Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0818 ATGGAACGAAGTGGAAGTGTGATTATGCAACGATATGAACTAGGGAAATTATTAGGACAAGGAACCTTTGCAAAGGTCTATCATGGAAGGAACCTCAAAAACAGCATGAGTGTGGCCATCAAAGTTATTGACAAAGAGAAGGTTTTGAAGGTTGGAATGATTGATCAAATTAAGCGTGAAATTTCAGTGATGAGACTAATCAGGCATCCACATGTTGTCGAGCTTTATGAGGTAATGGCAAGCAAAACCAAAATTTACGTTGTCATGGAGTATGTAAAAGGCGGTGAGCTATTCAACAAGGTATCTAAAGGAAAGCTCAAGCATGATGAAGCTAGGCGATACTTTCAGCAATTGATCAGTGCTGTTGATTACTGTCATAGTAGAGGTGTTTGTCATCGTGATTTGAAACCAGAAAATCTTCTGTTGGATGAAAACGGAAATTTGAAGGTCTCAGATTTTGGGTTAAGTGCGCTTGCCGAGACTAAACACCAAGATGGATTACTCCATACAACATGTGGCACCCCTGCGTATGTCGCTCCGGAAGTGATAAACCGAAAGGGATACGATGGAACTAAAGCCGATATATGGTCTTGTGGCGTAATCTTATATGTACTATTGGCTGGTTTTCTGCCATTTAGAGATCCGAATTTGATAGAGATGTATCGGAAAATCGGCAAGGCAGATTTCAAGTATCCTAACTGGTTTGCATCGGATGTACGCAGATTGTTGTCAAAAATATTGGATCCAAATCCAAAGACGAGGATATCAATTGCCAAAATTATGGAAAGTTCTTGGTTCAAGAAGGGGTTAGAGAAGCCTATTGTTCCTGACACAAACAACAAAGAACTAGCTCCTCTGGACGTTGATGGAGTATTTGGGGCTTGTGAGAATGGAGATCATGTTGATCTGTCGAAACCTTGTAATAATTTAAATGCCTTTGATATCATCTCCTTTTCGTCAGGTTTTGACTTGTCTGGTTTGTTTGAGGACAATAAAGAACGAAAGACAGAAATGCGGTTTACGTCTAACAAGCCTGCTTCAATCATCATCTCCAAGTTTGAAGAAATTTGTAATCGTCTCGGGCTAAAAGTGAAGAAAAAAGATGGAGGTTTGTTCAAGATAGAAGGTTCCAAGGAAGGAAGGAAAGGACGTCTGGGTATCGATGCAGAGATTTTCGAGATCACACCCGTTTTCCATTTAGTCGAGTTGAAAAAGTCGAACGGCGACACATTGGAGTACCAAAAGCTTGTGAAGGAGAATGTTAGGCCTTCGCTTAAGGACATTGTTTGGAATTGGCAAGGAGAACAACCACAGCAATTGCAACATGGAGCATTGCAGAAAGAGGAACAGGCTTCTGATTCTGGCATATCAGAGATTGTTTTACCAACAACTTCTTAG 1398 0.4063 MERSGSVIMQRYELGKLLGQGTFAKVYHGRNLKNSMSVAIKVIDKEKVLKVGMIDQIKREISVMRLIRHPHVVELYEVMASKTKIYVVMEYVKGGELFNKVSKGKLKHDEARRYFQQLISAVDYCHSRGVCHRDLKPENLLLDENGNLKVSDFGLSALAETKHQDGLLHTTCGTPAYVAPEVINRKGYDGTKADIWSCGVILYVLLAGFLPFRDPNLIEMYRKIGKADFKYPNWFASDVRRLLSKILDPNPKTRISIAKIMESSWFKKGLEKPIVPDTNNKELAPLDVDGVFGACENGDHVDLSKPCNNLNAFDIISFSSGFDLSGLFEDNKERKTEMRFTSNKPASIIISKFEEICNRLGLKVKKKDGGLFKIEGSKEGRKGRLGIDAEIFEITPVFHLVELKKSNGDTLEYQKLVKENVRPSLKDIVWNWQGEQPQQLQHGALQKEEQASDSGISEIVLPTTS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0818 465 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Mtr4g0818 465 Gene3D Transferase(Phosphotransferase) domain 1 3 299 - -
Mtr4g0818 465 PANTHER - 2 445 - -
Mtr4g0818 465 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0818 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Mtr4g0818 465 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 2 445 - -
Mtr4g0818 465 MobiDBLite consensus disorder prediction 443 465 - -
Mtr4g0818 465 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0818 465 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Mtr4g0818 465 SUPERFAMILY Protein kinase-like (PK-like) 8 277 IPR011009 -
Mtr4g0818 465 Pfam NAF domain 308 366 IPR004041 GO:0007165
Mtr4g0818 465 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0818 465 CDD STKc_SnRK3 11 265 - -
Mtr4g0818 465 CDD CIPK_C 311 426 - -
Mtr4g0818 465 Gene3D Kinase associated domain 1, KA1 305 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0818 Mtr-Chr4 10571503 10575059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0818 1 438 CBL-interacting serine-threonine protein kinases AT5G58380 66.958 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mtr4g0818 Pkinase 4.9e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0818 K07198 - gmx:100815651 794.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0818 4 10571503 10575059 Mtr4g0818 4 10571503 10575059 ECH
Mtr4g0818 4 10571503 10575059 Mtr5g2532 5 33183939 33187490 ECH
Mtr4g0818 4 10571503 10575059 Mtr3g1813 3 30606142 30609035 ECH