Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0934 ATGGATTTCAAGAGCAATGGCAGTGAAGAAACTCAGCTGTATCATGCTCAAATCCATTTATACAAACATGTATACAGCTTTATAAGTTCCATGGCACTCAAATCTGCTGTGGAACTAGGAATAGTAGATGCAATCCACAAACATGGAAAGCCTATGACTGTTCCTGAATTAGCCTCATCTTTGAAACTTCACCCTTCTAAAGTTAGTGTCCTATATAGGTTCTTGCGCTTGCTAACACACGATGGTTTCTTCGCAAAAACAACAGTGAAAGAAGAAACAGCTTATGCTCTCACACCTCCTTCAAAGCTTCTCATCAATGGTGAATCAACTTGTTTTGCACCACTTGTTAAGGGAATTCTTCATCCATGTTCTCTGGATATGTGGCACTCCTCTAAGAAATGGTTCTCAGAGGAGAAGGATCTTGCACTTTATGAAAGTGCAATGGGGGAGACATTTTTTAACTTTCTTAACAAAGATTCTGAATCTGATAAACTTGGTCTGTTTCAAGGGGCCATGGCAGCTGATTCACAAATGTTTAAGCTTGCTCTCAAGGACTGCAGCCATGTGTTTGAGGGTTTGGAATCTTTGGTTGATGTGGCAGGTGGGACTGGAGTTGTGTCAAAACTCATTCATGAAGAATTTCCACACATCAAATGCACAGTTTTAGATCAACCACAGGTTGTGGCTAACTTATCTGGAACTCAAAATTTGAACTTTGTTGGTGGAGATATGTTCAAATCAATCCCTCCTGCAGATGCTGTTTTACTCAAGTGGGTTCTGCATGATTGGGATGATGAGCTATCCTTAAAGATATTGAAGAACAGCAAAGAAGCTATTTCAGGAAAAGGAAAAAAAGGAAAGATAATAATCATAGACATATCAATTGATGAAACAAGTGAAGATCGTGAGTTAACCGAGTTACAATTGCACTTTGACATGGTAATGATGACTCTACATAATGGAAAAGAAAGAGAAAAGAAAGAATGGAAGAAACTCATATATGATGCAGGTTTCAGTAGCTACAAGATTACTCCAATATGTGGCTTCAAGTCTCTTATAGAAGTTTATCCTTAA 1074 0.3836 MDFKSNGSEETQLYHAQIHLYKHVYSFISSMALKSAVELGIVDAIHKHGKPMTVPELASSLKLHPSKVSVLYRFLRLLTHDGFFAKTTVKEETAYALTPPSKLLINGESTCFAPLVKGILHPCSLDMWHSSKKWFSEEKDLALYESAMGETFFNFLNKDSESDKLGLFQGAMAADSQMFKLALKDCSHVFEGLESLVDVAGGTGVVSKLIHEEFPHIKCTVLDQPQVVANLSGTQNLNFVGGDMFKSIPPADAVLLKWVLHDWDDELSLKILKNSKEAISGKGKKGKIIIIDISIDETSEDRELTELQLHFDMVMMTLHNGKEREKKEWKKLIYDAGFSSYKITPICGFKSLIEVYP* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0934 357 Gene3D - 2 104 IPR036388 -
Mtr4g0934 357 Pfam O-methyltransferase domain 128 339 IPR001077 GO:0008171
Mtr4g0934 357 PANTHER O-METHYLTRANSFERASE 5 357 IPR016461 GO:0008168
Mtr4g0934 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Mtr4g0934 357 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Mtr4g0934 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 357 IPR016461 GO:0008168
Mtr4g0934 357 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 5 357 - -
Mtr4g0934 357 SUPERFAMILY "Winged helix" DNA-binding domain 11 108 IPR036390 -
Mtr4g0934 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 356 IPR029063 -
Mtr4g0934 357 Gene3D Vaccinia Virus protein VP39 105 357 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0934 Mtr-Chr4 12002612 12004875 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0934 8 344 Monolignol Biosynthesis Gene Families AT5G54160 31.445 3.13e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0934 K22588 - ag:AAC49856 548.895