Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0674 ATGATTCGTCCTACTGGCATCACCCTCTTCACCCACCTTGCTCGTCGATCACTCTTTCGCGCCAAAGATTCCGTATATCAAGTAGTGTTTCAAAGGGGTTATAGGACATTCAATTCATCATCTAGTGTTATTGGTAGTAGTTATACAAGAAATGTTAGAGATGGTGTTAATTTGAAGAACTGGTTGCTATTGGGAGCGGCTAATTCATATTTTGGGGCTTCTAGATCAATTCATGGCTCGGCATCGTTGGCAAGGAGCTATTACGATGTTCTTGGTGTGAGTAAGGATGCAAGCTCTTCAGAAATAAAGAAAGCTTACTATGGGCTTGCAAAGAAGCTCCATCCAGATGCAAATAAAGATGATCCTGAGGCTGAAAAGAAGTTTCAAGAAGTTACATTGGCATATGAGGTTTTGAAGGATGGGGAAAAACGTCAACAGTATGATCAGGTTGGACATGATGCCTACGTAAACAACCAAAGCGGTGGTTTCGGAGGCAATGGTGGCTTTAATCCTTTCGAGCAGATGTTCCGTGGTGGCCATGATATTTTCAGCAGCTTTTTCCATCAAAAATTTGGCGGAGAGGATGTCAAGACTGTGGTTGAACTATCTTTCACGGAAGCTATCCAAGGGTGCACCAAAACTTTGTCATTTCAAACAGATGTGCTTTGTAATGCTTGTGGTGGGAGTGGTCTTCCTCCTGGTACAAAACCTGAAACTTGTAAGCGATGCAAAGGGTCAGGAGTGATGTTTGTACAAACTGGAATATTCAGAATGGAAAGTACTTGTGCTACATGCAAGGGAACTGGAAAAATTGTATCGAGTTTCTGCAAGTCTTGCCAAGGTGCCAAAGTTGTAAAAGGAACAAAGTCAGTCAAGTTGCATACTTATCCTGGGATAGACAACAATGAGACCCTAAAGGTGTATGGAGGTGGTGGAGCAGATCCTGATGGAAGTCGTTCCGGTGATCTATATGCTACTATCAAGGTTAGGGAAGATCCTGTTTTTCGCAGAGAAGGATTGGATGTTCACGTGGATGCTGTTTTAAGTTTCACTCAGGCGATTTTGGGGGCAACTATTGAGGTCCCATCTTTTACTGGAAGTGTAATGCTTAAGGTTCACCCAGGCACCCAACCTGGTCAGAAGGTGGTTATGAAAGGGAAAGGTATAATGAAAGGAATAAATACTTTCAAATATGGGGATCAGTATGTTCATTTTAATGTCAGCATTCCGACAAACCTGACAGAAAGACAGCGTGAATTGATCGAAGAGTTTGCCAAGGAAGAGCAAGAGGAATCAGATAAACGGAAAGCTGCTTCGGCTTCTAGTTAA 1329 0.4259 MIRPTGITLFTHLARRSLFRAKDSVYQVVFQRGYRTFNSSSSVIGSSYTRNVRDGVNLKNWLLLGAANSYFGASRSIHGSASLARSYYDVLGVSKDASSSEIKKAYYGLAKKLHPDANKDDPEAEKKFQEVTLAYEVLKDGEKRQQYDQVGHDAYVNNQSGGFGGNGGFNPFEQMFRGGHDIFSSFFHQKFGGEDVKTVVELSFTEAIQGCTKTLSFQTDVLCNACGGSGLPPGTKPETCKRCKGSGVMFVQTGIFRMESTCATCKGTGKIVSSFCKSCQGAKVVKGTKSVKLHTYPGIDNNETLKVYGGGGADPDGSRSGDLYATIKVREDPVFRREGLDVHVDAVLSFTQAILGATIEVPSFTGSVMLKVHPGTQPGQKVVMKGKGIMKGINTFKYGDQYVHFNVSIPTNLTERQRELIEEFAKEEQEESDKRKAASASS* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0674 442 Pfam DnaJ domain 87 148 IPR001623 -
Mtr4g0674 442 ProSiteProfiles Zinc finger CR-type profile. 210 288 IPR001305 GO:0031072|GO:0051082
Mtr4g0674 442 SUPERFAMILY HSP40/DnaJ peptide-binding domain 190 338 IPR008971 GO:0006457|GO:0051082
Mtr4g0674 442 SMART dnaj_3 85 143 IPR001623 -
Mtr4g0674 442 CDD DnaJ_zf 223 283 IPR001305 GO:0031072|GO:0051082
Mtr4g0674 442 ProSiteProfiles dnaJ domain profile. 86 151 IPR001623 -
Mtr4g0674 442 CDD DnaJ 87 140 IPR001623 -
Mtr4g0674 442 ProSitePatterns Nt-dnaJ domain signature. 128 147 IPR018253 -
Mtr4g0674 442 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 210 286 IPR036410 -
Mtr4g0674 442 Gene3D - 330 440 - -
Mtr4g0674 442 SUPERFAMILY Chaperone J-domain 85 189 IPR036869 -
Mtr4g0674 442 CDD DnaJ_C 194 413 - -
Mtr4g0674 442 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 28 440 - -
Mtr4g0674 442 Pfam DnaJ C terminal domain 197 410 IPR002939 -
Mtr4g0674 442 PRINTS DnaJ domain signature 88 106 IPR001623 -
Mtr4g0674 442 PRINTS DnaJ domain signature 106 121 IPR001623 -
Mtr4g0674 442 PRINTS DnaJ domain signature 123 143 IPR001623 -
Mtr4g0674 442 PRINTS DnaJ domain signature 143 162 IPR001623 -
Mtr4g0674 442 Hamap Chaperone protein DnaJ [dnaJ]. 83 437 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mtr4g0674 442 Pfam DnaJ central domain 223 283 IPR001305 GO:0031072|GO:0051082
Mtr4g0674 442 Gene3D - 196 328 - -
Mtr4g0674 442 Gene3D DnaJ domain 83 195 IPR036869 -
Mtr4g0674 442 Gene3D - 215 287 - -
Mtr4g0674 442 SUPERFAMILY HSP40/DnaJ peptide-binding domain 334 421 IPR008971 GO:0006457|GO:0051082
Mtr4g0674 442 PANTHER DNAJ-CLASS MOLECULAR CHAPERONE 28 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0674 Mtr-Chr4 8442419 8451391 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0674 80 148 C2H2 Transcription Factor Family AT1G74250 44.595 1.85e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0674 K03686 - gmx:100799735 688.723