Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0870 ATGTCCATAAACATGAAAACCCTAACCCAAGCCTTCGCAAAAACCGCAACCCTAATAGAAAAAACCGTTTCAACAACCGTTCAAGAAGTAACCGGTCCAAAGCCTCTTCAAGACTACGACCTTCTCCACCAGATCGGTTCCGCCGGTCCCGCTTTAGCCTGGAAGCTTTACTCCGCCAAATCACGCGATCCGTCTCGGCAGCATCAGTATCCGGTTGTTTGCGTTTGGGTGTTGGATAAAAAGGCGTTGTCGGAGGCGAGATTGAAGGCTGGATTGACCAAGGCGGCTGAGGATGCTTTTTTGGATTTGATTAGGATGGATGCTGGGAAGATGGTTAGGTTGAGACATCCAGGGATTGTTCATGTTGTTCAAGGGTTGGATGAGAGTAAGAATGCGATGGCCATGGTTACTGAACCGTTGTTTGCTTCCGTTGCGAATACTCTTGGGAAGCTTGATAATGTTCAAAGTGTTCCTAAGGATCTTAAGGGAATGGAAATGGGACTGTTGGAGGTGAAGCATGGTTTACTTCAGATTGCGGAGTCATTGGATTTTCTCCACAACCATGCCCATCTTATTCATCGAGCTATAGCACCCGAGAATGTTTTTATCACATTGAGTGGAGCTTGGAAACTTGGTGGATTTGGTTTTGCAATTTCTTCTCAGAACACTGGTGACTCATCTAATCTGCATGCTTTCCATTATGCTGAATATGATGTTGAAGACTCTGTTTTGCCACTTCAGCCATCCATTAATTACACTGCTCCTGAGATGGTGAGGAGCACTGCTTCTTCAGCTGGGTGCTATTCTGATATTTTCAGTTTTGGATGTCTTGCCTACCATTTAATTGCTCGCAAGCCTTTGTTTGACTGCAACAACAATGTCAAGATGTACATGAATACATTGACTTACTTATCCAGTGATGCTTTCTCATCTATTCCATCGGATCTGGTTCCTGACTTGCAAAGGATGCTCTCTTCAAATGAATCTTTCAGGCCAAGTGCAATGGATTTTACAGGCTCACCATTTTTTCGGAATGACACTAGGTTACGTGCTCTGCGTTTCCTGGACCACATGCTTGAAAGAGATAACATGCAGAAGTCAGAGTTCTTAAAAGCATTGTCAGATATGTGGAAAGATTTTGATTCCCGTGTATTGCGATACAAGGTCCTTCCACCACTTTGTGCAGAACTTAGGAATGTCGTTATACAACCGATGATTCTACCAATGGTTTTAACCATTGCAGAGTCTCAGGACAAGAATGACTTTGAGCAATCAACACTTCCAGCCCTTGTTCCTGTCTTAAGCACTGCTTCTGGTGATACAATGCTACTGCTTCTGAAGCATGCCGAGCTAATAATAAACAAGACTAGTCAAGACCATTTAATTTCACATGTTCTTCCAATGATTGTTCGAGCCTATGATGATAATGATTCACGTTTACAAGAAGAGGTGTTGAAAAAGTCGGTATCCCTTGCCAAACAACTTGATACCCAGCTGGTGAAACAAGTGATTTTACCACGTGTTCATGGACTAGCACTCAAAACAACAGTCGCCGCGGTTAGAGTCAATGCTTTGCTTTGCCTAGGAGACATGGTTAACCGACTTGATAAACATGCTGTCCTGGAAATCTTGCAAACTATTCAGCGTTGTACTGCTGTTGACCGTTCTCCTCCAACCCTTATGTGTACCCTCGGTGTTGCAAATTCTATTTTTAAGCAGTATGGAGTAGAATTTGTTGCTGAGCATGTTCTTCCATTGCTTATGCCACTCCTGACTGCTCAACAACTGAATGTTCAACAGTTTGCCAAATATATGCTCTTTGTCAAGAATATCCTCCAGAAGATAGAAGAGAAGCGAGGAGTTGCTGTGACTGATTCTGGAATCCCAGAGGTAAAACTATCTCCTGCAGTTAACGGCCTTCAGGTGGAAGCTCCAAGGACAGCCAGCAGCACCGTTGCTTCAACAAAAAGCAGCTTCTCTTGGGATGCCGATTGGGGTCCCAAAGCAGCGGCCCCCGCCAATTCTGTCCATAATTCTATTAATACATCTAATAAATCTGTGTTAGGAAACCCTGTGGGTCAAGTAACATCCTTACAAAATAATTTGCCCTTATCTGGTGTATCTAATCCGCAAACATCCAATTCATGTCCTTCAGTAGATTTAGAGTGGCCTCCTCGTGCATCTTCTGGTCTTAACGCACAATTTGGTGATACTGAAAGGAAAACAGTTGCAGCTGGAACCTCATCCACATCCAATCTTGAAGATGATGATCCTTTTGCTGATTGGCCTCCACGCCCTAGTGGCTCATTATCCGGTGTATCTGGAAATTCCAACAATGGTATTTCAGGAATGGCATTAAACAAGATAGGGCATAATTCAATGACAAGCAATTCAAGCAATCTTGGTCTCCAGGCCAGCAACAATTGGTCCGTCAAGTCCCAAAATTCTGTGGAGTCTATCGGTTTGAACCCAAGGAATGCTAGTTCATCTATCAGTAACCCGAACAATGGCTTTGAACCTCAGAGTTCTCTTGGGTTCTTGAAACAAAGTCAGGCTTTTCCGGTATCAAATGCTGTTTCATCATCATATAATAATGTTAAATCAACTGATCTTGGATCAATATTTTCTTCCAATAAGAATGAACAATTTGCACCTAGACTTGCACCACCCCCTTCAACCACAGTGGGTAGAGGACGGGGAAGAGGTAGAGGAGCGACTTCATCCAGACAGCACTCTCATACCAAGTCAAGCTCCGAGCAGCCACCCCTTTTGGATTTGTTGGGGTAA 