Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0828 ATGGCTATTGTTACTCATTCCAGTGTGATATTTTGTGTAATGATATGTCTTATTGGCATAGTTTCAGCTTCAAATGTAATTCCTTCAGCAACTACTTTGGTGTCTTCTTTAATACCTACCCCTAATTATAGTGAGTTGAGTTCTACATTTTATGGTACAAGATGTCCTCGTGCTCTTTATATCATTAGGAGAGAAATAATTGCTGCTGTGTCGAGAGATCGTCGCTTAGGTGCATCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTTCAAGGGTGTGATGCATCAGTATTGTTGAAAGACACACCAACTTTCCAGGGAGAACAAAATGCAAGACCCAATGCCAATTCTCTCAGGGGTTTCGAATTCATAGACAGTTTAAAAGCTAAAATAGAAGCAGTGTGTCCCAATGTTGTTTCTTGTGCAGATATCTTAGCAGTTGCAGCCAGAGATTCTGTTGCTACTCTTGGTGGACCTATTTGGGGAGTTCGTTTGGGCAGAAGAGATTCAACAACTGCAAATTTTAATGCTGCTAATTCAGATTTACCTTCTCCATTCCTTAATCTTAGTGGCCTTATTGCTGCTTTCAAGAAAAAGGGTTTCTCAGCTGATGAAATGGTTGCTTTATCAGGTGCTCACACAATCGGAAAAGCAAAATGTGCAGTATTTAAAAACCGGATTTACAACGAAAGCAACATAAATCCTTATTACAGAAGATCATTGCAAAACACATGTCCAAGGAATGGTGGTGATAACAACTTAGCCAATTTAGACAGCACAACTCCAGCATTCTTTGACAGTGCTTATTACAGAAATTTATTATTCAAAAGGGGTCTTTTGCATTCTGATCAAGAACTCTATAACGGCGGTTCAACCGACTACAAAGTTTTGGCTTATGCAAGAAATCCGTATCTCTTTAGATTCGATTTCGCTAAGGCGATGATTAAGATGGGAAATCTTAGCCCTCTTACTGGAAACCAGGGTCAGATCAGAAAATATTGCAGCAGAGTGAATTAA 1017 0.3874 MAIVTHSSVIFCVMICLIGIVSASNVIPSATTLVSSLIPTPNYSELSSTFYGTRCPRALYIIRREIIAAVSRDRRLGASLLRLHFHDCFVQGCDASVLLKDTPTFQGEQNARPNANSLRGFEFIDSLKAKIEAVCPNVVSCADILAVAARDSVATLGGPIWGVRLGRRDSTTANFNAANSDLPSPFLNLSGLIAAFKKKGFSADEMVALSGAHTIGKAKCAVFKNRIYNESNINPYYRRSLQNTCPRNGGDNNLANLDSTTPAFFDSAYYRNLLFKRGLLHSDQELYNGGSTDYKVLAYARNPYLFRFDFAKAMIKMGNLSPLTGNQGQIRKYCSRVN* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0828 338 CDD secretory_peroxidase 45 337 IPR033905 GO:0004601|GO:0042744
Mtr4g0828 338 Gene3D - 49 335 - -
Mtr4g0828 338 PANTHER PEROXIDASE 40 337 - -
Mtr4g0828 338 PANTHER PEROXIDASE 72-RELATED 40 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 ProSitePatterns Peroxidases active site signature. 77 88 IPR019794 GO:0004601
Mtr4g0828 338 Pfam Peroxidase 63 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 SUPERFAMILY Heme-dependent peroxidases 46 338 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 205 215 IPR019793 -
Mtr4g0828 338 ProSiteProfiles Plant heme peroxidase family profile. 45 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 Gene3D Peroxidase, domain 2 183 317 - -
Mtr4g0828 338 PRINTS Plant peroxidase signature 55 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 PRINTS Plant peroxidase signature 79 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 PRINTS Plant peroxidase signature 138 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 PRINTS Plant peroxidase signature 204 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 PRINTS Plant peroxidase signature 256 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 PRINTS Plant peroxidase signature 272 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 PRINTS Haem peroxidase superfamily signature 77 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 PRINTS Haem peroxidase superfamily signature 157 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 PRINTS Haem peroxidase superfamily signature 205 220 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g0828 338 PRINTS Haem peroxidase superfamily signature 258 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0828 Mtr-Chr4 10652616 10654641 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0828 44 338 Peroxidase AT5G05340 57.239 3.43e-125 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0828 K00430 - gmx:100811432 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0828 4 10652616 10654641 Mtr4g0828 4 10652616 10654641 ECH
Mtr4g0828 4 10652616 10654641 Mtr5g2529 5 33147769 33151977 ECH
Mtr4g0828 4 10652616 10654641 Mtr3g1806 3 30522247 30526510 ECH
Mtr7g1767 7 33676539 33678914 Mtr4g0828 4 10652616 10654641 PCT