Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1029 ATGAGTTCTTCTAATGGCGGTGTGCCACCGGGGTTTCGATTTCATCCGACCGATGAAGAGTTACTTCATTACTATTTGAAGAAGAAGGTGTCGTTTCAGAAATTTGATATGGATGTTATAAGAGAGGTGGACTTGAACAAGATGGAACCTTGGGATTTGCAAGAAAAATGTAAGATTGGTTCAACACCACAAAACGAGTGGTATTTCTTCAGTCACAAGGACAGAAAGTACCCAACAGGGTCAAGGACTAATAGAGCAACAAATGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAGTGCATTAGGAATACCTACAAGAAAATTGGAATGAGAAAGACTCTTGTGTTCTACAAAGGTAGAGCTCCTCATGGACAAAAGACTGATTGGATTATGCATGAATACCGTCTAGAAGATGGCAATGATCCTACCAATGAAGATGGATGGGTGGTATGCAGGGTGTTCAAGAAGAAAAACCTATTCAAGATTGGGAGTGAAGGTGGATCCACACACAATCAAGATCAACAAATGAACAATATTTCCTCAACGAATCAACGCTCCTTCATGCAAAGAGAAAATCAATACTTACTACATCAACAACAACATCAAAACCACCATAGGAACCTATCCGGTTTCGAGCTCGAAAAACCCGAGCTCAGTCTCCATTATCAACACTTGCAAAACTCTCAATACTCACTCTTCCACTCCCAACCTCAGCCTCAACCTCTACAGGCTAACTTTGATTACTCATATGCATCACCTTTACAGACAGAACAACCTATTATAGTGAAACAACTTATGACAAACCCTAGAGATTGTGAGAGTGGAAGTGATGGTTTGAGATATCAAGTTTCAGAATCTGGCATTGAAGTTGGCTCTTGTGAACCACCTCAAGAAATGGGTGTAGGAAGGAGTGGTGAAGGAATGAATGAATGGGGAATGCTTGATAGGCTTGTGAATGAAGACTCCACAAAAGAGGCTACAAGGTTTGAGGATGCTAATCCCAATCAAATCAATCAGCTTTCATTGAGAGGAGAGATGGATTTTTGGGGCTATGGAAAACAATGA 1065 0.4094 MSSSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQEKCKIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNTYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDGNDPTNEDGWVVCRVFKKKNLFKIGSEGGSTHNQDQQMNNISSTNQRSFMQRENQYLLHQQQHQNHHRNLSGFELEKPELSLHYQHLQNSQYSLFHSQPQPQPLQANFDYSYASPLQTEQPIIVKQLMTNPRDCESGSDGLRYQVSESGIEVGSCEPPQEMGVGRSGEGMNEWGMLDRLVNEDSTKEATRFEDANPNQINQLSLRGEMDFWGYGKQ* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1029 354 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Mtr4g1029 354 ProSiteProfiles NAC domain profile. 8 156 IPR003441 GO:0003677|GO:0006355
Mtr4g1029 354 SUPERFAMILY NAC domain 7 156 IPR036093 GO:0003677|GO:0006355
Mtr4g1029 354 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Mtr4g1029 354 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 249 - -
Mtr4g1029 354 PANTHER PROTEIN BEARSKIN2-LIKE 5 249 IPR033519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1029 Mtr-Chr4 13032407 13035866 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1029 1 350 NAC Transcription Factor Family AT1G33280 56.233 3.32e-128 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr4g1029 NAM 2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1029 - - gmx:100804181 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1029 4 13032407 13035866 Mtr4g1029 4 13032407 13035866 ECH