2787 0.4367 MSINMKTLTQAFAKTATLIEKTVSTTVQEVTGPKPLQDYDLLHQIGSAGPALAWKLYSAKSRDPSRQHQYPVVCVWVLDKKALSEARLKAGLTKAAEDAFLDLIRMDAGKMVRLRHPGIVHVVQGLDESKNAMAMVTEPLFASVANTLGKLDNVQSVPKDLKGMEMGLLEVKHGLLQIAESLDFLHNHAHLIHRAIAPENVFITLSGAWKLGGFGFAISSQNTGDSSNLHAFHYAEYDVEDSVLPLQPSINYTAPEMVRSTASSAGCYSDIFSFGCLAYHLIARKPLFDCNNNVKMYMNTLTYLSSDAFSSIPSDLVPDLQRMLSSNESFRPSAMDFTGSPFFRNDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFEQSTLPALVPVLSTASGDTMLLLLKHAELIINKTSQDHLISHVLPMIVRAYDDNDSRLQEEVLKKSVSLAKQLDTQLVKQVILPRVHGLALKTTVAAVRVNALLCLGDMVNRLDKHAVLEILQTIQRCTAVDRSPPTLMCTLGVANSIFKQYGVEFVAEHVLPLLMPLLTAQQLNVQQFAKYMLFVKNILQKIEEKRGVAVTDSGIPEVKLSPAVNGLQVEAPRTASSTVASTKSSFSWDADWGPKAAAPANSVHNSINTSNKSVLGNPVGQVTSLQNNLPLSGVSNPQTSNSCPSVDLEWPPRASSGLNAQFGDTERKTVAAGTSSTSNLEDDDPFADWPPRPSGSLSGVSGNSNNGISGMALNKIGHNSMTSNSSNLGLQASNNWSVKSQNSVESIGLNPRNASSSISNPNNGFEPQSSLGFLKQSQAFPVSNAVSSSYNNVKSTDLGSIFSSNKNEQFAPRLAPPPSTTVGRGRGRGRGATSSRQHSHTKSSSEQPPLLDLLG* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0870 928 CDD PK_SCY1_like 45 345 - -
Mtr4g0870 928 ProSiteProfiles Protein kinase domain profile. 39 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0870 928 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 7 927 - -
Mtr4g0870 928 SUPERFAMILY ARM repeat 311 616 IPR016024 -
Mtr4g0870 928 MobiDBLite consensus disorder prediction 880 928 - -
Mtr4g0870 928 Pfam Protein kinase domain 107 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0870 928 MobiDBLite consensus disorder prediction 699 719 - -
Mtr4g0870 928 Gene3D - 347 620 IPR011989 -
Mtr4g0870 928 SUPERFAMILY Protein kinase-like (PK-like) 35 347 IPR011009 -
Mtr4g0870 928 Gene3D Transferase(Phosphotransferase) domain 1 151 346 - -
Mtr4g0870 928 Gene3D Phosphorylase Kinase; domain 1 37 138 - -
Mtr4g0870 928 MobiDBLite consensus disorder prediction 816 843 - -
Mtr4g0870 928 MobiDBLite consensus disorder prediction 699 777 - -
Mtr4g0870 928 MobiDBLite consensus disorder prediction 731 755 - -
Mtr4g0870 928 MobiDBLite consensus disorder prediction 905 921 - -
Mtr4g0870 928 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 927 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0870 89 344 AGC Kinase Gene Family AT3G10540 24.151 1.47e-09 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Mtr4g0870 Pkinase 2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0870 K17541 - gmx:100796211 1467.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0870 4 11115930 11128016 Mtr4g0870 4 11115930 11128016 ECH