Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1041 ATGTCTTCCAACCTTCCCCCACCGGAAAATGATCCACCACCAGCGACATCGTCGCCGGTATCCGCCAAATCCAGAACTCTTCAGAAATTCCCTCCCATTGTAAACCGCCGCACCGCGACATTATCATCGAACAATGTAGACGACGAATGCAAAGAAGAGAATAATAAGAACAAGAATCATGACAATGAGGAGGAAAGTGAAGAAGAAGAAGAAGAAGAAGAAGACGTTCTCGTAACTGAAAGTGAATTCGAACGTGCTGAATGTTCTTATTCTTCTTCCATTTTGCAAGCTTCGTCGTTAGGTCTTAATCAAATTCGAACGCGATTCTCTTCGCCTCTTCGTCATTCTTCTTCTGCTGGGGGAAAAGTTCATTGGAATCAATCCAAATCGTTGAAAGCTCGTTCACAACTCCTCATATTGGAGGGAAATCATGCAGCTTATGCCAAAGATTTTCAATCCCCACGTTATCAGGAAATTCTTCGACTTACAAGTGGTAAGAAAAGGAAAAACCGGCCTGATATTAAAAGCTTTTCCCATGAACTTAACTCCAAAGGAGTTAGGCCTTTTCCAGTCTGGAAACATCGTGCCTTTGGGCAGGAAATCATGGTGGAGATTAGAGCTAAGTTTGAAAAACTAAAGGAAGAAGTTGATTCTGATTTGGGTGGTTTTGCTGGTGATTTGGTGGGTACTCTTGAAAAAATACCTGGGTCTCATCCTGAATGGAAAGAGGGGTTGGAAGATTTGTTGGTTGTTGCTCGACAATGTGCAAAGATGACAGCGGCTGAGTTTTGGATCAACTGTGAAACTATTGTTCAAAAACTAGATGATAAACGTCAAGATATACCGGTGGGGATCCTCAAGCAAGCACATACGCGCCTGTTGTTTATTCTCTCTAGGTGCACTCGTCTAGTGCAATTCCAGAAGGAAAGTGTTAAAGAACAAGATCACATTCTTGGTCTTCACCAACTCAGCGATCTTGGAGTATATTCCGAGCAAATTATGAAGGCTGAAGAGAGTTGCGGTTTTCCACCTAGTGACCATGAGATGGCTGAGAAGCTGATAAAAAAGTCACATGGGAAAGAGCAAGACAAACCGATTACAAAACAAAGTCAAGCTGATCAACATGCAAGTGTTGTGATTGATAATGTGGAAGTTACTACGGCAAGTACTGATTCGACTCCTGGAAGCAGCTATAAGATGGCTTCTTGGAGAAAGCTTCCATCTGCTGCGGAGAAAAATCGTGTAGGTCAAGATGCAGTAAAAGATGAAAATGCTGAAAACTGGGATACTTTGTCATGTCACCCTGATCAACATTCACAGCCGTCATCTAGAACGCGGAGGCCTTCTTGGGGATATTGGGGAGATCAGCAAAATCTATTACATGATGATTCAATGATCTGCAGGATTTGTGAGGTTGAAATACCAATATTACATGTGGAGGAGCATTCTCGAATATGTACAATAGCTGATAAATGTGATTTGAAAGGCTTAAATGTAAATGAACGGCTTGAAAGAGTTGCCGAAACAATTGAAATGTTACTTGATTCCTTGACACCAACATCAAGTTTGCATGAAGAGTTCAATGAGTTATCTCTAGAAAGAAATAACATGTCATCTAGATGCTCTGAAGATATGCTTGACCTTGCTCCTGACAATACTTTTGTTGCGGATGATCTAAACCTTTCACGGGAAATATCATGCGAGGCTCATAGCTTAAAACCTGATCATGGCGCAAAGATATCTTCTCCTGAAAGCTTGACACCGCGATCACCGTTGATTACACCCAGAACAAGTCAGATAGAAATGTTACTAAGTGTAAGTGGAAGAAGACCAATATCTGAACTTGAGAGTTACGACCAGATAAACAAGCTAGTTGAAATAGCTCGTGCTGTTGCAAATGCGAACAGCTGTGACGAAAGTGCTTTCCAGTATATCGTTGATTGCGTGGAAGACCTGAGATGTGTAATTCAGAACAGAAAAGAGGATGCACTTATTGTGGATACTTTCGGTCGACGAATAGAGAAACTTTTGCAAGAAAAATATTTAACTCTTTGTGAGCAAATACACGATGAAAGGGCAGAATCATCAAATAGCATGGCTGATGAAGAGAGTTCAGTGGATGATGATACAATCCGTAGCCTTCGTGCTAGCCCAATTAATGGTTTTTCTAAGGACAGAACCTCTATTGAAGATTTTGAAATAATAAAACCAATAAGCAGAGGTGCGTTTGGACGAGTTTTTCTTGCCCAGAAAAGATCGACTGGTGATTTATTTGCTATTAAGGTTCTGAAAAAGGCAGATATGATTCGTAAAAATGCAGTTGAAGGTATTTTGGCTGAGCGAGACATTCTTATATCTGTTCGAAATCCTTTTGTGGTCCGATTTTACTATTCTTTCACATGTAAAGAAAATCTGTATTTGGTTATGGAGTACTTAAATGGTGGAGATCTCTATTCTATGTTGAGAAACTTAGGTTGCTTAGATGAAGATATGGCTCGTGTATATATTGCAGAAGTTGTTCTTGCGTTGGAGTATTTGCATTCGCAAAGTATAATTCACAGAGACTTAAAGCCAGATAACTTACTGATCGGACAAGATGGTCATATTAAGTTGACAGACTTTGGACTCTCAAAAGTTGGTCTCATCAACAGCACGGAGGATTTATCAGCACCCGCATCTTTCACTAATGGTTTTTTAGTCGATGATGAACCAAAACCTCGACATGTTTCAAAAAGGGAGGCACGTCAACAACAATCAATAGTTGGCACTCCAGATTATTTGGCACCCGAAATACTTTTGGGCATGGGACATGGTACAACTGCAGATTGGTGGTCTGTGGGTGTCATACTTTACGAGCTTCTTGTGGGTATTCCACCTTTTAATGCAGATCATGCACAGCAAATATTTGATAACATAATTAACAGAGACATACAATGGCCAAAGTATCCTGAGGAGATTAGCTTTGAAGCATACGATTTGATGAACAAATTACTGATCGAAAACCCAGTCCAAAGATTAGGTGTAACAGGAGCTACAGAAGTTAAACGCCATGCTTTCTTCAAGGATGTTAATTGGGATACGCTAGCAAGGCAGAAGGCTATGTTCATACCATCAGCTGAAGCTCACGATACAAGTTATTTCATGAGCCGCTACATTTGGAATGTAGAGGATGATGAACATTGTGCTGGAGGTAGTGATTTTTATGACCATTCTGAAACATCCAGCAGTGGTTCAGGAAGCGATTCATTAGATGAAGATGGCGATGAATGCGCTAGTTTAACAGAATTCAGTAATTCAGCTCTTGGCGTGCAGTACTCGTTTAGTAACTTCTCGTTTAAGAATATAAGTCAGCTAGTGTCTATCAATATGATGCATATCTCCAAAGAAACACCGGACGACTCCAACCCATCTGTGTCGTGA 3420 0.4064 MSSNLPPPENDPPPATSSPVSAKSRTLQKFPPIVNRRTATLSSNNVDDECKEENNKNKNHDNEEESEEEEEEEEDVLVTESEFERAECSYSSSILQASSLGLNQIRTRFSSPLRHSSSAGGKVHWNQSKSLKARSQLLILEGNHAAYAKDFQSPRYQEILRLTSGKKRKNRPDIKSFSHELNSKGVRPFPVWKHRAFGQEIMVEIRAKFEKLKEEVDSDLGGFAGDLVGTLEKIPGSHPEWKEGLEDLLVVARQCAKMTAAEFWINCETIVQKLDDKRQDIPVGILKQAHTRLLFILSRCTRLVQFQKESVKEQDHILGLHQLSDLGVYSEQIMKAEESCGFPPSDHEMAEKLIKKSHGKEQDKPITKQSQADQHASVVIDNVEVTTASTDSTPGSSYKMASWRKLPSAAEKNRVGQDAVKDENAENWDTLSCHPDQHSQPSSRTRRPSWGYWGDQQNLLHDDSMICRICEVEIPILHVEEHSRICTIADKCDLKGLNVNERLERVAETIEMLLDSLTPTSSLHEEFNELSLERNNMSSRCSEDMLDLAPDNTFVADDLNLSREISCEAHSLKPDHGAKISSPESLTPRSPLITPRTSQIEMLLSVSGRRPISELESYDQINKLVEIARAVANANSCDESAFQYIVDCVEDLRCVIQNRKEDALIVDTFGRRIEKLLQEKYLTLCEQIHDERAESSNSMADEESSVDDDTIRSLRASPINGFSKDRTSIEDFEIIKPISRGAFGRVFLAQKRSTGDLFAIKVLKKADMIRKNAVEGILAERDILISVRNPFVVRFYYSFTCKENLYLVMEYLNGGDLYSMLRNLGCLDEDMARVYIAEVVLALEYLHSQSIIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTEDLSAPASFTNGFLVDDEPKPRHVSKREARQQQSIVGTPDYLAPEILLGMGHGTTADWWSVGVILYELLVGIPPFNADHAQQIFDNIINRDIQWPKYPEEISFEAYDLMNKLLIENPVQRLGVTGATEVKRHAFFKDVNWDTLARQKAMFIPSAEAHDTSYFMSRYIWNVEDDEHCAGGSDFYDHSETSSSGSGSDSLDEDGDECASLTEFSNSALGVQYSFSNFSFKNISQLVSINMMHISKETPDDSNPSVS* 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1041 1139 MobiDBLite consensus disorder prediction 356 450 - -
