LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr4g0818	ATGGAACGAAGTGGAAGTGTGATTATGCAACGATATGAACTAGGGAAATTATTAGGACAAGGAACCTTTGCAAAGGTCTATCATGGAAGGAACCTCAAAAACAGCATGAGTGTGGCCATCAAAGTTATTGACAAAGAGAAGGTTTTGAAGGTTGGAATGATTGATCAAATTAAGCGTGAAATTTCAGTGATGAGACTAATCAGGCATCCACATGTTGTCGAGCTTTATGAGGTAATGGCAAGCAAAACCAAAATTTACGTTGTCATGGAGTATGTAAAAGGCGGTGAGCTATTCAACAAGGTATCTAAAGGAAAGCTCAAGCATGATGAAGCTAGGCGATACTTTCAGCAATTGATCAGTGCTGTTGATTACTGTCATAGTAGAGGTGTTTGTCATCGTGATTTGAAACCAGAAAATCTTCTGTTGGATGAAAACGGAAATTTGAAGGTCTCAGATTTTGGGTTAAGTGCGCTTGCCGAGACTAAACACCAAGATGGATTACTCCATACAACATGTGGCACCCCTGCGTATGTCGCTCCGGAAGTGATAAACCGAAAGGGATACGATGGAACTAAAGCCGATATATGGTCTTGTGGCGTAATCTTATATGTACTATTGGCTGGTTTTCTGCCATTTAGAGATCCGAATTTGATAGAGATGTATCGGAAAATCGGCAAGGCAGATTTCAAGTATCCTAACTGGTTTGCATCGGATGTACGCAGATTGTTGTCAAAAATATTGGATCCAAATCCAAAGACGAGGATATCAATTGCCAAAATTATGGAAAGTTCTTGGTTCAAGAAGGGGTTAGAGAAGCCTATTGTTCCTGACACAAACAACAAAGAACTAGCTCCTCTGGACGTTGATGGAGTATTTGGGGCTTGTGAGAATGGAGATCATGTTGATCTGTCGAAACCTTGTAATAATTTAAATGCCTTTGATATCATCTCCTTTTCGTCAGGTTTTGACTTGTCTGGTTTGTTTGAGGACAATAAAGAACGAAAGACAGAAATGCGGTTTACGTCTAACAAGCCTGCTTCAATCATCATCTCCAAGTTTGAAGAAATTTGTAATCGTCTCGGGCTAAAAGTGAAGAAAAAAGATGGAGGTTTGTTCAAGATAGAAGGTTCCAAGGAAGGAAGGAAAGGACGTCTGGGTATCGATGCAGAGATTTTCGAGATCACACCCGTTTTCCATTTAGTCGAGTTGAAAAAGTCGAACGGCGACACATTGGAGTACCAAAAGCTTGTGAAGGAGAATGTTAGGCCTTCGCTTAAGGACATTGTTTGGAATTGGCAAGGAGAACAACCACAGCAATTGCAACATGGAGCATTGCAGAAAGAGGAACAGGCTTCTGATTCTGGCATATCAGAGATTGTTTTACCAACAACTTCTTAG	1398	0.4063	MERSGSVIMQRYELGKLLGQGTFAKVYHGRNLKNSMSVAIKVIDKEKVLKVGMIDQIKREISVMRLIRHPHVVELYEVMASKTKIYVVMEYVKGGELFNKVSKGKLKHDEARRYFQQLISAVDYCHSRGVCHRDLKPENLLLDENGNLKVSDFGLSALAETKHQDGLLHTTCGTPAYVAPEVINRKGYDGTKADIWSCGVILYVLLAGFLPFRDPNLIEMYRKIGKADFKYPNWFASDVRRLLSKILDPNPKTRISIAKIMESSWFKKGLEKPIVPDTNNKELAPLDVDGVFGACENGDHVDLSKPCNNLNAFDIISFSSGFDLSGLFEDNKERKTEMRFTSNKPASIIISKFEEICNRLGLKVKKKDGGLFKIEGSKEGRKGRLGIDAEIFEITPVFHLVELKKSNGDTLEYQKLVKENVRPSLKDIVWNWQGEQPQQLQHGALQKEEQASDSGISEIVLPTTS*	466

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mtr4g0818	465	ProSitePatterns	Protein kinases ATP-binding region signature.	18	41	IPR017441	GO:0005524
Mtr4g0818	465	Gene3D	Transferase(Phosphotransferase) domain 1	3	299	-	-
Mtr4g0818	465	PANTHER	-	2	445	-	-
Mtr4g0818	465	ProSiteProfiles	Protein kinase domain profile.	12	266	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mtr4g0818	465	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	130	142	IPR008271	GO:0004672\|GO:0006468
Mtr4g0818	465	PANTHER	CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10	2	445	-	-
Mtr4g0818	465	MobiDBLite	consensus disorder prediction	443	465	-	-
Mtr4g0818	465	SMART	serkin_6	12	266	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Mtr4g0818	465	ProSiteProfiles	NAF domain profile.	305	329	IPR018451	GO:0007165
Mtr4g0818	465	SUPERFAMILY	Protein kinase-like (PK-like)	8	277	IPR011009	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr4g0818	Mtr-Chr4	10571503	10575059	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr4g0818	1	438	CBL-interacting serine-threonine protein kinases	AT5G58380	66.958	0.0	616

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Mtr4g0818		Pkinase	4.9e-76	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr4g0818	K07198		-	gmx:100815651	794.267

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Event-related genes

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Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
Mtr4g0818	4	10571503	10575059	Mtr4g0818	4	10571503	10575059	ECH
Mtr4g0818	4	10571503	10575059	Mtr5g2532	5	33183939	33187490	ECH
Mtr4g0818	4	10571503	10575059	Mtr3g1813	3	30606142	30609035	ECH

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