Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0733 ATGGCCCCAAAACTCATTCTAGCATCATTAGTCATTTTCCTCTCACTCCTCTTTAAATCCACCCTAGCCAAACATAACTCTCAAACAATAAACTACATAGAGTCCTCTTGCAATGGTACCCTCTACCCTGATTTATGCATTCGTTGCCTAAACAAGTTTTCCAAATCAACCATAAATGGACCTCAACACTTAGCACATGTTGCCTTATTCGCGAGCCTCTCAAGAGCATTGCAAACAAGAGGGTACCTTTTGAATGCGGCCAAGGAACTCAAAGCTATTGATCACAACAACAAAAGGATGTATCTAACCGTGCAAGATTGTGTGAATCAAATGAATGATAGTGTTGATCAACTTAGTCAAGCCATCAAAGAACTAAAAAGGTTGAACAAATTTAACACAATCATCAATGATAAAGTGTTGTGGCACATAAGTAATGTTGAGACATGGGTTAGCACTGCCTTAACCGACGCTAGTAGTTGTGTGCAATCGTTCCCTGGTCATAGAATGAGCAAGAGGGTTGCGACGATTAAGGTGAAGGCGAAGAATGTTGCAGAAGTTACTAGTAACGCACTTGCTTTGTTTCAAAGTTATGCTACAAGGTATCGACAAGAAGCAGCTAGAACTTCCAAGAAGCCATGA 639 0.4053 MAPKLILASLVIFLSLLFKSTLAKHNSQTINYIESSCNGTLYPDLCIRCLNKFSKSTINGPQHLAHVALFASLSRALQTRGYLLNAAKELKAIDHNNKRMYLTVQDCVNQMNDSVDQLSQAIKELKRLNKFNTIINDKVLWHISNVETWVSTALTDASSCVQSFPGHRMSKRVATIKVKAKNVAEVTSNALALFQSYATRYRQEAARTSKKP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0733 212 Pfam Plant invertase/pectin methylesterase inhibitor 32 193 IPR006501 GO:0004857
Mtr4g0733 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 197 IPR035513 -
Mtr4g0733 212 SMART PMEI_2 28 193 IPR006501 GO:0004857
Mtr4g0733 212 Coils Coil 108 128 - -
Mtr4g0733 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 201 - -
Mtr4g0733 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 195 IPR035513 -
Mtr4g0733 212 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 196 IPR006501 GO:0004857
Mtr4g0733 212 CDD PMEI-like_3 35 199 - -
Mtr4g0733 212 PANTHER BNAANNG18590D PROTEIN 5 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0733 Mtr-Chr4 9211025 9212159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0733 4 196 Carbohydrate Esterase AT3G49220 25.118 5.19e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0733 - - mtr:MTR_4g025590 346.665