Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0675 ATGCTTTCTCTCTGTAAGGATACTAAAGTTGCGTTTTTGTTGGCTGGAGTGGGAAACATAGACATACACAGAAAGACAAACTGCTTTGTTGTGAATTCTAGGTGCAAATTGTTGTTTTGCGAAGATAGTAGAAGATCATATATTTCGCGAGCGAGGTGTGCTGTTGCAGGCGTTGTAACAAGAGAGAGGATGGAAAAGAAAGAGACAATAAGAAAGGCTGAGGCATTGGTTGAGAAAGCAATGAAAGGGAATGACGCTTCTCATGATGCAGCACATGTTTGGAGGGTTCGTGACCTTGCTCTCTCCCTTGCTACCGAGGAAGGCCTCTCTTCTGATCCGCATTCCATGGAAATTGTAGAGCTTGCTGCACTGCTCCATGATATAGGTGACTACAAATACCTGAGGGATCCATCTGAAGAAAAAACTGTTGAAAATTTTCTAGAGGAAGAGGGAGTTGAGGAGAACAAGAAATCAAAGATTTTGAAGATCATCAAAGAAATGGGTTTTAAAGAGGAGGTGACAGGAAAAGGAACTACTGAATGGAGTCCAGAATTTGGTGTTGTCCAAGATGCTGATAGGCTTGATGCTATTGGTGCTATAGGAATTGCACGTTGCTTCACGTTTGGCGGGAGTAAGAAGAGGGCGCTGCATGATCCTGCTATTTTGCCAAGATCTGATCTGTCTAAGGAAAAATACATGAACAAAGAGGAACAAACTACAATTAATCATTTTCATGAGAAGCTTCTCAAACTTAAAGACATGATGAAAACCAAGGCTGGGCAAAGGAGGGCTGAGAGAAGGCACAAGTTCATGGTGGAGTTTGTCAAAGAGTTCTACGACGAATGGAACGGTTCAAGCTAA 861 0.4239 MLSLCKDTKVAFLLAGVGNIDIHRKTNCFVVNSRCKLLFCEDSRRSYISRARCAVAGVVTRERMEKKETIRKAEALVEKAMKGNDASHDAAHVWRVRDLALSLATEEGLSSDPHSMEIVELAALLHDIGDYKYLRDPSEEKTVENFLEEEGVEENKKSKILKIIKEMGFKEEVTGKGTTEWSPEFGVVQDADRLDAIGAIGIARCFTFGGSKKRALHDPAILPRSDLSKEKYMNKEEQTTINHFHEKLLKLKDMMKTKAGQRRAERRHKFMVEFVKEFYDEWNGSS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0675 286 CDD HDc 88 201 IPR003607 -
Mtr4g0675 286 Gene3D - 64 166 - -
Mtr4g0675 286 SMART hd_13 85 206 IPR003607 -
Mtr4g0675 286 Pfam HD domain 91 196 IPR006674 -
Mtr4g0675 286 SUPERFAMILY HD-domain/PDEase-like 64 284 - -
Mtr4g0675 286 Gene3D - 169 286 - -
Mtr4g0675 286 PANTHER SUPERFAMILY HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G03035)-RELATED 63 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0675 Mtr-Chr4 8453539 8457054 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0675 6 55 Primary Pumps ATPases(2) AT4G02620 44.000 3.96e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0675 K06950 - gmx:100500273 364.77