Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0841 ATGGAAAGAGAATATGAAAGAGGTTACATAAAAAAAGGACCATGGAGTAGTGAAGAAGATGAAGTGTTGTTGAAACATGTTAACAAATATGGTCCTAGAGATTGGAGCTCCATTCGATCCAAAGGTCTTTTGCCAAGAACTGGAAAATCTTGTCGGTTAAGATGGGTTAATAAGCTTAGACCCAACTTGAAAACAGGATGCAAGTTTTCATCAGAGGAAGAAAGGGTGGTGATAGAATTACAGGGGCAATTTGGGAACAAATGGGCCAAAATTGCTACATATTTGGAAGGGAGAACAGACAATGATGTGAAGAACTTTTGGAGTAGCAGGAGAAAAAGGATGGAGAGGAATTATCCAAGGACACCATCACCACCATCAAAGCAACAGAAAAACAAAGGAAAAGCTGTTTCTAATCAAGTAAAAGTTGAAAAGGTTCCTGAATGTGGTTCCAATCAGCTGGAGGAAAATCTTACTTACCCAACTTCTTATATGGCAAACAAAGAAGAGTTCAAGATGATCAACCTTCCAGATTTGACAAAGCCAAACTACCAAAATTTGGAAAGTGAACTTAATGGAATTATTGAGTTTGAGGCCACTCCACTTCACACAGTACCATCATTTGAGTCTTCATCAGCATACAATTTTCCATTACTCCCTGAATCACAGATGGACTTTCCACTATTCCCAGAGTGCCAAGACCTTGTTCAAGATCCCTTTGACCCTAATTTTATGGACATGTTTGAGCAGAAAAAATGTTCAGAAAGTGTGTGGAGCAAGAAGATTGGAACTAAGTTGCCAAGTCTTGGACTTGAAGGAAATTCTCAGAGTACAAGTTCAAACTGCTTCTTTCAGGACATTCCAACTGAGATTTTTGAATACTTTTCTCAGTAA 891 0.385 MEREYERGYIKKGPWSSEEDEVLLKHVNKYGPRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFSSEEERVVIELQGQFGNKWAKIATYLEGRTDNDVKNFWSSRRKRMERNYPRTPSPPSKQQKNKGKAVSNQVKVEKVPECGSNQLEENLTYPTSYMANKEEFKMINLPDLTKPNYQNLESELNGIIEFEATPLHTVPSFESSSAYNFPLLPESQMDFPLFPECQDLVQDPFDPNFMDMFEQKKCSESVWSKKIGTKLPSLGLEGNSQSTSSNCFFQDIPTEIFEYFSQ* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0841 296 ProSiteProfiles Myb-like domain profile. 7 59 IPR001005 -
Mtr4g0841 296 MobiDBLite consensus disorder prediction 110 140 - -
Mtr4g0841 296 ProSiteProfiles Myb-like domain profile. 68 111 IPR001005 -
Mtr4g0841 296 PANTHER TRANSCRIPTION FACTOR DUO1 1 296 - -
Mtr4g0841 296 SMART sant 65 113 IPR001005 -
Mtr4g0841 296 SMART sant 11 61 IPR001005 -
Mtr4g0841 296 MobiDBLite consensus disorder prediction 121 136 - -
Mtr4g0841 296 Gene3D - 67 143 - -
Mtr4g0841 296 PANTHER MYB TRANSCRIPTION FACTOR 1 296 - -
Mtr4g0841 296 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Mtr4g0841 296 Pfam Myb-like DNA-binding domain 12 57 IPR001005 -
Mtr4g0841 296 Pfam Myb-like DNA-binding domain 68 108 IPR001005 -
Mtr4g0841 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 63 IPR017930 -
Mtr4g0841 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 115 IPR017930 -
Mtr4g0841 296 CDD SANT 68 107 IPR001005 -
Mtr4g0841 296 CDD SANT 14 59 IPR001005 -
Mtr4g0841 296 Gene3D - 11 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0841 Mtr-Chr4 10782240 10784240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0841 4 292 MYB Transcription Factor Family AT3G60460 40.385 1.69e-62 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mtr4g0841 Myb_DNA-binding 3.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0841 K09422 - gmx:121173231 429.098