Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0827 ATGGGTGTTTTTACTCGTTCAATGGTGACATTTTGTGTGTTGATATGTCTTATTGGCATAGTCTCAGCTTCAAGTGTAATTCCTTCAGCAACTACTTATGTGTCTAATTTGATCCCTGGTCCTTCTAGTGAGTTGAGACCCTCTTTTTATTTGTTGCATGGGTGTCCTCTTGCTGTTCAAACCATTAGGACAGCAATAACAACTGCTGTATTGAAAGATCCTCGTTTGGGTGCATCTTTGCTTCGTCTTCATTTTCACGACTGCTTTGTTCAAGGGTGTGATGCATCAGTATTGTTAAAGGACACACCAACTTTCAAGGGAGAACAAAATGCCAGACCCAATGCCAATTCTCTGAGGGGTTACGAAATCATAGAAAGTGTAAAAGCTCAATTAGAGCTACTCTGTCCCAATGTTGTTTCATGTGCAGATATATTAGCACTTGCAGCTAGAGATTCTGTTGTTGCTCTTGGTGGACCTAATTGGCTAGTTCGTTTGGGAAGACGAGACTCAACAACTGCAGATTTCAATGCTGCTAATTCTGACTTACCTTCTCCATTTCTTGACCTTGATGGCCTTATTGCTGCTTTCAAGAAAAAGGGGTTTACAGCTGAAGAAATGGTTGCTTTATCAGGTGCTCACACAATAGGAAAAGCAAAATGCGGCCTCATCCGAAACAGGATTTACAACGAAAGCAACATAGATCCTAATTACGCAAAATCATTACAAGCGTTTTTACCATGTCCAAAAAGTGGTGGTGATAACAACTTAGCTTCTTTAGACGCCACAACTCCAAATTTCTTTGACAATGCTTATTACAGAAACTTATTGAACAAGAAAGGTCTTTTGCATTCTGATCAACAACTCTATAATGGTGGTTCCACTGATTACAAAGTTTCAGCTTACGCCAATAACCCGTTACTCTTCAGCATCGACTTTGCTAACGCGATGATTAAGATGGGAAATCTTAGCCCTCTAACTGGAGACCAGGGTCAGATAAGAAAATATTGCAGCCGTGTGAATTATTGA 1026 0.4016 MGVFTRSMVTFCVLICLIGIVSASSVIPSATTYVSNLIPGPSSELRPSFYLLHGCPLAVQTIRTAITTAVLKDPRLGASLLRLHFHDCFVQGCDASVLLKDTPTFKGEQNARPNANSLRGYEIIESVKAQLELLCPNVVSCADILALAARDSVVALGGPNWLVRLGRRDSTTADFNAANSDLPSPFLDLDGLIAAFKKKGFTAEEMVALSGAHTIGKAKCGLIRNRIYNESNIDPNYAKSLQAFLPCPKSGGDNNLASLDATTPNFFDNAYYRNLLNKKGLLHSDQQLYNGGSTDYKVSAYANNPLLFSIDFANAMIKMGNLSPLTGDQGQIRKYCSRVNY* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0827 341 Pfam Peroxidase 63 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 ProSitePatterns Peroxidases active site signature. 77 88 IPR019794 GO:0004601
Mtr4g0827 341 PANTHER PEROXIDASE 39 339 - -
Mtr4g0827 341 PANTHER PEROXIDASE 72-RELATED 39 339 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 SUPERFAMILY Heme-dependent peroxidases 53 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 CDD secretory_peroxidase 44 339 IPR033905 GO:0004601|GO:0042744
Mtr4g0827 341 Gene3D - 53 337 - -
Mtr4g0827 341 ProSiteProfiles Plant heme peroxidase family profile. 44 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 ProSitePatterns Peroxidases proximal heme-ligand signature. 205 215 IPR019793 -
Mtr4g0827 341 PRINTS Plant peroxidase signature 55 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 PRINTS Plant peroxidase signature 79 99 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 PRINTS Plant peroxidase signature 138 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 PRINTS Plant peroxidase signature 204 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 PRINTS Plant peroxidase signature 258 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 PRINTS Plant peroxidase signature 274 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 PRINTS Plant peroxidase signature 314 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 Gene3D Peroxidase, domain 2 183 319 - -
Mtr4g0827 341 PRINTS Haem peroxidase superfamily signature 77 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 PRINTS Haem peroxidase superfamily signature 157 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 PRINTS Haem peroxidase superfamily signature 205 220 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr4g0827 341 PRINTS Haem peroxidase superfamily signature 260 275 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0827 Mtr-Chr4 10644156 10646401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0827 43 340 Peroxidase AT5G05340 56.040 9.91e-122 352