Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1046 ATGGAGGCTTTTTCTTCAAAGATGCTTCTAATAATTTTTGCCTTTAGTTTCATTACACACTTTATCCAAGCAATTGAAAGACCATACCAACAAGCAAACACATTATTCATTAAAAATTCTTGCAGCTCTACAACTTATCCAAGACTATGCTACACCTCCCTAGTGAAGCACGCTGATTCCATTCAAACGAATCACGTGCTTTTAACATGTACGGCCCTAAACGTGACTCTTGCGTCCGCGAAATCAACATCGGCTATGATATCAACTCTCTCAAAAAGCCAGGGGCTGAAGCCAAGAGAGGCTGCAGCTATGAAGGATTGCGTCGAAGAGCTGAGTGACTCCGTGGATGAACTACGAAGGTCTATCGGTGAAATGAGTCGCCTTAGGACTTCAAATTTCGAGTTAACAATGAGTGATGTACAAACTTGGGTCAGTGCCGCTTTGACGGATGAGAGTACTTGTACCGACGGATTCCAAGAGGTTAATGCTCCGGGTAATGTTCAGACAACAGTGAGAGGGAAAATTGTGCAAGTAGCTCAATTGACTAGCAATGCTTTGGCTTTGATAAATAAACTTGCCACTTCACATGAATGA 594 0.4242 MEAFSSKMLLIIFAFSFITHFIQAIERPYQQANTLFIKNSCSSTTYPRLCYTSLVKHADSIQTNHVLLTCTALNVTLASAKSTSAMISTLSKSQGLKPREAAAMKDCVEELSDSVDELRRSIGEMSRLRTSNFELTMSDVQTWVSAALTDESTCTDGFQEVNAPGNVQTTVRGKIVQVAQLTSNALALINKLATSHE* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1046 197 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 192 IPR035513 -
Mtr4g1046 197 PANTHER 21 KDA PROTEIN-LIKE 4 195 - -
Mtr4g1046 197 Coils Coil 108 128 - -
Mtr4g1046 197 CDD PMEI-like_3 40 194 - -
Mtr4g1046 197 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 194 IPR035513 -
Mtr4g1046 197 SMART PMEI_2 32 188 IPR006501 GO:0004857
Mtr4g1046 197 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 192 IPR006501 GO:0004857
Mtr4g1046 197 Pfam Plant invertase/pectin methylesterase inhibitor 36 188 IPR006501 GO:0004857
Mtr4g1046 197 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1046 Mtr-Chr4 13487675 13488562 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1046 37 189 Carbohydrate Esterase AT5G53370 33.766 1.37e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1046 - - gmx:100305537 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1046 4 13487675 13488562 Mtr4g1046 4 13487675 13488562 ECH