Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0769 ATGAGCTTCCAACGGAGGGATAATAGGGTTCCTCGTCGTCGTCAGCAATGGACTCCTAGACCATCCTCAACTACCAACCAGTTATTACCTCAACTTCTGCAAGAGATTCAGGACAAGCTTACCAAAGGCACCGTCGAATGCATGATTTGCTACGACATTGTGCGCAGATCTTCCCCTATCTGGTCATGCTCTAGTTGCTACTCCATCTTTCACCTCAACTGTACAACCAAGTGGGCTCGTGCACCAACTTCATCATCCCAAACTAGCATTGATTGGCGCTGCCCCGGCTGTCAATCTGTGCAACTCACCTCATCCAATTCCATCAGGTACTTTTGCTTTTGTGGGAAGACACCTGACCCTGCATCTGACTTTTATCTCACGCCACATTCATGTGGAGAACCTTGTGGGAAGCCTCTTCAAAAGACGGGGGATCTTTGCCCTCATGTTTGTGTCTTGCAATGTCATCCTGGTCCGTGTCCTCCTTGCAAAGCATTTGCCCCTCCTCGTTTGTGCCCTTGTGGCAAGATTACTATTACCACTCGTTGTTCCGACGACCAATCCCTTATTACATGTGGACAACAATGTCAAAAGCTTCTTCAATGTGGGCGTCATCGCTGTCACCAAATTTGTCATCTCGGTCCTTGTGACCTGTGTCGTGTTCCAATCGACGCCTCTTGCTTTTGCAAGAAAAGTTTGGAGGTTATTCTTTGTGGGGACATGGCTGTCAAGGGTGAATACAAAGCAGAAGCTGGAGTTTATTCCTGTGGTTCCACCTGTGGAAACAAACTTGCATGTGGTAATCACATGTGTATTGAGACCTGTCATCCGGGAAGTTGTGTTGAGTGTCCATTGTTGCCAACCAATGTTAAGACATGCTTCTGCGGGAAAACTAGGTTGGGTGAGGAACGGCTGAGTTGTTTAGACCCAATTCCTACATGTTCACAAGTATGTGGCAAGACCCTTCCTTGCGGTATGCATCATTGTACACTGACATGCCATGACGGGGATTGTTCTCCTTGTTCAGTTTTAGTCTCCCAGAAGTGTCGGTGTGGCTCAACTTCCAAAACGGTGGAGTGCTGTAAGAAAACAATGGCGAATGAGAAATTTACTTGTGAAAAGCCTTGTGGGAAGAAAAGGAATTGTGGAAGGCATCGTTGTAGTGAACGGTGTTGTCCGCTCTCTAATCCAAATAATATTCTAAATGCAACGGATTCGGATCCACATCTATGTTCCATTCCATGTGGAAAGAAGCTACGTTGTGGGAAGCATGCGTGTGATTCCAATTGTCACAGTGGTCATTGCCCACCTTGTCTTGAAACTATATTCACTGATTTGACATGTGCTTGTGGCAAGACTTCAATCCCTCCTCCACTGCCATGTGGTACACCGTCGCCTTCATGTCAACTTCCATGTTCAGTTCCTCAACCTTGTGGCCATCCAGCATCCCATAGTTGTCATCATGGAGATTGCCCTCCCTGTGTGGCTCCTGTAGCAAGAGAATGTGTTGGTGGGCATGTAGTTCTTAGGAACATACCATGTAGCTCAAGGGATATAAGATGTAATAAGCTCTGTGGAAAGACTAAACAATGTGGTTTACATGCCTGTAGCAGAATATGTCACTCCTCACCTTGTGATAATCAGCATGTTGTGCAAGGTATTCGAACTTCATGCGGGCAATCATGTGGCGCTCCGAGGAGAGACTGCCGACATACATGTACAGCTCCTTGTCACCCTTCATCTCCATGTCCAGATAGAAGATGTGGATTCGCTGTCGCAATCACCTGTACATGTGGTCGTTTAACAACAAATGTCCCATGTGATGCTGGTGGTAGTGATGTTGATTCTATGCATGAAGCTTCCATTATTCAAAAGTTGCTTGTGCCACTTCAACCGTTGGATCCAAATGGCAAAAAAGTTCCTCTTGGACAGCGAAAACTGATGTGTAATGATGAGTGCGCTAAGTTGGAGCGTAAAAGGGTTCTTGCAAATGCTTTTGAGATTAGCACTCCAAATCTAGATTCCTTCCAATTTGGTGAGAATTCTGTTGCTCATTCTGAATTACTTGCTGATTTATTGAGGCGTGATAGTAAATGGGTTTTGTCCGTCGAGGAGAGATGCAAGTATTTAGTACTTGGCAAGGGTAAAGGAACTACACATGGTCTAAAATCCCATGTTTTCTGTCCCATGCTAAAGGATAAGAGAGATGCAGTGAGGATGATTGCTGATAGATGGAAGCTTGCAATAAATGAAGCTGGTCGGGAGCCAAAGAAATTTATAGTTGTTCATGTTGTCCAAAAATCAAGAGCTCCATCACGCGTGCTAGGGATTAAGGGTACTACAACCATACCTTCTCTCCTTCCTCCTGCATTTAACTCTTTAGTAGACATGGACCCTCGATTGGTCGTCTCTTTTCCAGACTTACCAAGAGATACAAATATTTGTGCATTGGTGTTGAGATTTGGTGGTGAGTGTGAACTTGTTTGGTTAAATGATAAAAATGCATTGGCTGTTTTTAACGATCCTGCCCGATCTGCAACTGCAATGAGAAGGTTGGATCATGGAAGTGTATATCAAGGAGCTATTGTGGCTGTTCCAAACACAGGGACATCTGTAGCATCTTCAGTTACAACTGACCGAGGAGGAGCTGAGACAGTGAAAGGCGGTGCGCTGACAACATTGACGGGTTATATGTGGAAACAGGCTGTTATTATAGAACCAGCTTGTAGAGAAGATTCTTGGGATGATCAAGAGGGGACTACTGATTGTGCAAATATTCAATCATCTATTTGGAAGAAAGAAGCACCAATTTCTACTTCATCAAATCCTTGGACTGTCTTAAATCAAGAATGGTCTTCAAGTTCATCTGCTAATGCTTCTATTAAAGCTGACACTAATATGAAACAAACTGAAAGTAATTCTGTGGCAAAGTCAGAATCTGGTGATGGTGGTTCAAATCTAGAACACCAGCATGGAAGAGCCTTTGACACTTTGGAAGCTTATGATGTAGTAGATGATTGGGAGACTACTTGTGAATGA 3036 0.444 MSFQRRDNRVPRRRQQWTPRPSSTTNQLLPQLLQEIQDKLTKGTVECMICYDIVRRSSPIWSCSSCYSIFHLNCTTKWARAPTSSSQTSIDWRCPGCQSVQLTSSNSIRYFCFCGKTPDPASDFYLTPHSCGEPCGKPLQKTGDLCPHVCVLQCHPGPCPPCKAFAPPRLCPCGKITITTRCSDDQSLITCGQQCQKLLQCGRHRCHQICHLGPCDLCRVPIDASCFCKKSLEVILCGDMAVKGEYKAEAGVYSCGSTCGNKLACGNHMCIETCHPGSCVECPLLPTNVKTCFCGKTRLGEERLSCLDPIPTCSQVCGKTLPCGMHHCTLTCHDGDCSPCSVLVSQKCRCGSTSKTVECCKKTMANEKFTCEKPCGKKRNCGRHRCSERCCPLSNPNNILNATDSDPHLCSIPCGKKLRCGKHACDSNCHSGHCPPCLETIFTDLTCACGKTSIPPPLPCGTPSPSCQLPCSVPQPCGHPASHSCHHGDCPPCVAPVARECVGGHVVLRNIPCSSRDIRCNKLCGKTKQCGLHACSRICHSSPCDNQHVVQGIRTSCGQSCGAPRRDCRHTCTAPCHPSSPCPDRRCGFAVAITCTCGRLTTNVPCDAGGSDVDSMHEASIIQKLLVPLQPLDPNGKKVPLGQRKLMCNDECAKLERKRVLANAFEISTPNLDSFQFGENSVAHSELLADLLRRDSKWVLSVEERCKYLVLGKGKGTTHGLKSHVFCPMLKDKRDAVRMIADRWKLAINEAGREPKKFIVVHVVQKSRAPSRVLGIKGTTTIPSLLPPAFNSLVDMDPRLVVSFPDLPRDTNICALVLRFGGECELVWLNDKNALAVFNDPARSATAMRRLDHGSVYQGAIVAVPNTGTSVASSVTTDRGGAETVKGGALTTLTGYMWKQAVIIEPACREDSWDDQEGTTDCANIQSSIWKKEAPISTSSNPWTVLNQEWSSSSSANASIKADTNMKQTESNSVAKSESGDGGSNLEHQHGRAFDTLEAYDVVDDWETTCE* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0769 1011 CDD NF-X1-zinc-finger 410 462 - -
Mtr4g0769 1011 MobiDBLite consensus disorder prediction 1 25 - -
Mtr4g0769 1011 CDD NF-X1-zinc-finger 255 298 - -
