Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0822 ATGCGAAAGCTGAGAACAAACTTTGATGATTTAGATGACAATGAGAAAGAAATATTCCTTGGGATGGACAAAGATGATGTAATCCAGACATTAGCTTACTCTGGGCGTTTCCCGGAAATTGGAATAACAATCCTTGACGAGAAAAGCCTTGTAACTATTGATAGCAAGAACAAGATTGGAATGCATACTTTGGTACGAGCAGTGGGAAGAGAAATCATAAGGCAACAGTCGATGGATATGGCCGAGGCAAAGATGCATGACGTGTTCTTGAGTTTCAGAGGGGAAGACATTCGCGCGAAATTCATTTCACATCTCTATTCCTCTCTTGAAAGACGATGA 339 0.41 MRKLRTNFDDLDDNEKEIFLGMDKDDVIQTLAYSGRFPEIGITILDEKSLVTIDSKNKIGMHTLVRAVGREIIRQQSMDMAEAKMHDVFLSFRGEDIRAKFISHLYSSLERR* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0822 112 ProSiteProfiles TIR domain profile. 84 112 IPR000157 GO:0007165
Mtr4g0822 112 SUPERFAMILY "Winged helix" DNA-binding domain 4 77 IPR036390 -
Mtr4g0822 112 Gene3D - 82 112 IPR035897 -
Mtr4g0822 112 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 4 77 - -
Mtr4g0822 112 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 77 IPR044974 GO:0006952
Mtr4g0822 112 SUPERFAMILY Toll/Interleukin receptor TIR domain 83 112 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0822 Mtr-Chr4 10604167 10605085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0822 4 77 WRKY Transcription Factor Family AT5G45050 44.444 2.02e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0822 - - mtr:MTR_4g029110 164.851