Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0738 ATGATATCTTTTCGTTTGTTTGTAACACTTTTGGTTCCTTTTTTACTTGCCACTTTTGTTTCTTCTTATTCCATGAATGAAGTTAAACTTTGGTGTAACCAAACACCTAATCCTCAACCTTGTGTGTATTTCTTGAGCAATAACCCTTCTTATAAACACAAACTCATCAAACAAAAAGTTGATTTCTTCAAACTTTCATTGGAACTTGTTCAAGAAAGAGCACTTAAAGGCCATGCAAAAACTCTTTCATTAGGCTCCAAATGTAGTAACTCACGTGAAAAATCAGCTTGGGCTGATTGTGTTGAGCTATATGAACAAACCATCCTTAAGCTCAACAAAACCCTAAACCCTAAAACAAAGTGTTCTCAAGTTGATGCTCAAACATGGCTAAGCACTGCTCTCACCAACCTTGAGACATGTAAAGCTGGATTCTACGATCTTGGTGTTCAAGATTATATTCTTCCTCTCATGTCCAACAATGTTACTAAATTGCTAAGTAACACTTTGGCTCTTAACAAAGTTCAATATCAAGAACCTAGCTACAAAGATGGGTTCCCAACATGGGTTAGGCCAGGTGATAGAAAGCTATTACAAACTTCATCGCCTCGACCTAACGTAGTAGTAGCAAAAGACGGGTCGGGGAAGTACACAACTGTTAGTGCAGCCGTGAATGCTATACCAAAGAATAACAAAGGTAGGTATGTTATACATGTGAAGGCTGGTGTCTATAATGAACAAGTTGAGATAAAGGCAAAGAATATTATGTTGGTTGGAGATGGTATTGGTAAAACTATAATTACTGGAAGCAAAAGCGTTGGAGGAGGAACCACAACATTCCGTTCTGCCACTGTTGCTGTTGTTGGAGATGGATTTATTGCTCAAGATATCACATTTAGGAACACTGCCGGTGGAAAGAACCATCAAGCTGTTGCATTGCGTTCCGGATCAGACTTGTCTGTATTTTATAGATGTAGTTTTGAAGGTTTTCAAGACACATTATATGTGCATTCAGATAGACAATTCTACAAACAATGTAACATTTACGGTACAGTTGATTTCATCTTTGGTAACGCTGCTGCAGTGTTCCAAAATTGTAACATATTTCCAAGAAACCCTCCAAACAAAGTTAACACAATCACTGCACAAGGTAGAACAGATCCTAACCAAAACACTGGCATTTCTATTCACAATTCTAGGGTCACCGCTGCTTCGGATTTGAAACCGGTCCAAAATTCTGTTAAGACTTATCTTGGAAGACCATGGAAGCAATATTCTAGGGCAGTTTTTATGAAGACTTCTCTTGATAGTTTGATTCATCCATCTGGTTGGTTAGAATGGAGTGGTAATTTTGCATTAAGTACTTTATATTATGGAGAGTATATGAACACTGGTCTTGGTTCTTCCACAAGAAACCGTGTCAAATGGCAAGGTTTTCATGTGATAACAAGTGCTTCTGAAGCATCAAAGTTTACCGTATCAAATTTCATTGCTGGAAATGCATGGTTACCTGCAACCAAAGTGCCATTTACATCTACTCTTTAA 1542 0.3787 MISFRLFVTLLVPFLLATFVSSYSMNEVKLWCNQTPNPQPCVYFLSNNPSYKHKLIKQKVDFFKLSLELVQERALKGHAKTLSLGSKCSNSREKSAWADCVELYEQTILKLNKTLNPKTKCSQVDAQTWLSTALTNLETCKAGFYDLGVQDYILPLMSNNVTKLLSNTLALNKVQYQEPSYKDGFPTWVRPGDRKLLQTSSPRPNVVVAKDGSGKYTTVSAAVNAIPKNNKGRYVIHVKAGVYNEQVEIKAKNIMLVGDGIGKTIITGSKSVGGGTTTFRSATVAVVGDGFIAQDITFRNTAGGKNHQAVALRSGSDLSVFYRCSFEGFQDTLYVHSDRQFYKQCNIYGTVDFIFGNAAAVFQNCNIFPRNPPNKVNTITAQGRTDPNQNTGISIHNSRVTAASDLKPVQNSVKTYLGRPWKQYSRAVFMKTSLDSLIHPSGWLEWSGNFALSTLYYGEYMNTGLGSSTRNRVKWQGFHVITSASEASKFTVSNFIAGNAWLPATKVPFTSTL* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0738 513 ProSitePatterns Pectinesterase signature 1. 230 249 IPR018040 -
Mtr4g0738 513 Gene3D - 199 513 IPR012334 -
Mtr4g0738 513 Pfam Pectinesterase 205 499 IPR000070 GO:0030599|GO:0042545
Mtr4g0738 513 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 173 IPR006501 GO:0004857
Mtr4g0738 513 PANTHER PECTINESTERASE 7 512 - -
Mtr4g0738 513 PANTHER PECTINESTERASE 7 512 - -
Mtr4g0738 513 Pfam Plant invertase/pectin methylesterase inhibitor 27 171 IPR006501 GO:0004857
Mtr4g0738 513 ProSitePatterns Pectinesterase signature 2. 347 356 IPR033131 -
Mtr4g0738 513 SUPERFAMILY Pectin lyase-like 200 512 IPR011050 -
Mtr4g0738 513 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 174 IPR035513 -
Mtr4g0738 513 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 174 IPR035513 -
Mtr4g0738 513 CDD PMEI-like_3 30 173 - -
Mtr4g0738 513 SMART PMEI_2 23 171 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0738 Mtr-Chr4 9257907 9260545 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0738 1 513 Carbohydrate Esterase AT2G45220 65.504 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0738 K01051 - gmx:100783428 884.019