Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0794 ATGGAGTCAAAGTGTTGCATGAACGTTGTTTGTGGAACCTCTACGTCGATTCGGTGGCGGAAAGGTTGGATTCTTCGATCCGGTGAATTCGCCGATCTATGTGATAAATGCGGTTCTGCTTATGAGCAATCAGCGTTTTGCGATATGTTCCATGCAAAAGAATCTGGTTGGAGAGAGTGTACTTCATGCGGCAAGCGTCTCCATTGTGGATGTGTTGCTTCAAAGTCTCAGCTTGAAATACTTGACACTGGTGGTGTAAGCTGTATTACCTGTGCAAGTACTTCAGGACTTCAACCTATTGCTAGTAATGAAAATCCTAATGAATCTGGAACAGCAAAAGTAAATAATGTCAGTGCCCAGCAGTGTATAACTCTGGCTAACCAATTAAATGTGAGGGGTATGCAAGTTGGGAATTATGCAGAAAATGACGGGATGAGGTGCTGGCTCAAACCTCACAATGTTGATTTTGATGGACTTTCTAGAGAAATCAAACCTGAAGTTTTACCCTCTGTTGGAGAATTTGGAAGCACTTTGATGTCACAATTTCATCGTGAGTCAAATGGTTCATCTAGGACTGGCAAAGCAGAGAATGACATGCAAGATATATATGAATCACTGGCACAAACAAATTTGAGTATGACCCTTGCCGCTCCTTTGCCAAATCCCTTTCATAATGTCCTTGTTGATGAAAGGGAACAAAGCAAAATGTCACCTCCACTTCTATTGGCGTCTAGATCTCGTCATCTTTTACCTAAACCTCCTAGGCCAGCTCTATCTCCAGGCTTAGAAGGAAACACAGGCATGGTTTCCCAGATTCGTATAGCAAGGCCTCCTGCCGAAGGACGGGGAAGGAATCAGTTGCTTCCGCGATATTGGCCCAGAATTACAGATCAAGAGTTGCAGCAAATATCGGGAGATTCAAATTCCACCATTGTGCCACTCTTTGAAAAGATGCTTAGTGCAAGTGATGCTGGTCGAATTGGTCGCTTGGTTCTTCCAAAAGCATGTGCTGAAGCATATTTCCCTCCTATCTCTCAACCTGAGGGCCTTCCTTTGCGTATCCAAGATGTGAAAGGAAAAGAATGGATGTTTCAATTTAGATTTTGGCCAAATAATAATAGCAGGATGTATGTTTTAGAAGGGGTAACCCCTTGTATTCAGTCTATGCAACTGCAAGCTGGCGATACTGTAACATTTAGCCGTATGGACCCTGAGGGGAAACTTATAATGGGTTTCAGGAAGGCAACGAATTCTGCTTCTCAGGAAACTTTTCCGTCTAATATGCCCAATGGTTCTCATTCAAGTGAAACTTCCTATTCTGGTGTTTATGAGAATATACCTATATTAAGTGGTTATTCTGGCCTTCTTCAGTCTCAAAAGGGTTGTTCAGAAACCCACCTAAATGCGCTCTCTAAAAAGTGGAACTCAGTTGGTGCTGACATGGATTGGCATAATGTTGAAATGCCTGAAAGCAGGAAAAGAGATGTGTTGTCTTTACCACCCGTGCTGGTTCCTGAGAAGAAAAGAACTCGAAATATTGGGTCAAAAAGTAAGAGGTTGCTTATTGACAGCGAGGATGCACTGGAGCTGAAACTTACTTGGGAAGAGGCTCAGGATTTACTTCGTCCACCTCCAGAAGTTAAGCCAAGTGTTGTCATGATCGAGGATCACTTATTTGAAGAGTATGAAGAGCCTCCTGTGTTTGGAAAGAAGAGTATATTTGTGGTACGATCTACTGGGATAAGTGAGCAGTGGACACAGTGTGATAGTTGCCAAAAATGGCGGAAGTTACCGGTTGATGTACTTATTCCCCCCAAGTGGACATGTATGGAAAATTTTTGGGATCAAAGCAGGTGTTCATGTGCTGCTCCCAATGAATTGAATCCGATGGAACTGGATAATCTTTTGAGAATGAACAATGAATTCAAGAAACAAAGACAAGCAGCGGCAAGCCAGAGGCCAGCTCTGGATCGTGAATCTTCTGGTCTTGATGCTTTAGCAAATGCTGCGGTGCTTGGAGATGATGCAAGTGACTCTGGCAGGACACCAGTGTTGACCACTACAAGACACCCTCGTCATAGGCCTGGGTGCTCCTGTATTGTCTGTATCCAGCCACCAAGTGGGAAGGGCAAACACAAACCTACATGCACGTGTAATGTCTGCATGACAGTTAAACGCCGGTTTAAAACCCTGATGATGCGAAAGAAGAAGCGTCAATCTGAGCGGGAAGCTGAGATTGCTCAGAAAAATCAGCAATCATGGAGGACCAAGGATGAATCCGAAGTAGACAGCACCTCTCGACATTTAACTCCAGTTGATGGTTCAGAGAATGAAGCAAGGGTGCCAAATGAATTAGATTCAAGGAACGAAGACCAAGTGGCTGATGCTGCCAAGGGACAATTAGACTTGAATTGCCAGCCGGATCGGGAAGACATGCAAGCCGGACCAAACACTCTGAGCATGATGACTCTTCTTGAAGAAGCGAATCTCCCGTTGGAGACATACCTGAAGCAAAATGGTCTTTCTAGCTTGATATCAGAGCAGCAAACAAATTCAGCTTCAAATGTGCAGGCACATACAACCAATGAGAGTGAGGGAAGACAAAATGAGGATTGCTGTACTGCTTCTGCAGTTCATGAACAGGAAGACAGTCCTGAAGAGAACAGTGGGCAAGACAGAGACCAAAACAATTCACTTTCTTGA 