Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0784 ATGGAGTCAGTCGCTGCAAAAAAAAGAAAGGTGAGCACAACCTGTATATCTGATGATATTGCCTTCTCTATTCTATCCAAATTGCCTTTTAAATCTATTAAGCGATTTGAATGCGTTCGTAAATCATGGTCTCTGATCTTATCTGAAAACCCTCACTTCATGAACATGTTCTACAAGAATCTTTTATCTAATTCTCACAGATATCCTTATTACGATGGAGCATCTCTTCTTCTAAAGGATTTAGAACTTGGTAAAGAAGTTTTCTATTCTATTTATGGTGAAAGGTTTGAGAACAAAGTACAATTAGATTTCACAAATCCATTTGCAAACCGTTTCAATTTTCGTATTTTTGGTTTTGGTAGTATTAATGGCACACTTTGTCTCCATCAAGATGATTATAATGGCAAAACTCTATTGTGGAACCCATCTACACATGCAATCAAGCTCATTCCCCCCACTCCATATGAGTTAGTTGAGTCGTCTATTGACGAAGATGTTGAAGATTTTGATAGTATAGATGATACATCTTATCTTCATGGATTTGGTTACGATGAACTTAGAAATGACTATAATGTCATTTGTTATGTATCTATTATGGGTGAGCACGCTGGTTACGGTGATATGACTTTAGACCCGTTCTGGAAGATATATAGCTTAAGAACTAACTCGTGGAGGATACTTGATGTTTTTGACATGCCTTATTCTTTGGCATGTATTGACGGCACTCAAGTCTACATGAATGGTGTGTGTCATTGGTTGTGTGAAGAAGAAGAAGATAGTCAGGATGGACCATGTTTGGTATCATTTTACTTGAGCAATGAGAAATTCTTCATAACACCCGTTCCCTCATACTTGGATGATTGTTTCGATGTTCAAGCATTGTGGATAAACTTGGTGGTGTTAAACGGGGCCATTGCGTTGATCTCATATCATGAAGAGACGACTAATTTTCACATATCGATTTTGGGTGAATATGGCATTAAGGAATCGTGGACCAAACTCTTCCTTGTTGGACCGTTGTCTTGCATTGAGCGTCCTATCGGAGTGGGGACAAAAGGAGAAATATTCGTCATCAGAAAAGATAAAGAGCTAGTTTGTATTGATTTAAGTACTCAAATGATTGTGGAGCTTGTTTACAAAGAAGTGAATTCTATTGATAGGATAGTAATATACAAGGAAAATATTCTTCCAATTGGAGGAATAAGTAATTAG 1212 0.363 MESVAAKKRKVSTTCISDDIAFSILSKLPFKSIKRFECVRKSWSLILSENPHFMNMFYKNLLSNSHRYPYYDGASLLLKDLELGKEVFYSIYGERFENKVQLDFTNPFANRFNFRIFGFGSINGTLCLHQDDYNGKTLLWNPSTHAIKLIPPTPYELVESSIDEDVEDFDSIDDTSYLHGFGYDELRNDYNVICYVSIMGEHAGYGDMTLDPFWKIYSLRTNSWRILDVFDMPYSLACIDGTQVYMNGVCHWLCEEEEDSQDGPCLVSFYLSNEKFFITPVPSYLDDCFDVQALWINLVVLNGAIALISYHEETTNFHISILGEYGIKESWTKLFLVGPLSCIERPIGVGTKGEIFVIRKDKELVCIDLSTQMIVELVYKEVNSIDRIVIYKENILPIGGISN* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0784 403 Pfam F-box associated 244 373 IPR006527 -
Mtr4g0784 403 PANTHER CYCLIN-LIKE F-BOX, F-BOX PROTEIN INTERACTION DOMAIN 13 389 - -
Mtr4g0784 403 SUPERFAMILY F-box domain 16 67 IPR036047 GO:0005515
Mtr4g0784 403 TIGRFAM F_box_assoc_1: F-box protein interaction domain 121 361 IPR017451 -
Mtr4g0784 403 PANTHER OS09G0372900 PROTEIN-RELATED 13 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0784 Mtr-Chr4 10141896 10146097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0784 188 368 Carbohydrate Esterase AT1G25141 27.027 2.14e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0784 - - mtr:MTR_6g079810 462.225