Mtr4g0769 1011 Pfam NF-X1 type zinc finger 561 583 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 Pfam NF-X1 type zinc finger 201 219 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 Pfam NF-X1 type zinc finger 420 437 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 Pfam NF-X1 type zinc finger 323 341 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 Pfam NF-X1 type zinc finger 530 545 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 Pfam NF-X1 type zinc finger 381 392 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 Pfam NF-X1 type zinc finger 265 283 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 Pfam NF-X1 type zinc finger 148 163 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 CDD NF-X1-zinc-finger 191 239 - -
Mtr4g0769 1011 SMART znfxneu3 477 495 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 SMART znfxneu3 381 412 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 SMART znfxneu3 201 220 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 SMART znfxneu3 530 559 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 SMART znfxneu3 420 439 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 SMART znfxneu3 568 589 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 SMART znfxneu3 265 284 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 SMART znfxneu3 323 342 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 SMART znfxneu3 146 164 IPR000967 GO:0005634|GO:0008270
Mtr4g0769 1011 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 2 1008 IPR034078 GO:0003700
Mtr4g0769 1011 CDD RING-CH-C4HC3_NFX1 46 98 - -
Mtr4g0769 1011 CDD NF-X1-zinc-finger 467 515 - -
Mtr4g0769 1011 ProSiteProfiles Zinc finger RING-type profile. 47 98 IPR001841 -
Mtr4g0769 1011 CDD NF-X1-zinc-finger 313 361 - -
Mtr4g0769 1011 MobiDBLite consensus disorder prediction 957 994 - -
Mtr4g0769 1011 MobiDBLite consensus disorder prediction 957 984 - -
Mtr4g0769 1011 ProSitePatterns Zinc finger PHD-type signature. 47 97 IPR019786 -
Mtr4g0769 1011 ProSiteProfiles Zinc finger PHD-type profile. 44 100 IPR019787 -
Mtr4g0769 1011 SUPERFAMILY RING/U-box 38 102 - -
Mtr4g0769 1011 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 2 1008 - -
Mtr4g0769 1011 CDD NF-X1-zinc-finger 131 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0769 Mtr-Chr4 9864156 9868239 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Mtr4g0769 zf-NF-X1 1.3e+02 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0769 K12236 - gmx:106799700 1605.88