Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0947 ATGGGGGGAATTGGTAAAACAACCATTGCAAAAGCAATTTACAAAGAAATCTGTCGCAATTTCAGAGATAGAAGTTTCCTTGCAAACATTAGGGAAAGGTGGGAGCATATTGATGGAAAAGTGTCTTTACAAGAACAACTTCTGCTTGATATCTTAAAAACAACTACAGAGATGCCAAACATCGACTCTGGGAAAAATACAATAAAGGATATGCTCTGCAATAAGAGAGTACTTCTTGTTCTTGATGATGTGGATAGTTTGGACCAACTAAATGCTTTGTGTGGAAGTCGTGAATGGTTTGGTTCAGGGACTAGAATAATCATTACAACCAAAGATAAACGTATACTTGGAGCAAATGGAGTTGATAAGGTATACATGATGGAAACGATGGATGATAGTGAATCAATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAGATAGGCCTAGAGATGATTTTCTTAAAATTTCTAAAGAAATAGTTCACTACTCTGGGGGATTGCCTCTAGCTCTAACAGTCCTTGGTTCCTATTTATTTGGAAACGGAATAGCAGATTGGATGTGTGTATTGGAGAAAATCAAAATAATTCCCAAAGATGAAGTACAACGGAAGTTAAAAGTAAGCTATGATGGTTTAAATGATGATACAGAAAAAGATATATTCCTTGACATAGCTTGTTTCTTTATTGGGATGGACCGAAACGATGTTACACAAATATTAAATGGATGTGGACTTTTTGCTAATATCGGAATAAGTGTCCTTGTTGAGCGAAGCCTTCTAACTGTCGATGATAAGAATACACTTGGAATGCATGATTTATTACGAGATATGGGAAGGGAAATCATTCGTGAAAAATCACCAAGGGATCCTGAGGACCGTAGTAGGTTATGGTTTCAAGAGGATGTGCTTAATGTTTTATTTGAAAAAACTGGAACAAAAGCTGTTGAGGGACTAGCTTTGAAGTTGCCAATAACTAGTTCAAAATGTTTTAGTGCTGAATCATTTGAGAAGATGGAGAGACTAAGATTGCTTCAACTTGCTGGAGTACAACTTGATGGAGATTTCGAGTATCTTTCAAGAAAACTAAGATGGCTGTGTTGGAAAGGATTTCCTTTACCATTCATACCTTCAAACTTTTATCAAAGAAATTTAGTTTCCATTGAGTTAGAAAACAGTAAAATGATATTTGTGTGGAAAGAGACCCAGAGGCTGGCGAAGCTGAAAATTCTCAATCTTAGTCATTCTCATTATTTGATGCATACCCCAGACTTTTCATATTTGCCTAATCTTGAAAAGCTAGTACTCAAAGATTGTCCAATGTTGACCGAGGTTTCTCATACCATTGGAGATCTCGGTGAAATACTTCTAATAGATTTGGAAGATTGTGTTAGCCTTCGTAGCCTTCCAAGAAGCATCTATAAGTTGAAATCTCTGAAAACTCTCATTCTTTCTGGGTGTATAATGATTGACAAGTTGGAAGAGGACATAGAACAGATGGAATCTTTAACCACTCTGCTTGCAGATAACACTGCATTAACAAGAGTGCCCTTTTCAATAGTAAGGTCAAAAAGTATTGTATATATTTCTTTGTGCGGCCATGAAGGATTCTCACGTGATGTGTTTCCATCTATCATTAAGTCTTGGATGTCTCCAACAAATAATCTCCCATCTTACTTTCAAACATCTACTATCATGTCATCTCATGTTCCTTTAGATGTACCACGTAGTAGTTCCCAGGAACTATCATCAATTTCCAAGTACCTTCCAAGTATTCGAAGTCTTTGGGTGAAGTGTAGCTCAGATCTGCAATTATTTTGGATGCCTTATATGCCGCAAATTCTAAAGAATTGGAACCAACTACAACTCAAGTATCTAGAAATTCCTCCAAATCTCTTTTCATTCCAATGGGAATGA 1914 0.3652 MGGIGKTTIAKAIYKEICRNFRDRSFLANIRERWEHIDGKVSLQEQLLLDILKTTTEMPNIDSGKNTIKDMLCNKRVLLVLDDVDSLDQLNALCGSREWFGSGTRIIITTKDKRILGANGVDKVYMMETMDDSESIELFSWHAFKQDRPRDDFLKISKEIVHYSGGLPLALTVLGSYLFGNGIADWMCVLEKIKIIPKDEVQRKLKVSYDGLNDDTEKDIFLDIACFFIGMDRNDVTQILNGCGLFANIGISVLVERSLLTVDDKNTLGMHDLLRDMGREIIREKSPRDPEDRSRLWFQEDVLNVLFEKTGTKAVEGLALKLPITSSKCFSAESFEKMERLRLLQLAGVQLDGDFEYLSRKLRWLCWKGFPLPFIPSNFYQRNLVSIELENSKMIFVWKETQRLAKLKILNLSHSHYLMHTPDFSYLPNLEKLVLKDCPMLTEVSHTIGDLGEILLIDLEDCVSLRSLPRSIYKLKSLKTLILSGCIMIDKLEEDIEQMESLTTLLADNTALTRVPFSIVRSKSIVYISLCGHEGFSRDVFPSIIKSWMSPTNNLPSYFQTSTIMSSHVPLDVPRSSSQELSSISKYLPSIRSLWVKCSSDLQLFWMPYMPQILKNWNQLQLKYLEIPPNLFSFQWE* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0947 637 Pfam NB-ARC domain 1 191 IPR002182 GO:0043531
Mtr4g0947 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 224 IPR027417 -
Mtr4g0947 637 Gene3D Ribonuclease Inhibitor 318 635 IPR032675 -
Mtr4g0947 637 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 1 619 - -
Mtr4g0947 637 SUPERFAMILY L domain-like 320 622 - -
Mtr4g0947 637 PRINTS Disease resistance protein signature 71 85 - -
Mtr4g0947 637 PRINTS Disease resistance protein signature 164 178 - -
Mtr4g0947 637 PRINTS Disease resistance protein signature 402 418 - -
Mtr4g0947 637 Gene3D - 1 122 IPR027417 -
Mtr4g0947 637 Gene3D - 129 213 IPR042197 -
Mtr4g0947 637 SUPERFAMILY "Winged helix" DNA-binding domain 199 306 IPR036390 -
Mtr4g0947 637 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 619 IPR044974 GO:0006952
Mtr4g0947 637 Coils Coil 489 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0947 Mtr-Chr4 12197752 12202349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0947 1 521 WRKY Transcription Factor Family AT5G45050 32.299 3.56e-69 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0947 - - cam:101494533 881.708