Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1018 ATGGCTAAGATTTCAAAATTCTTTCAATTTTTCAACTTCATTTCAATTTTGTTACTCACATCACACTATATTTTCCCTCCATGTATGTCCCTAACAAATGAAACACAAGCCCTTCTTGATTTCAAGAGTCATTTGAATGACTCATTGAACACTCTAGCTTCATGGAATGAATCAAAATCACCATGCAACTTTCTTGGAATTACATGTGATCCAAGAAATTTGAAAGTCAGAGAAATCTCATTGGATGGTGATTCCCTATCCGGCGAAATTTTTCCATCAATCACAACTCTTGATAGCCTAGAAGTTCTTTCATTACCATCCAATTCCATTTCCGGAAAAATTCCATCAGAAGTAACAAAATTTATAAACCTCAGAGTCTTGAATCTATCAGGAAATGAACTTATTGGAGCAATTCCAGATTTGTCCGGTTTGAAAAATCTTCGAGTTCTTGATCTTTCGGCCAACTACTTTTCCGGTAGATTCCCTAGCTGGATAGGGAACTTAACCGGACTAGTATCGCTTGGTCTCGGAGAAAATCTTTACACTGAGAGTGTGATACCAGAGAGTCTTGGAGATTTGAAGAATTTGACTTGGCTTTATCTTGGTGGTTCTCATTTGAAAGGAGAGATTCCAGAATCAATATATGAAATGGAAGCATTGAAGACTTTGGATTTGTCAAGAAACAAGTTATCTGGCAAAATCTCTAGATCGATTTTGAAGTTGAAAAATGTTTCCAAAATTGAGTTGTTTTCGAACAATTTGACGGGCGAAATACCAGAAGAACTTGCAAATTTAACCAATTTGCAAGAGATTGATCTTTCTGCAAATAAATTTTTTGGTAAGTTGCCTAAGCAGATTGGTGAAATGAAGAACTTGGTTGTTTTTCAGCTGTATGATAACAGCTTTTCTGGTCAAATTCCTGCTGGATTTGGTAAAATGGAAAATCTCACAGGTTTTTCGGTTTACAGAAACAGTTTCAACGGTACAATTCCGGAGGATTTTGGCCGATTTTCTCCGCTCAAAAGTATCGACATATCAGAGAATCAATTTTCAGGTTTTTTCCCAAAGTACTTATGTGAGAAAAGAAAGTTAACACTTTTGCTTGCATTGCAAAACAATTTCTCTGGAAATTTTTCTGAGTCTTATGCTTCATGCAAGTCACTAGAAAGATTAAGGATCAGTAATAATTCTTTGTCTGGAAAAATTCCGAAAGGTGTTTGGTCACTTCCAAATGCAAAGATAATTGATTTAGGTTTTAATAATTTCAGTGGTGAAGTATCTTCAGAAATTGGTTATTCAACAAATTTAAGTGAAATTGTTTTGATGAATAACAAGTTTTCAGGTAAAGTTCCTTCCGAAATCGGAAAATTGGTGAATTTGGAGAAACTTTACTTGAGTAACAACAATTTCTCTGGTGATATTCCACGTGAAATTGGATTGTTAAAACAGTTATCTACTTTGCATTTGGAAGAGAATTCGTTAACTGGTGTAATACCGAAAGAATTAGGCCATTGTTCGAGGTTGGTGGATTTGAATCTTGCCTTGAATTCTCTATCGGGAAATATTCCGAACTCGGTTTCGCTTATGAGTTCATTGAATTCTTTGAATTTATCAAGAAACAAATTAACAGGTACAATTCCTGATAATTTGGAGAAAATGAAACTAAGCTCAGTGGATTTTTCTCAAAATTCTCTTTCTGGTGGAATTCCATTTGGCATTTTGATTATTGGTGGAGAGAAAGCTTTTGTTGGAAACAAAGAATTATGTGTTGAGCAAATTCCGAAAACTTCAATGAATTCTGATTTGAAGATTTGTGATAAAGATCATGGTCATAGAAGAGGGGTCTTTGCTTATAAATATTTTCTGCTCTTTTTCATTGCTGTTATCTTCGCTGCTGCGATCGTGATCCATAGATGCATGAAGAATCGAAAAGAAAAGAATTTACAAAAAGGCGAAAAGGAAGCAAGTCAAAAATGGAAACAAGCATCTTTTCACCAAGTGGATATTGATGCAGATGAAGTAAGTCATTTGGATGACGATAATTTAATCGGCTACGGTGGCACCGGAAAAGTTTATCGAGTCAAGTTGAAGAAAACCGGCATAGTGGTGGCCGTAAAGCAACTAGAGAAAGGCTATGGTGTGAAGATTTTAGCTGCTGAGATGGAGATTTTAGCGAAAATTAGGCACAAAAATATACTTAAACTTTATGCTTGTTTTCTTAAAGGAGGGTCCAATCTCTTGGTTTTTGAGTATATGCCAAATGGTAATCTTTTCCAAGCTCTTCATAGAGAGGTAAAAGATGAGATGGTTACATTTGATTGGAATCAGAGGTATAAAATTGCTTTGGGAGGTGCAAAAGGAATTTGCTATTTGCACCATGATTGTTCACCACCTGTTATTCATAGGGATATAAAATCAAGCAACATTTTGCTTGATGCAAATTATGAAGCAAAAATTGCTGATTTTGGTGTTGCAAGATTTGCTGAAAAATCTCAGATGGGTTATAGCGTTTTTGCTGGCACACATGGTTATATTGCTCCAGAACTAGCATATACAACGGAAATAACCGAAAAGAGCGACGTATACAGCTTCGGAGTGGTGCTATTAGAGTTAGTATCTGGAAGAGAACCTGTTGAAGAAGAATATGGAGAAGCAAAAGACATTGTTCATTGGGTTATGAGTAATCTCAACGATCGCGAAAGTGTACTCAGCATTCTTGATGGTAGAGTTGCATCAACACATTGTGTCGAAGATATGATTAAAGTGTTGAAGATCGGTATTAAGTGTACTACTAAGCTTCCAACTTTGCGTCCAACTATGAGAGATGTTGTTAAGATGCTTGTTGATTCTGAACCTTGCAAGAAGAAATCGAAACCATGTGGTTTTGAGAAAAATGCAGGCTCTTTTGACTAG 2913 0.3581 MAKISKFFQFFNFISILLLTSHYIFPPCMSLTNETQALLDFKSHLNDSLNTLASWNESKSPCNFLGITCDPRNLKVREISLDGDSLSGEIFPSITTLDSLEVLSLPSNSISGKIPSEVTKFINLRVLNLSGNELIGAIPDLSGLKNLRVLDLSANYFSGRFPSWIGNLTGLVSLGLGENLYTESVIPESLGDLKNLTWLYLGGSHLKGEIPESIYEMEALKTLDLSRNKLSGKISRSILKLKNVSKIELFSNNLTGEIPEELANLTNLQEIDLSANKFFGKLPKQIGEMKNLVVFQLYDNSFSGQIPAGFGKMENLTGFSVYRNSFNGTIPEDFGRFSPLKSIDISENQFSGFFPKYLCEKRKLTLLLALQNNFSGNFSESYASCKSLERLRISNNSLSGKIPKGVWSLPNAKIIDLGFNNFSGEVSSEIGYSTNLSEIVLMNNKFSGKVPSEIGKLVNLEKLYLSNNNFSGDIPREIGLLKQLSTLHLEENSLTGVIPKELGHCSRLVDLNLALNSLSGNIPNSVSLMSSLNSLNLSRNKLTGTIPDNLEKMKLSSVDFSQNSLSGGIPFGILIIGGEKAFVGNKELCVEQIPKTSMNSDLKICDKDHGHRRGVFAYKYFLLFFIAVIFAAAIVIHRCMKNRKEKNLQKGEKEASQKWKQASFHQVDIDADEVSHLDDDNLIGYGGTGKVYRVKLKKTGIVVAVKQLEKGYGVKILAAEMEILAKIRHKNILKLYACFLKGGSNLLVFEYMPNGNLFQALHREVKDEMVTFDWNQRYKIALGGAKGICYLHHDCSPPVIHRDIKSSNILLDANYEAKIADFGVARFAEKSQMGYSVFAGTHGYIAPELAYTTEITEKSDVYSFGVVLLELVSGREPVEEEYGEAKDIVHWVMSNLNDRESVLSILDGRVASTHCVEDMIKVLKIGIKCTTKLPTLRPTMRDVVKMLVDSEPCKKKSKPCGFEKNAGSFD* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1018 970 Pfam Leucine rich repeat 146 206 IPR001611 GO:0005515
Mtr4g1018 970 Pfam Leucine rich repeat 219 278 IPR001611 GO:0005515
Mtr4g1018 970 Pfam Leucine Rich Repeat 459 478 IPR001611 GO:0005515
Mtr4g1018 970 SUPERFAMILY L domain-like 54 308 - -
Mtr4g1018 970 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 959 - -
