Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0839 ATGTCGTCAATGGATGACGCTCAAGACATGTTTTGTAACGATGATCTTGTTAACCCTCTAAGTTCTATGGGTATGCAAGTGTCATGCATTCTTGTTGTGTCACACTTCTTCAACGTTGTTCTTAGGACTATGGGCCAACCTGGACCCATTGCACAAATTCTGGCTGGGTTGATATTAGGTCCAATGTCTCATATTCCATATATAAAAGAGACATTCTTTCCAGCCAGTTCCATAAATTACTATCAAGTAGTGAGCTTCTTTTGTCGCATAAATTTCATGTTTTTATTTGGCTTGGAAATGAATATTCACTACACATTGCGCCATTGGAAAATGGTAACCTTAGTAGCATGTGGAGGTGCCCTAATGGGTGGTATAATTGGTCTATCTGTCTCATTTTATTTGCATCAAGAGTTAACTGATGATACTAATCCCAACTATTACTTTTATATGACCATTATGCTAATGGTATCATACACAAGCTCCCCCATGGTGATTCGTTTGACGGCGGAGTTACGATTTGCTGCATCCGATATCGGGCGAATCGCGGTGTCTTCAGCGTTGATTACAGAAATGGCTTGCTTATTGTTCTTCAATGTGATAGAAGGTAAAACAGCTAGAACATTGCTACAAAAACTTGGTTATTCAATTTATAACTTTGTCCTTCCAGTATACTTTGGATATTTGGGATTACAATGTGACCTCATAAATGTGTTTACAAGACTGAATCGAACAGCCAATGTAGCCATATTGATCTTGTTGAGCATTGGTAGCAAACTCGGCGGAACTCTTATAGTTTGTCGTTACCTTCATATTCCTACAAATGAAGGGATTTTTCTTGGCTTCATGTTGAACACTAGAGGATATGCTGATTTGTTATTCATTGGTGCAGCAGCAAAGCAAATCACTAGTTTTGATGCCGAATCTTACAATGTGTTGCTAGTATCGATAGTATTAAACACAATAATATCAGGAATAATTGTGTCGTTTATAGCAAAGGGGGAAGAGAAAATGTTTTCAAACAACCATACAACAATTGAACCACAAGAAATGGAAGATGAACTTAAAATTTTGGCTTGTGTGTATGATCCTCGACAAGTATCTGCGATACTAGCCACAATACTAGCAATACATGGCTCTAAAACATCACCTTCCACCACTTATTTAATGCACTTAATAGAGCTTGTGAAGAAAATCAAGTCAAACTTGTTATACCATGAAAAAGAAAATGGCGATATCAGCGATGATGACGAAGCCTTTGGTGGAAATGATGTGGTGGACATTAATAATGCCCTAGATACCTTCACTGAAGACACAAAGATTTTGGTCCAACAAAAAAGGACAGTTTCTTCTTTTCTAAGTCTGTATGAAGAAGTGTGCAGCGAAGCAGAAAATCTTCAAGTATCGATTATTCTTCTTCCCTTTCACAAGCATCAACGAATCGATGGAAAACTTGAAAGCGGAAAAGAAGGTATAAGGATTACTAATCAGAAGGTTCTTAGGCATGCACCTTGTTCTGTCGGTGTAATTATAGAAAGAGGACTTACTACATCATTTGGTTTCTCGGAACTAATAGAATCTGAAACCATTCAAAATGTTGCAACACTTTTTTTTGGAGGGCCGGATGACCGCGAGGCTGTTGCTTGGAGCCTACGCATTTCAAAATGCCCTCGAATTAACTTGACAATCATTAGATTTTTGTTGTCGTCTAAATTAGAAAATGAACAAATTGATAAAAGTGGAGTACAATCTAAGGAAAAAGAGATTTTAATGTCGTTGTCCGGGGAAGAGACTGCGAATGATGAGATTGACAATAACTTCATGGTTGATTTTTATAACAGGCATGTCGCTTCGGGAAAAATTGGATATGTAGAAAATTTTGTGAAGAATGGAAGACAAACAGTTGAATGTTTGAAAGAGATTGGTGACATATACTCTTTGTTTATAGTTGGAAAGGGTGGTAGAGGAAATAGTTCACTAACAATAGATATGAGTGATTGGGAGGAATGTCCAGAACTTGGATCAGTTGGTGATATTTTAGCTTCTTCAGATTTTGATATTCATGGTTCTGTGTTGGTCATTCAACAACATAGAGATGTCAAGAAAGGTCTAATACATGATTAA 2121 0.3725 MSSMDDAQDMFCNDDLVNPLSSMGMQVSCILVVSHFFNVVLRTMGQPGPIAQILAGLILGPMSHIPYIKETFFPASSINYYQVVSFFCRINFMFLFGLEMNIHYTLRHWKMVTLVACGGALMGGIIGLSVSFYLHQELTDDTNPNYYFYMTIMLMVSYTSSPMVIRLTAELRFAASDIGRIAVSSALITEMACLLFFNVIEGKTARTLLQKLGYSIYNFVLPVYFGYLGLQCDLINVFTRLNRTANVAILILLSIGSKLGGTLIVCRYLHIPTNEGIFLGFMLNTRGYADLLFIGAAAKQITSFDAESYNVLLVSIVLNTIISGIIVSFIAKGEEKMFSNNHTTIEPQEMEDELKILACVYDPRQVSAILATILAIHGSKTSPSTTYLMHLIELVKKIKSNLLYHEKENGDISDDDEAFGGNDVVDINNALDTFTEDTKILVQQKRTVSSFLSLYEEVCSEAENLQVSIILLPFHKHQRIDGKLESGKEGIRITNQKVLRHAPCSVGVIIERGLTTSFGFSELIESETIQNVATLFFGGPDDREAVAWSLRISKCPRINLTIIRFLLSSKLENEQIDKSGVQSKEKEILMSLSGEETANDEIDNNFMVDFYNRHVASGKIGYVENFVKNGRQTVECLKEIGDIYSLFIVGKGGRGNSSLTIDMSDWEECPELGSVGDILASSDFDIHGSVLVIQQHRDVKKGLIHD* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0839 706 PANTHER CATION/H(+) ANTIPORTER 1 200 696 - -
Mtr4g0839 706 PANTHER CATION/H(+) ANTIPORTER 1 24 200 - -
Mtr4g0839 706 Pfam Sodium/hydrogen exchanger family 30 201 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr4g0839 706 Pfam Sodium/hydrogen exchanger family 210 332 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr4g0839 706 Gene3D - 22 214 IPR038770 -
Mtr4g0839 706 PANTHER CATION/H + ANTIPORTER 24 200 - -
Mtr4g0839 706 PANTHER CATION/H + ANTIPORTER 200 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0839 Mtr-Chr4 10770103 10773006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0839 201 698 Antiporter Super Family AT1G16380 41.270 5.56e-135 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0839 - - mtr:MTR_4g029520 984.556