Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0958 ATGGTTTTGCTTGGGCAAAACACCAAGAATATGATGAACTTTATGACACTCATCACATTTCTACTCTTCATAATGCCTTCCATTTCTTACTCCCAAAATCTTGGAAACAACATATTACTCACTAACCGTAAGATTTTCCCAAAACAAGAAACAATTTCCTCTTACGCTGTTGTGTTTGATGCTGGTAGCACTGGAAGCCGTGTCCATGTTTACCATTTTGATCAAAACTTAAATCTTCTTCATGTTGGTAAAGATGTTGAGTTTTATAATAAGACAACACCCGGTTTGAGTGCATACGCGGATAATCCAGAACAAGCTGCAAAATCTTTGATTCCACTTTTAGAGCAAGCAGAAAGTGTGGTTCCTGAGGACCAGCGCTCCAAGACACCCGTTAGACTTGGGGCAACAGCAGGTTTAAGGCTTTTGAATGGGGATGCTTCTGAAAAGATACTGCAATCGGTAAGGGATTTGTTGAGCAACAGAAGTACCTTCAATGTTCAACCTGATGCAGTTTCTATTATTGATGGAACCCAAGAAGGTTCTTATCTATGGGTGACAGTTAACTATGCATTGGGGACTTTGGGGAAAAAATTCACAAAAACAGTGGGAGTAATGGATCTTGGAGGTGGATCGGTTCAAATGGCATATGCAGTGTCAAGGAATACAGCTAAAAATGCTCCAAAAGTTGCTGATGGAGATGATCCATATATTAAGAAGCTTGTACTCAAGGGAAAAAAATATGATCTCTATGTTCATAGTTACTTACACTTTGGTACAGAAGCATCTCGGGCTGAGATTTTGAAGGTCACTCATAATTCTCCTAACCCTTGCATTTTAGCTGGATTTGATGGGACATACAGATATGCTGGAGAAGAATTTAAGGCCAATGCCCTAGCTTCTGGAGCCAGTTTTAAAAAATGCAAAAAGATAGTTCATCAGGCTCTTAAATTGAATTATCCATGTCCTTATCAGAATTGCACTTTTGGTGGAATTTGGAATGGTGGAGGAGGAAGTGGACAGAGAAAACTTTTTGCTGCTTCATTTTTCTTTTACCTAGCTGCAGAAGTTGGTATGGTTGATCCAAATAAACCTAATTTCAAAATTCGACCTGTGGATTTCGAGAGTGAAGCTAAGAAAGCTTGTGCATTAAATTTTGAGGATGCCAAATCCAGTTATCCATTTCTTGCTAAGAAAAATATAGCTTCATATGTATGCATGGATCTTATATATCAGTATGTGTTGCTCGTTGATGGATTTGGCTTAGATCCATTGCAAGAGATTACAGCAGGAAAGCAAATTGAATATCAAGATTCTCTTGTGGAAGCTGCATGGCCACTAGGCAATGCTGTAGAAGCCATATCATCGTTACCTAAATTTGAAAAATTGATGTATTTTATTTAA 1401 0.3833 MVLLGQNTKNMMNFMTLITFLLFIMPSISYSQNLGNNILLTNRKIFPKQETISSYAVVFDAGSTGSRVHVYHFDQNLNLLHVGKDVEFYNKTTPGLSAYADNPEQAAKSLIPLLEQAESVVPEDQRSKTPVRLGATAGLRLLNGDASEKILQSVRDLLSNRSTFNVQPDAVSIIDGTQEGSYLWVTVNYALGTLGKKFTKTVGVMDLGGGSVQMAYAVSRNTAKNAPKVADGDDPYIKKLVLKGKKYDLYVHSYLHFGTEASRAEILKVTHNSPNPCILAGFDGTYRYAGEEFKANALASGASFKKCKKIVHQALKLNYPCPYQNCTFGGIWNGGGGSGQRKLFAASFFFYLAAEVGMVDPNKPNFKIRPVDFESEAKKACALNFEDAKSSYPFLAKKNIASYVCMDLIYQYVLLVDGFGLDPLQEITAGKQIEYQDSLVEAAWPLGNAVEAISSLPKFEKLMYFI* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0958 466 Gene3D Exopolyphosphatase. Domain 2 175 434 - -
Mtr4g0958 466 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 11 466 IPR000407 GO:0016787
Mtr4g0958 466 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 174 189 IPR000407 GO:0016787
Mtr4g0958 466 Gene3D - 55 449 - -
Mtr4g0958 466 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 11 466 - -
Mtr4g0958 466 CDD NBD_sugar-kinase_HSP70_actin 57 216 - -
Mtr4g0958 466 Pfam GDA1/CD39 (nucleoside phosphatase) family 52 458 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0958 Mtr-Chr4 12336448 12339931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0958 54 455 Calmodulin-binding Proteins AT3G04080 57.816 1.96e-163 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0958 K14641 - mtr:MTR_4g036220 837.795