2703 0.4399 MESKCCMNVVCGTSTSIRWRKGWILRSGEFADLCDKCGSAYEQSAFCDMFHAKESGWRECTSCGKRLHCGCVASKSQLEILDTGGVSCITCASTSGLQPIASNENPNESGTAKVNNVSAQQCITLANQLNVRGMQVGNYAENDGMRCWLKPHNVDFDGLSREIKPEVLPSVGEFGSTLMSQFHRESNGSSRTGKAENDMQDIYESLAQTNLSMTLAAPLPNPFHNVLVDEREQSKMSPPLLLASRSRHLLPKPPRPALSPGLEGNTGMVSQIRIARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSTIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWMFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKATNSASQETFPSNMPNGSHSSETSYSGVYENIPILSGYSGLLQSQKGCSETHLNALSKKWNSVGADMDWHNVEMPESRKRDVLSLPPVLVPEKKRTRNIGSKSKRLLIDSEDALELKLTWEEAQDLLRPPPEVKPSVVMIEDHLFEEYEEPPVFGKKSIFVVRSTGISEQWTQCDSCQKWRKLPVDVLIPPKWTCMENFWDQSRCSCAAPNELNPMELDNLLRMNNEFKKQRQAAASQRPALDRESSGLDALANAAVLGDDASDSGRTPVLTTTRHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQKNQQSWRTKDESEVDSTSRHLTPVDGSENEARVPNELDSRNEDQVADAAKGQLDLNCQPDREDMQAGPNTLSMMTLLEEANLPLETYLKQNGLSSLISEQQTNSASNVQAHTTNESEGRQNEDCCTASAVHEQEDSPEENSGQDRDQNNSLS* 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0794 900 Coils Coil 632 652 - -
Mtr4g0794 900 SUPERFAMILY DNA-binding pseudobarrel domain 312 414 IPR015300 -
Mtr4g0794 900 MobiDBLite consensus disorder prediction 732 792 - -
Mtr4g0794 900 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 3 852 - -
Mtr4g0794 900 MobiDBLite consensus disorder prediction 847 875 - -
Mtr4g0794 900 MobiDBLite consensus disorder prediction 876 890 - -
Mtr4g0794 900 MobiDBLite consensus disorder prediction 752 766 - -
Mtr4g0794 900 Gene3D - 582 638 - -
Mtr4g0794 900 ProSiteProfiles B3 DNA-binding domain profile. 315 416 IPR003340 GO:0003677
Mtr4g0794 900 Gene3D - 293 420 IPR015300 -
Mtr4g0794 900 MobiDBLite consensus disorder prediction 847 900 - -
Mtr4g0794 900 SMART B3_2 315 415 IPR003340 GO:0003677
Mtr4g0794 900 Pfam B3 DNA binding domain 315 414 IPR003340 GO:0003677
Mtr4g0794 900 Pfam CW-type Zinc Finger 584 626 IPR011124 GO:0008270
Mtr4g0794 900 ProSiteProfiles Zinc finger CW-type profile. 579 629 IPR011124 GO:0008270
Mtr4g0794 900 CDD B3_DNA 313 414 IPR003340 GO:0003677
Mtr4g0794 900 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0794 Mtr-Chr4 10265203 10273311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0794 1 851 B3 DNA Binding Superfamily AT4G32010 50.525 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mtr4g0794 B3 1.4e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0794 - - gmx:100778833 1585.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0794 4 10265203 10273311 Mtr4g0794 4 10265203 10273311 ECH