Mtr4g1018 970 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR2 12 959 - -
Mtr4g1018 970 Pfam Leucine Rich repeats (2 copies) 99 142 IPR025875 -
Mtr4g1018 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Mtr4g1018 970 SUPERFAMILY Protein kinase-like (PK-like) 674 947 IPR011009 -
Mtr4g1018 970 Pfam Protein kinase domain 680 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1018 970 Gene3D Ribonuclease Inhibitor 184 241 IPR032675 -
Mtr4g1018 970 Gene3D Ribonuclease Inhibitor 242 315 IPR032675 -
Mtr4g1018 970 Gene3D Ribonuclease Inhibitor 30 183 IPR032675 -
Mtr4g1018 970 ProSitePatterns Protein kinases ATP-binding region signature. 683 706 IPR017441 GO:0005524
Mtr4g1018 970 Gene3D Transferase(Phosphotransferase) domain 1 752 962 - -
Mtr4g1018 970 ProSiteProfiles Leucine-rich repeat profile. 459 481 IPR001611 GO:0005515
Mtr4g1018 970 CDD STKc_IRAK 683 947 - -
Mtr4g1018 970 ProSiteProfiles Leucine-rich repeat profile. 123 145 IPR001611 GO:0005515
Mtr4g1018 970 ProSiteProfiles Protein kinase domain profile. 677 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1018 970 PRINTS Leucine-rich repeat signature 220 233 - -
Mtr4g1018 970 PRINTS Leucine-rich repeat signature 529 542 - -
Mtr4g1018 970 Gene3D Phosphorylase Kinase; domain 1 636 751 - -
Mtr4g1018 970 Gene3D Ribonuclease Inhibitor 316 600 IPR032675 -
Mtr4g1018 970 SMART serkin_6 677 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1018 970 SUPERFAMILY RNI-like 247 567 - -
Mtr4g1018 970 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Mtr4g1018 970 SMART LRR_typ_2 217 241 IPR003591 -
Mtr4g1018 970 SMART LRR_typ_2 265 289 IPR003591 -
Mtr4g1018 970 SMART LRR_typ_2 529 553 IPR003591 -
Mtr4g1018 970 SMART LRR_typ_2 457 480 IPR003591 -
Mtr4g1018 970 SMART LRR_typ_2 144 168 IPR003591 -
Mtr4g1018 970 SMART LRR_typ_2 481 505 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1018 Mtr-Chr4 12816781 12821604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1018 23 958 Receptor kinase-like Gene Family AT1G72180 54.430 0.0 1008
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr4g1018 Pkinase 8.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1018 - - cam:101508379 1376.3