Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0773 ATGGCAAAAGAACACGAAGGACGTGCAGTGGGTATAGATCTTGGAACAACCTATTCTTGTGTTGCTGTGTGGCTTGATCAACACCAAAGAGTTGAGATTATTCACAATGATCAAGGAAACCGAACAACACCTTCTTTTGTTGCTTTCAACAATGAGCAAAGGTATGGTGATGCTGCTAAGAATCAATCTGCTACTAACCCTGAAAACACTATCTTTGATGCTAAGAGATTAACTGGTAGGAAGTTTAGTGATCTGGTTGTTCAAAGAGATATATTGTTGTGGCCATTCAAGGTTATTTCTGGTGTTAATGACAAACCTATGATTACTGTTAACTACAAGGGTCAAGAGAAGCACTTTTGTGCTGAGGAAATATCTTCTATGTTGCTTACAAAGATGAGAGAGGTTGCGGAGGCATATTTGGGGTCGCCGGTCAAGAATGCCGTTGTTACCGTGCCAGCTTACTTCAATGATTCTCAGCGAAAGGCCACCATAGATGCTGGTACTATTGCTGGCCTTAATGTCATTCGGATAATCAATGAACCTACTGCTGCAGCTATTGCATATGGCCTTGATAAGAGAAATGACTGTGATGGTAACCGAAATATTTTTGTCTTTGATCTGGGTGGCGGTACTTTTGATGTGTCTATCCTCACAATTAAGGGTGATCTATTTGAAGTAAAAGCCACCGCAGGAAACACGCACCTTGGAGGCGAGGACTTTGATAACAGAATGGTTAACTATTTTGTGGAAGAGTTAAAAAAGAAGAATAAAGTGGACATCAAGCAGAACCCAAAATCCTTAAGGAGGTTGAGAACTGCCTGTGAGAGGGCAAAAAGGATACTGTCTTTTGCTTTTGTTACCACTGTTGAGGTAGATGCTTTATTTATGGGAATCGACTTTTCTTCATCAATCACTCGTGCCAAATTTGAGGAACTTAACATGGACTTTTTCAATGAGTGTATGAATATTGTTGACACCTGTCTCAGGGATTCAAAGATATACAAGAGTAATATTGATGATATTGTTCTTGTGGGTGGCTCGTCTAGGATTCCGAAAGTGCAAGAACTATTGCTAGAATTTTTCAAGGGGAAGGAATTATTCATGGGTATCAACCCAGATGAGGCTGTTGCTTATGGTGCAGCTGTTCAAGCTGCTATTTTGAGTGAAGGCTTTAAGAATGCGCCCAACTTGGTGCTACGAGATGTTACCCCATTGTCACTTGGTATCGCAACATATAAGGAAAATATCATGAGTGTGGTGATTCCTAGAAACACTTCCATACCTGTCAAGAAGACAAATGGATATTTCACCCTTTATGATAACCAGTGCATTGTCGATTTTCCTGTTTATGAGGGTGAGAGACCAAGAGCTACTGACAATAATCTGCTTGGTTCATTTCGGCTTCATTGTCTTCCAGCTCCCCGTGGCCATCCCTTGGAGGCCTGCTTTTCGATTGATGAAAATGGCATCCTAACTGTTACTGCTAGGGAAATATCTACAGGCAATATGAACGCAATCACCATTACTAATGACAAAGAAAGGTTGTCAATGTTCGACATTGAAAAAATGATTAAAGAAGCTGCGAAATATCATGTGGAAGATATGCAATTTTTAAGAAGGGCCAAGGTAATGTGTGCATTAGATTCTTGTGTTTACAATATGAAGAACGCTTTAAAGAAGAACAATGTTAATCTGATTCTCACGCCTCAAGAAATTGAGAAGATCAACAATGCAATTACTGTTGCTATGAATTTGCTTGATAAGAATAACAAAGAGAAAGAAATAGATGTTCTTGAGGGTCATCTGGAGGATCTAGAGAGCATGTCGAAGCACCTTATATCCAAGGCTAATAATTTTATTTTTCTTGGATAA 1872 0.3958 