Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0742 ATGTCCTCTTCATCATCCACTTCCTTTTCACCGGACCAGCAACAACAGCAACAACTCTCTCCTTCGGACCAGCTTTGTTATGTCCATTGCAATTTCTGCGACACTGTTCTCGCGGTGAGTGTTCCTTGCACAAGTTTGTTCAAGACTGTGACAGTGAGATGTGGTCATTGCACCAACCTTCTCTCAGTTAACATGCGTGCTTTGCTCCTTCCTGCTCCTAATCAGCTTCACCTTGGACACACTTACTTCAACCCTCAAACTCTTATGGAGGAGATTCGAAATGCACCTTCAACAAACATGATGATGAATCAGCTTCCAAATCCAAATGATTTGATGATGAACACAATGAGAGGAGGGCATCATGAAGAAATCCCTAAACCTCCACCTGCTAATAGACCTCCGGAGAAGAGACAGAGAGTTCCATCTGCCTACAACCGCTTCATCAAAGATGAGATCCAACGTATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCTTTTAGTGCAGCTGCAAAGAATTGGGCCCACTTTCCACACATTCATTTCGGACTTATGCCTGATCATCAACCCGTGAAGAAAGCTAATGTTCGTCAGGATTCAGAGGACGTGCTTATGAAAGATGGGTTTTTCACACAAGCAAATGTAGGTGTCTCTCCCTACTAA 666 0.4505 MSSSSSTSFSPDQQQQQQLSPSDQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRALLLPAPNQLHLGHTYFNPQTLMEEIRNAPSTNMMMNQLPNPNDLMMNTMRGGHHEEIPKPPPANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANVRQDSEDVLMKDGFFTQANVGVSPY* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0742 221 MobiDBLite consensus disorder prediction 117 140 - -
Mtr4g0742 221 Gene3D High mobility group box domain 125 182 IPR036910 -
Mtr4g0742 221 SUPERFAMILY HMG-box 130 179 IPR036910 -
Mtr4g0742 221 PANTHER PROTEIN YABBY 6-RELATED 1 219 IPR006780 GO:0007275
Mtr4g0742 221 Pfam YABBY protein 21 185 IPR006780 GO:0007275
Mtr4g0742 221 MobiDBLite consensus disorder prediction 117 133 - -
Mtr4g0742 221 PANTHER PROTEIN YABBY 4 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0742 Mtr-Chr4 9397022 9400445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0742 32 219 C2C2-YABBY Transcription Factor Family AT4G00180 61.722 7.32e-69 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mtr4g0742 YABBY 8.4e-74 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0742 K25796 - gmx:100794423 377.481