Mtr4g1041 1139 CDD STKc_MAST_like 738 1025 - -
Mtr4g1041 1139 MobiDBLite consensus disorder prediction 1 82 - -
Mtr4g1041 1139 ProSiteProfiles AGC-kinase C-terminal domain profile. 1021 1122 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mtr4g1041 1139 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 23 1138 - -
Mtr4g1041 1139 Gene3D Transferase(Phosphotransferase) domain 1 816 1038 - -
Mtr4g1041 1139 Pfam Protein kinase domain 732 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1041 1139 SMART serkin_6 732 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1041 1139 MobiDBLite consensus disorder prediction 1 15 - -
Mtr4g1041 1139 MobiDBLite consensus disorder prediction 573 592 - -
Mtr4g1041 1139 MobiDBLite consensus disorder prediction 1064 1089 - -
Mtr4g1041 1139 MobiDBLite consensus disorder prediction 46 63 - -
Mtr4g1041 1139 MobiDBLite consensus disorder prediction 369 399 - -
Mtr4g1041 1139 MobiDBLite consensus disorder prediction 415 429 - -
Mtr4g1041 1139 Coils Coil 43 82 - -
Mtr4g1041 1139 ProSiteProfiles Protein kinase domain profile. 732 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1041 1139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 851 863 IPR008271 GO:0004672|GO:0006468
Mtr4g1041 1139 MobiDBLite consensus disorder prediction 31 45 - -
Mtr4g1041 1139 MobiDBLite consensus disorder prediction 64 80 - -
Mtr4g1041 1139 Gene3D Phosphorylase Kinase; domain 1 730 1047 - -
Mtr4g1041 1139 PANTHER SERINE/THREONINE-PROTEIN KINASE 23 1138 - -
Mtr4g1041 1139 SUPERFAMILY Protein kinase-like (PK-like) 729 1046 IPR011009 -
Mtr4g1041 1139 MobiDBLite consensus disorder prediction 430 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1041 Mtr-Chr4 13420333 13429681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1041 1 1138 AGC Kinase Gene Family AT5G62310 58.409 0.0 1295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Mtr4g1041 Pkinase 4.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1041 - - gmx:100806311 1569.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1041 4 13420333 13429681 Mtr4g1041 4 13420333 13429681 ECH