Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1017 ATGGCTTTTCACCATAAACACTTGTTTATTTCTTTATATTTTTTCCTTTCTTTTATTCTTCTTCCTATCATAAACACACTTTCAACTGTTTCAATTTCTCATACTTCAAATTCAAACCAAACTTTAATTTGTGTTTTACAATCTCAAAACCAACAAAAACATTCAAACCTTAATTGTACTAGTTTTTCTCCTAGTATAAGTTTTGGTACTAAACTTGAACTGAATTCTAATGTTTCATATTCTCAAATTGTTGGTGGAAATGGTTTTTTATGTGGTTTAACATCATCATCAAATTCTTCAAATTCAATCATCGTATGTTGGAGATTTTCTAACTCTTCAAATTCAAGTACTATTGTTTCCTTTAAACGACTCTATCATGGACCCGTTATCGAAGATATCGATAGCGGGAATTCCCATGTCTGCGGACTCGTTAAAGGGAACAATGGTTTTCGCCTCGAGTGTTGGCAATGGAGAGGCTTCAATTCAAGCTCCGGGATGAACATGAACATGTCAAATATCGCGGTGGGAGAGAATTTTGTATGTGGGCTATTAGAAAATGGAAAAGGGAATGTTGTTACTTGCAAAGGAAGTAACAATAGAGTTGTTGGAAATGAACCAAAGAATGGTGGAAATTATTCTGTTATTGAAGCTGGTTCAAACCATGTTTGTGCTATCTCAAATGATGGTGGTTTGGATTGTTGGGGTGATATGGTTGGTGAGAAACCAAAGGGGAGATTCATTTCATTGGCTTTGGGGGAAAATAGAAGTTGTGCACTTGGGTATGATGGAATTGTTACTTGTTGGGGTTTGAATAATTTCACCTTGCCATTGACTCTAAAAAACACATTTTTTGAGTCAATTGTGGCTAAAAAGAGTGTTTTTTGTGGTGTTTTGTCTTCTAATTATTCTTTGTTTTGTTGGGGCAATGAAGTTTTTGAGTCAAAAAAAGTCTTTGATAATGTGCTTCCTGGACCTTGTAAGAATCAATGTCCATGTGGACCTTTATCAGATTCTGCTAAGCTTTGTGTCTCACCAGCCATCATTTGCAAACCTTGTTCACCATCATTTGAAATTCCAACATTACCACCTTCGAATCCACCGTCTCAAATGCCCGAAAATCCATCGAAAAGTGGTACATGGAGCAACAAAAATGTGGCATTTCTAGTAGTTGGATGTGTTGGTTGCACTTCCTTGTTACTAGTCCTGTCTTTCTTCCTTTACAAATACTGCAAAGGCACCGCGTGCAAGTCTAGTAGAGTTCATGACTCTGGAAGACTAGATGATCTCGATCGTGAAAACGAATCACAACCTCGAGCTAACCATGCGGTTCTCGAGAAGAGGTTAAGCCATGTAATCAGCATGGGAAATGGAGGTACCCTTTTGGAGGAAATTTCCCTTCAGACATTACTTGAAGCCACCAACAATTTCTCCGAAGAGAACAAAATTGGCGTCGGTAGCTTTGGTTCGGTGTATCGTGCAAAACTTGAAGATGGAAAAGAAGTTGCTATAAAGAGAGCTGAAATTTCATCAACTTCAACTTCTCATGCAAATTTTGGTGTCACCAAAAGACAAGAAGACACAGACAGTGCGTTTGTGAATGAACTTGAATCTTTATCAAGACTCCACCACAAAAACTTGGTCAAATTACTTGGTTTCTATGAAGACAAAAATGAGCGAATCTTAGTCTACGAATATATGAACAACGGAAGCTTAAACGACCATCTTCATAAGTTTCAAACTTCAACAATTATGTCATGGAGCGGTCGTATAAAAGTCGCTTTAGACGCGGCTAGGGGTATTGAATATTTACACAAATACGCTCAACCGCCAATTATTCACCGTGACATTAAAACATCAAACATTTTACTAGATTCAAAATGGGTCGCTAAAGTGTCCGATTTCGGGTTATCATTAATGGGTCCAGAAGACGAAGAGTCACATCTTTCGCTACTAGCGGCCGGAACCGTTGGTTACATGGATCCAGAATACTATAGGCTTCAATATTTAACATCAAAAAGTGATGTCTATAGTTTTGGTGTTGTTTTGTTAGAACTTTTAAGTGGGTACAAAGCCATACATAAAAATGAAAATGGTGTACCAAGAAATGTGGTTGATTTTGTGGTACCCTATATTGTTCAAGATGAGATTCATAGAATTTTGGACACAAAATTGCCACCACCAACACCATTTGAGATTGAGGCTGTGACATTTGTGGGCTATTTAGCTTGTGATTGTGTTCGTTTAGAAGGTAGAGATAGACCAAATATGAGTCATGTTGTGAATAGTTTAGAAAAAGCTCTTGAGGCATGTTTGGCACAGCCAATATTTTGTGAGTCAACTAGGACCACTAGTACCAATGTTTCTTATGAGTGA 