTATCTAAGGCGCCAAAACTTGAACTAGTATCTCTTTCTTATTGCGAGAGTCTCTGCCAACTCCATCCATCCATTTTCACTGCCCCGAAGCTTAGAGAACTATATTTAAAAGGTTGCAAAAAGATTGAAAGCCTGAAAACTAACATTCATTCAAAATCTCTCCGAACACTCGAGCTCACTGATTGTTCATCTCTCAAGGAGTTTTCGGTGACATCAGAGGAAATGATGTCGTTGTCGTTATGTGGCACTGCTATACACGAACTTCCCTCATCAATTTGGCGCAATTGGAAACTCACTTATCGTCTTGATCTAAGTGAATGTAAGAAGCTTAACATTGTTGGGAAGAAGTTAACAAATGATCCAGGATTGGAGTCACTTACAGTTTTGGACCTTTCGGGATGCACACAAATCAATACATCGAACCTGTGGTTCATCCTTGACGGCATACAATCTTTAAAACGATTAAATTTGAGAAAATGCTGCAACTTAGAAACTCTCCCCAACAACATCCAAAGCAATTCAATGTTGCAAAGGCTTAATTTAGATGAATGCAGGAAACTCAAGTCCCTACCTAAGCTTCCTGCATCTTTGCAAAATTTGAGAGCCATTAACTGCCATTATCTGGACACTAATTCCATTCAACGACCAATGCTTGAGAACATTTTACACCGACTCCACATCAACTACGGGCATAGATCAAATAATCTTGATGATTTCTCTTTCCTTCCAGGTACCAAAGTTCCATGCGAGTTTGATTTTCAAACAATAGAGGCGTCAATAGTTATTCCTCCTATTCCAAAACATGGCTTGGGTTGTTTTGTTTTCTGCATTGTTCTCTCTAAGGGCTTAAATGTTAAATACGATAGCGTTTGTTGTACTATCTATGAACACAGAAAAAAAGTCCACCAATGGGATATAGATTGTGGGAGTACTGGGACATTATTTTTAGATCATGTATTGTTAATTTGCTGGTGCGGTAACAAAAAATTGGTTGAGGTAAGGAGTGAAAGTGGAGGTGAACATTACAACCTTTCATTTGAATTCAAATTCAAACATTACGTTGATGACAAGGAAACGTGGTCAACTAAGGGGATAAAGGGTTGTGGGATCTTCCCTGTTTATGGCTTGGAACATAATTTGGGGTTGAATGGTCGAAGCAATAGAAGAGTAGAAATTGTTGAATTACAATCCAATGCTCAAGTCTCTGATGAGTCTGATCAACATTCGCAATTCGATATTGATGAGTTACAACACCGAACAACAATTGGAGGTGAAGTTAGAGTCTCTACACATGAAAATGATAAGACAACATTGTACTAG | 3318 | 0.3761 | MAMQQMSSASSSSAVAPLKKSDVFISFRGEDTRRSFTSHLYDALSKKVITFIDDNELQKGDEISSALIKAIEESYASIVIFSIDYASSKWCLNELVKILECKKDHGQIVIPVFYEIDPSHVRNQTGRYSQAFAKHEQDLKHGKDMLQKWKDALIEAANLAGWHSQNYRTESNFIKDIVEDVLKKLNRKHPFEVNKELVGIDKKCEEVESLMKIGSNDVKTLGFWGMGGIGKTTLAKDLYAKLCSQFERHCFIENVREESTRRGLNVLRNKLFSTLLELRLDAPYVETPMFIRRLACEKSFIVLDDVATLEQAEYLNIGKNCLGPGSRVIVTTRDKQICSQFDECAIYEVKGLNIGDSLQLFCRNAFGEKHPKDGYEDLSKSAIGYCRGNPLALKVLGANFRTKSKEAWASELEKIKKIPYGRIHDVLKLSFDDLDRTQEDIFLDIACFSYSKLTDFDYFSDRDYLTVLLNACNFFALSGIEVLLHKALINLTFTFNNEIEMHDLLVEMGREIVKQESPKNPGRRSRLWDPEEVYDVLKNNMGSEVIEVIIFNISKTRDLYLSSDSFKNMTNLRYLHITDKIKLSNGRKCYNVHLLEGLEWLSDKLRHLYWEAFPLESLPSTFCAEWLVQLSMRHSKLKKLWNEIQKLDNLMIIMLDYSKDLIEIPDLSKAPKLELVSLSYCESLCQLHPSIFTAPKLRELYLKGCKKIESLKTNIHSKSLRTLELTDCSSLKEFSVTSEEMMSLSLCGTAIHELPSSIWRNWKLTYRLDLSECKKLNIVGKKLTNDPGLESLTVLDLSGCTQINTSNLWFILDGIQSLKRLNLRKCCNLETLPNNIQSNSMLQRLNLDECRKLKSLPKLPASLQNLRAINCHYLDTNSIQRPMLENILHRLHINYGHRSNNLDDFSFLPGTKVPCEFDFQTIEASIVIPPIPKHGLGCFVFCIVLSKGLNVKYDSVCCTIYEHRKKVHQWDIDCGSTGTLFLDHVLLICWCGNKKLVEVRSESGGEHYNLSFEFKFKHYVDDKETWSTKGIKGCGIFPVYGLEHNLGLNGRSNRRVEIVELQSNAQVSDESDQHSQFDIDELQHRTTIGGEVRVSTHENDKTTLY* | 