Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0729 ATGGCACAAAAATTCATTCTCACATCACTAGTCATTTTCCTCTCACTTTTCTTAGAGTCCTCCCTAGCCAAACATAACTCTCAAACAATAAACTACATTGAGTCCTCTTGCAACGGTACCCTCTACCCTACTCTATGTATTCGTTGCCTTAACAAATTTTCCAGTTCAACCATAAATGGACCTCAACACTTAGCTCAAGTTGCCTTATCCGTTAGCCTCTCAAGAGCATTGCAAACAAGAGGGTACCTTTTGAATGCGGCGAAGGAACTCAAAGCTATTGATCACAACAACAAGAGGATGTACCTAACCGTTCAAGATTGTGTGAATCAAATGAATGATAGTGTTGATCAACTTAGTCAAGCCATCAAAGAACTAAAAAGGTTGAACAAATTTAACACCATCATCAATGATAAAGTGTTGTGGCACATAAGTAATGTTGAGACATGGGTTAGCACTGCCTTAACCGACGCTAGTAGTTGTGTGCAATCGTTCCCTGGTCATAGAATGAGCAAGAGGGTTGCGACGATTAAGGTTAAGGCGAAGAATGTTGCAGAAGTAACTAGTAATGCACTTGCTTTGTTTCAAAGTTATGCTACAAGGTATCGACAAGCAGCCACGGCTAGAACTGTCAAGAAGCCATGA 642 0.4065 MAQKFILTSLVIFLSLFLESSLAKHNSQTINYIESSCNGTLYPTLCIRCLNKFSSSTINGPQHLAQVALSVSLSRALQTRGYLLNAAKELKAIDHNNKRMYLTVQDCVNQMNDSVDQLSQAIKELKRLNKFNTIINDKVLWHISNVETWVSTALTDASSCVQSFPGHRMSKRVATIKVKAKNVAEVTSNALALFQSYATRYRQAATARTVKKP* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0729 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 4 201 - -
Mtr4g0729 213 Pfam Plant invertase/pectin methylesterase inhibitor 32 193 IPR006501 GO:0004857
Mtr4g0729 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 195 IPR035513 -
Mtr4g0729 213 Coils Coil 108 128 - -
Mtr4g0729 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 197 IPR035513 -
Mtr4g0729 213 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 196 IPR006501 GO:0004857
Mtr4g0729 213 CDD PMEI-like_3 35 199 - -
Mtr4g0729 213 SMART PMEI_2 28 193 IPR006501 GO:0004857
Mtr4g0729 213 PANTHER BNAANNG18590D PROTEIN 4 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0729 Mtr-Chr4 9189921 9190710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0729 3 196 Carbohydrate Esterase AT3G49220 24.651 1.61e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0729 - - mtr:MTR_4g025590 337.035