2373 0.3751 MAFHHKHLFISLYFFLSFILLPIINTLSTVSISHTSNSNQTLICVLQSQNQQKHSNLNCTSFSPSISFGTKLELNSNVSYSQIVGGNGFLCGLTSSSNSSNSIIVCWRFSNSSNSSTIVSFKRLYHGPVIEDIDSGNSHVCGLVKGNNGFRLECWQWRGFNSSSGMNMNMSNIAVGENFVCGLLENGKGNVVTCKGSNNRVVGNEPKNGGNYSVIEAGSNHVCAISNDGGLDCWGDMVGEKPKGRFISLALGENRSCALGYDGIVTCWGLNNFTLPLTLKNTFFESIVAKKSVFCGVLSSNYSLFCWGNEVFESKKVFDNVLPGPCKNQCPCGPLSDSAKLCVSPAIICKPCSPSFEIPTLPPSNPPSQMPENPSKSGTWSNKNVAFLVVGCVGCTSLLLVLSFFLYKYCKGTACKSSRVHDSGRLDDLDRENESQPRANHAVLEKRLSHVISMGNGGTLLEEISLQTLLEATNNFSEENKIGVGSFGSVYRAKLEDGKEVAIKRAEISSTSTSHANFGVTKRQEDTDSAFVNELESLSRLHHKNLVKLLGFYEDKNERILVYEYMNNGSLNDHLHKFQTSTIMSWSGRIKVALDAARGIEYLHKYAQPPIIHRDIKTSNILLDSKWVAKVSDFGLSLMGPEDEESHLSLLAAGTVGYMDPEYYRLQYLTSKSDVYSFGVVLLELLSGYKAIHKNENGVPRNVVDFVVPYIVQDEIHRILDTKLPPPTPFEIEAVTFVGYLACDCVRLEGRDRPNMSHVVNSLEKALEACLAQPIFCESTRTTSTNVSYE* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1017 790 Gene3D Phosphorylase Kinase; domain 1 439 565 - -
Mtr4g1017 790 SMART serkin_6 476 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1017 790 Pfam Protein kinase domain 477 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g1017 790 Gene3D Transferase(Phosphotransferase) domain 1 566 775 - -
Mtr4g1017 790 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 17 774 IPR044815 GO:0004674
Mtr4g1017 790 ProSitePatterns Protein kinases ATP-binding region signature. 482 504 IPR017441 GO:0005524
Mtr4g1017 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Mtr4g1017 790 Gene3D - 163 333 IPR009091 -
Mtr4g1017 790 MobiDBLite consensus disorder prediction 418 437 - -
Mtr4g1017 790 SUPERFAMILY Protein kinase-like (PK-like) 458 763 IPR011009 -
Mtr4g1017 790 PIRSF SRK 34 119 IPR024171 GO:0004674
Mtr4g1017 790 PIRSF SRK 325 790 IPR024171 GO:0004674
Mtr4g1017 790 SUPERFAMILY RCC1/BLIP-II 116 311 IPR009091 -
Mtr4g1017 790 CDD STKc_IRAK 482 765 - -
Mtr4g1017 790 PANTHER OJ000114_01.11 PROTEIN 17 774 - -
Mtr4g1017 790 ProSiteProfiles Protein kinase domain profile. 476 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1017 Mtr-Chr4 12810272 12812781 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1017 26 789 Receptor kinase-like Gene Family AT5G47850 50.579 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mtr4g1017 Pkinase 7.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1017 - - pvu:PHAVU_011G003100g 1011.52