1106 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr4g1055 | 1105 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 14 | 1087 | - | - | |
| Mtr4g1055 | 1105 | ProSiteProfiles | TIR domain profile. | 19 | 185 | IPR000157 | GO:0007165 | |
| Mtr4g1055 | 1105 | Gene3D | Ribonuclease Inhibitor | 739 | 913 | IPR032675 | - | |
| Mtr4g1055 | 1105 | SUPERFAMILY | L domain-like | 501 | 890 | - | - | |
| Mtr4g1055 | 1105 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 14 | 1087 | IPR044974 | GO:0006952 | |
| Mtr4g1055 | 1105 | SMART | till_3 | 20 | 159 | IPR000157 | GO:0007165 | |
| Mtr4g1055 | 1105 | Gene3D | Ribonuclease Inhibitor | 528 | 738 | IPR032675 | - | |
| Mtr4g1055 | 1105 | Pfam | Leucine Rich Repeat | 627 | 645 | IPR011713 | - | |
| Mtr4g1055 | 1105 | Pfam | NB-ARC domain | 208 | 421 | IPR002182 | GO:0043531 | |
| Mtr4g1055 | 1105 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 12 | 162 | IPR035897 | - | |
| Mtr4g1055 | 1105 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 179 | 445 | IPR027417 | - | |
| Mtr4g1055 | 1105 | Gene3D | - | 17 | 185 | IPR035897 | - | |
| Mtr4g1055 | 1105 | Gene3D | - | 352 | 435 | IPR042197 | - | |
| Mtr4g1055 | 1105 | PRINTS | Disease resistance protein signature | 220 | 235 | - | - | |
| Mtr4g1055 | 1105 | PRINTS | Disease resistance protein signature | 293 | 307 | - | - | |
| Mtr4g1055 | 1105 | PRINTS | Disease resistance protein signature | 386 | 400 | - | - | |
| Mtr4g1055 | 1105 | PRINTS | Disease resistance protein signature | 787 | 803 | - | - | |
| Mtr4g1055 | 1105 | Pfam | TIR domain | 22 | 199 | IPR000157 | GO:0007165 | |
| Mtr4g1055 | 1105 | Gene3D | - | 186 | 346 | IPR027417 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr4g1055 | Mtr-Chr4 | 13673755 | 13678826 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr4g1055 | 19 | 870 | WRKY Transcription Factor Family | AT4G12020 | 30.884 | 1.46e-93 | 327 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr4g1055 | - | - | mtr:MTR_2g037140 | 1315.06 |