Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0740 ATGCAATTCAAGCTAGGGAAGAAAGTGATTCGGGTCAGTAAATGGATATTCCGGACAAGACTGAGATACCGTCGTCTTGGTGCCTCACCGGAGAAGAATCATTTGACGACGAAGCTTCTATCATGGGGGAGGAAGATAACTACAAAAGCAAGGTCTCTATGTTCAAAAGCAGGGTCGGGTAAATTTGGTTATTTGCCGGTAGGATCCGACCCGGTTGAGCAAAGCGGTTCCCCGGTGCCGAAGGGGCATTTAGCGGTGTATGTTGGGCAGAAAGACGGTGAGTTTCGGCGGGTTTTGGTGCCGGTGGTTTATTTCAACCATCCTTTGTTTGGGGAATTGTTGAAAGAAGCTGAGAAGGAGTATGGGTTTTGTCATCAAGGTGGAATCACTATTCCTTGTCGGGTTACCGAGTTTGAACGGGTTAAGACCCGAATAGCATCCGGGTCAGATACGCGGAGATTGACGAGGCGGGGACATTTTGACGGCTGA 489 0.4908 MQFKLGKKVIRVSKWIFRTRLRYRRLGASPEKNHLTTKLLSWGRKITTKARSLCSKAGSGKFGYLPVGSDPVEQSGSPVPKGHLAVYVGQKDGEFRRVLVPVVYFNHPLFGELLKEAEKEYGFCHQGGITIPCRVTEFERVKTRIASGSDTRRLTRRGHFDG* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0740 162 PANTHER SMALL AUXIN-UP RNA-RELATED 3 157 - -
Mtr4g0740 162 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 157 IPR003676 GO:0009733
Mtr4g0740 162 Pfam Auxin responsive protein 57 142 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0740 Mtr-Chr4 9336460 9337627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0740 74 138 Calmodulin-binding Proteins AT3G43120 52.941 7.08e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0740 K14488 - gmx:100796005 201.06