Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0933 ATGGATTTCAGTAGCAATGGCAGTGAAGAAAATCAACTGTATCACGCTCAAATCCATCTGTACAAACATATATACGGCTTTATAAATTCCATGGCACTCAAATCAGCCGTGGAACTAGGCATAGCAGATGCAATCCAAAACCATGGAAAACCAATGACTCTTACTGAATTAGCTTCATCTTTGAAACTCCACCCTTCTAAAGTTAGTGTCCTTTATCGTCTCTTGCGCTTGCTAACACACAATGGTTTCTTTGCGAAAACAACACTGATGAGTGGCAAAGAAGGAGAAGAAGAAACAATATATTCTCTCACTCCTCCTTCAATGCTTCTCATAAGTGGCAAATCAACATGTTTGTCACCATTTGTTACCGGAACGGTTCATCCATGTCGTCTGAACATATGGTACTCCTCTACGAAATGGCTCACTGAGGAGAAGGAACTCAGTCTCTTTGAGAGCGCAAGAGGAGAGACATTTTGGGACTATCTTAACAAAGATACTGAATCTGATGAACTGAGTATGTTTCAAGAGGCTATGGCTGCTGATTCTCAAATCTTCAACCTTGCTCTAAAAGAGTGCAATCATGTGTTTGAAGGTTTGAGGTCTATAGTTGATGTTGGAGGTGGAAGAGGAGGTTTCACAAAACTCATCCATGAAGCTTTTCCTGACCTCAAATGCACAGTATTTGATCAACCACAGGTTGTGGCCAATTTATCTGGAGATGAAAATTTGAAATTTGTTGGTGGAGATATGTTCGAATCTATCCCTTCTGCAGATGCTGTTTTACTTAAGTGGATTCTGCATGATTGGAATGATGATCTCTCTTTAAAGATATTGAAGAACTGCAAAACAGCTATTTCAGGAAAAGGGAAAACGGGAAAGGTGATAATCATTGACATATCAATTGATGAAACAAGTGACAATCATGAAACAAATGAGTTGAAATTGGACTTTGACTTCATGATGATGACTTTGTTAAATGGAAAAGAAAGAGAGAAGAAAGAATGGGAGAAACTCATATTCGACGCAGGTTTCAGCAGCTATAAGATTACACCTATATGCGGTTTCAAGTCTCTCATCGAAGTATATCCATAA 1092 0.3883 MDFSSNGSEENQLYHAQIHLYKHIYGFINSMALKSAVELGIADAIQNHGKPMTLTELASSLKLHPSKVSVLYRLLRLLTHNGFFAKTTLMSGKEGEEETIYSLTPPSMLLISGKSTCLSPFVTGTVHPCRLNIWYSSTKWLTEEKELSLFESARGETFWDYLNKDTESDELSMFQEAMAADSQIFNLALKECNHVFEGLRSIVDVGGGRGGFTKLIHEAFPDLKCTVFDQPQVVANLSGDENLKFVGGDMFESIPSADAVLLKWILHDWNDDLSLKILKNCKTAISGKGKTGKVIIIDISIDETSDNHETNELKLDFDFMMMTLLNGKEREKKEWEKLIFDAGFSSYKITPICGFKSLIEVYP* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0933 363 Gene3D - 1 110 IPR036388 -
Mtr4g0933 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 362 IPR029063 -
Mtr4g0933 363 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 5 363 - -
Mtr4g0933 363 CDD AdoMet_MTases 202 299 - -
Mtr4g0933 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Mtr4g0933 363 Pfam O-methyltransferase domain 134 345 IPR001077 GO:0008171
Mtr4g0933 363 Gene3D Vaccinia Virus protein VP39 111 363 IPR029063 -
Mtr4g0933 363 PANTHER O-METHYLTRANSFERASE 5 363 IPR016461 GO:0008168
Mtr4g0933 363 SUPERFAMILY "Winged helix" DNA-binding domain 10 114 IPR036390 -
Mtr4g0933 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 363 IPR016461 GO:0008168
Mtr4g0933 363 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0933 Mtr-Chr4 11974645 11976126 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0933 31 350 Monolignol Biosynthesis Gene Families AT5G54160 32.817 2.79e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0933 K22588 - gmx:100807589 548.51