Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1026 ATGTCCATCACAAAGGAATCTGAATCTCAATCTCAAGCAGAAGCTCGACCCGGCTCGATAACAAAACGAAGCTCGAGAAAAGGTGACTCCGTATTTCACGGAGTCAGGAAACGTAGCTGGGGACGCTACGTTTCTGAGATAAGGCTGCCAGGTCAGAAGACTCGAATATGGCTTGGATCATTCGAGTCAGCTGAAATGGCAGCCCGTGCTTATGACTCAGCAGCTTTTTTCTTGAAAGGAAATTCAGCTAGCCTTAATTTTCCTGAAGAAGTTGAGTTTCTACCACGTCCTCTTTCTTCTTCTAGGAGAGATATTCAATCTGCTGCTTCTAAAGCAGCTCATCAACGAAGCCACCACCATCAACAACAAGAAGAACAATTACGTGGAGTTACACCTTCTTCTTCTTCTTCAACAAGAATGAATGAAAATAATATTATCAATAATAGTGATGATAATATTATTAGTGGAAATAATAATGTTAATGATTTTTCCATTGAGATGATGGAATGGTGGAAAGAAGAAGAGTGTGTTTCGACGACGTCGTTTTGGGATGTGGAAGATGCTCCTCTAATGAGCCCAACAAGGGTGGGGTCCATTTTTGGAGATATGATGACATGGAACGAAGTGTTCAATTTCAATGATGATAATTCTTTAGTATATGTACCGTAG 669 0.4066 MSITKESESQSQAEARPGSITKRSSRKGDSVFHGVRKRSWGRYVSEIRLPGQKTRIWLGSFESAEMAARAYDSAAFFLKGNSASLNFPEEVEFLPRPLSSSRRDIQSAASKAAHQRSHHHQQQEEQLRGVTPSSSSSTRMNENNIINNSDDNIISGNNNVNDFSIEMMEWWKEEECVSTTSFWDVEDAPLMSPTRVGSIFGDMMTWNEVFNFNDDNSLVYVP* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1026 222 MobiDBLite consensus disorder prediction 98 152 - -
Mtr4g1026 222 Gene3D AP2/ERF domain 31 90 IPR036955 GO:0003700|GO:0006355
Mtr4g1026 222 MobiDBLite consensus disorder prediction 1 19 - -
Mtr4g1026 222 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
Mtr4g1026 222 MobiDBLite consensus disorder prediction 126 152 - -
Mtr4g1026 222 Pfam AP2 domain 31 80 IPR001471 GO:0003700|GO:0006355
Mtr4g1026 222 MobiDBLite consensus disorder prediction 1 31 - -
Mtr4g1026 222 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 164 - -
Mtr4g1026 222 CDD AP2 30 89 IPR001471 GO:0003700|GO:0006355
Mtr4g1026 222 SUPERFAMILY DNA-binding domain 30 89 IPR016177 GO:0003677
Mtr4g1026 222 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF036-LIKE 11 164 - -
Mtr4g1026 222 SMART rav1_2 31 94 IPR001471 GO:0003700|GO:0006355
Mtr4g1026 222 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Mtr4g1026 222 PRINTS Ethylene responsive element binding protein signature 54 70 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1026 Mtr-Chr4 12958596 12959511 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1026 31 106 AP2-EREBP Transcription Factor Family AT1G01250 68.421 2.53e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mtr4g1026 AP2 7.6e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1026 K09286 - gmx:100783790 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1026 4 12958596 12959511 Mtr4g1026 4 12958596 12959511 ECH