MAKEHEGRAVGIDLGTTYSCVAVWLDQHQRVEIIHNDQGNRTTPSFVAFNNEQRYGDAAKNQSATNPENTIFDAKRLTGRKFSDLVVQRDILLWPFKVISGVNDKPMITVNYKGQEKHFCAEEISSMLLTKMREVAEAYLGSPVKNAVVTVPAYFNDSQRKATIDAGTIAGLNVIRIINEPTAAAIAYGLDKRNDCDGNRNIFVFDLGGGTFDVSILTIKGDLFEVKATAGNTHLGGEDFDNRMVNYFVEELKKKNKVDIKQNPKSLRRLRTACERAKRILSFAFVTTVEVDALFMGIDFSSSITRAKFEELNMDFFNECMNIVDTCLRDSKIYKSNIDDIVLVGGSSRIPKVQELLLEFFKGKELFMGINPDEAVAYGAAVQAAILSEGFKNAPNLVLRDVTPLSLGIATYKENIMSVVIPRNTSIPVKKTNGYFTLYDNQCIVDFPVYEGERPRATDNNLLGSFRLHCLPAPRGHPLEACFSIDENGILTVTAREISTGNMNAITITNDKERLSMFDIEKMIKEAAKYHVEDMQFLRRAKVMCALDSCVYNMKNALKKNNVNLILTPQEIEKINNAITVAMNLLDKNNKEKEIDVLEGHLEDLESMSKHLISKANNFIFLG* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0773 623 SUPERFAMILY Actin-like ATPase domain 9 192 IPR043129 -
Mtr4g0773 623 ProSitePatterns Heat shock hsp70 proteins family signature 3. 341 355 IPR018181 -
Mtr4g0773 623 Coils Coil 588 608 - -
Mtr4g0773 623 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Mtr4g0773 623 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 546 616 IPR029048 -
Mtr4g0773 623 Gene3D - 193 367 - -
Mtr4g0773 623 Gene3D - 72 127 - -
Mtr4g0773 623 Pfam Hsp70 protein 9 615 IPR013126 GO:0005524|GO:0140662
Mtr4g0773 623 Gene3D Actin; Chain A, domain 4 236 319 - -
Mtr4g0773 623 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 392 543 IPR029047 -
Mtr4g0773 623 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Mtr4g0773 623 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 543 IPR029047 -
Mtr4g0773 623 PRINTS 70kDa heat shock protein signature 370 390 - -
Mtr4g0773 623 PRINTS 70kDa heat shock protein signature 476 492 - -
Mtr4g0773 623 PRINTS 70kDa heat shock protein signature 147 167 - -
Mtr4g0773 623 PRINTS 70kDa heat shock protein signature 210 220 - -
Mtr4g0773 623 PRINTS 70kDa heat shock protein signature 8 21 - -
Mtr4g0773 623 PRINTS 70kDa heat shock protein signature 338 354 - -
Mtr4g0773 623 PRINTS 70kDa heat shock protein signature 38 50 - -
Mtr4g0773 623 PRINTS 70kDa heat shock protein signature 59 67 - -
Mtr4g0773 623 PRINTS 70kDa heat shock protein signature 396 415 - -
Mtr4g0773 623 Gene3D - 10 385 - -
Mtr4g0773 623 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Mtr4g0773 623 PANTHER HEAT SHOCK PROTEIN 70KDA 4 617 IPR013126 GO:0005524|GO:0140662
Mtr4g0773 623 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 617 - -
Mtr4g0773 623 Gene3D - 544 618 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0773 Mtr-Chr4 9890011 9892186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0773 1 615 Calmodulin-binding Proteins AT3G12580 62.520 0.0 764