Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0785 ATGGAGTCAGTCGCTGCTAAAAAAAGAAAGGTGAGCACCACCTATATACCTGATGAAATTGCCTTCTCTATTTTATCCAAATTGCCTTTTAAATCCATTAAACGGTTTGAATGCATTCGCAAAGCATGGTCTCTCTTATCTGAAAACCCTCACTTCATGAACATGTTCTACAAGAATCTTTTATCTAATTCTCACCAATGTCCTTATTACGATGGGGGATCTCTGCTCCTAAGGGATTTCGAACTTGGTAAAGACGTTTTCTATTCTATTTCTGGTGAAAGGTTTGAGAACAAAGTTCAATTAGATTTCTCAAATGCATATGCAGACCGTTTCAAATTTCGTATTTTTGGCTTTGGTAGTATTAATGGCACATTTTGTCTCTATCAAGATTATTATTATGGCAAAACTCTATTGTGGAACCCATCGGCACATGCAATCAAGCTCGTTCCCAGTCAGGATGAGTTAGTTGAGTCGTCTATTGAAGATGTTGTGGATTTTGTTAGCATACATGATACGTATTATCTTCATGGATTTGGCTACGACAATCTTAGAAATGACTATAAGGTCATCTGTCACGTAACTATTACGGGTGAACACGCTGGCTATGGATGTATGTCTTTAGACCCAATTTGGGTGATATATAGCTTAAGAACTAACTCGTGGAGGATACTTGATGTTTCTAGCATGCCTTGTTCATTGGCACGTATTGACGGCACTCAAGTCTACATGGATGGTGTGTGTCATTGGTTGGCTGAAGAAGTTGATGATACCCTGGAGGGACCATGTGTGGTATCATTTTACTTGAGCAATGAGGAATTCTTCATAACATACATACCCTCATACTTAGATGATTGTTTCAATCTTCACACCTTGTGGATAAACTTGGCGGTGTTAAATGGGTCCATTGCATTGATCTCATATCATGAAGAGACGACAAATTTTCACATATCAATTTTGGGTGAATACGGTATAAAGGAGTCATGGACCAAACTCTTCATGGTTGGACCGTTGTCTTGCATTGAGCGTCCTATTGGAGTGGGAACGAAAGGAGAAATATTCGTCATCAGACAAGATAAAGAACTAGTTTGTCTTGATTTAAGTACTCAAATGATTGTGGAGCTTGCTTACAAAGAAGTGAATTCTATTGATCGGATAGTAATGTACAAGGAAACATTCTTCCAATTGGAGGAATAA 1194 0.3827 MESVAAKKRKVSTTYIPDEIAFSILSKLPFKSIKRFECIRKAWSLLSENPHFMNMFYKNLLSNSHQCPYYDGGSLLLRDFELGKDVFYSISGERFENKVQLDFSNAYADRFKFRIFGFGSINGTFCLYQDYYYGKTLLWNPSAHAIKLVPSQDELVESSIEDVVDFVSIHDTYYLHGFGYDNLRNDYKVICHVTITGEHAGYGCMSLDPIWVIYSLRTNSWRILDVSSMPCSLARIDGTQVYMDGVCHWLAEEVDDTLEGPCVVSFYLSNEEFFITYIPSYLDDCFNLHTLWINLAVLNGSIALISYHEETTNFHISILGEYGIKESWTKLFMVGPLSCIERPIGVGTKGEIFVIRQDKELVCLDLSTQMIVELAYKEVNSIDRIVMYKETFFQLEE* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0785 397 ProSiteProfiles F-box domain profile. 10 60 IPR001810 GO:0005515
Mtr4g0785 397 PANTHER OS09G0372900 PROTEIN-RELATED 12 386 - -
Mtr4g0785 397 SUPERFAMILY F-box domain 14 196 IPR036047 GO:0005515
Mtr4g0785 397 PANTHER CYCLIN-LIKE F-BOX, F-BOX PROTEIN INTERACTION DOMAIN 12 386 - -
Mtr4g0785 397 TIGRFAM F_box_assoc_1: F-box protein interaction domain 120 358 IPR017451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0785 Mtr-Chr4 10155220 10158270 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0785 168 365 Carbohydrate Esterase AT1G25141 25.123 6.95e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0785 - - mtr:MTR_6g079810 422.55