Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0671 ATGTCTTCTTCTCCAAGCTCCTCATATGAAGTTCCTCATCCTCATCATCTTTGGATGTTCGATGTGTTTTTGAGTTACCATGACAAATACATTGGTAAATCTTTTGCATTGGATCTCTCTTCCGCTCTCACACAAGCTGGATATGCTGTTTATATCAACAATCACGATCTCACAAGCGGAGAACAGAGAAATTCAGCTGCAATCAAAGCGTGTAGAACTTCCATCATCATTTTCTCAAGTAAATTTGATGGTTCAACATGGTTTCTTGAAGAAATGGAGAAGATATTGGAGTGTCGTAGAACCATAAAGCAGGTATTTGTGCCTGTGTTCTATGATGTTGATCCCTCCGATGTACTAAAACAGAAGGGGGTGTTTGGAGAAGCTTTTGTAGATTGTATTGCACGAGGCATCTTGACAGAAGACAGCTCAATACGTTATAGAGACGCGCTCTTTGAAGCTGCCAATATTTCAGGATTTCGGATGATGGACACCAGGAGCCAATATAATGAAATCAATGACATAGTGCAAGGTTTCTGTCATTTGATAGAAGACCAAAAATCGTTATTCATTGCTGAACATCCGGTGGGAGTAGAAGCTCGGGTGAAAGATGTGATTCAACTATTGAACAGCGAACAAGCAGAAAATACCATGATTGTAGGGATATGGGGGATGGCTGGGGTTGGTAAAACAATAATTGCTAAAGCCACTTATAATCAAATGAGTTTCACTTTTGATTGCAAGAGCATTCTCAAGAATGTCAATGAAACTTGCAAATCGGGTGATGATGGGCTGGTTTCTTTCCAGCGACAACTTCTTTTAGACATCTGCAAAACAACAAAGATACATATAGATACAGTTGAATCAGGAAAGAAGATATTACAGAGAAGCCTTTGCCATAAGAAGGTATTTCTTGTACTTGACGGTGTGAATAAATTGGAACAGTTGAATGCTTTGTGTGGTGATCGTGATTGGTTTGGTCATGGAAGTAGAATAGTTATTACAACAAGTGATAAACATATACTTCGTAACCTTCAACTTGATCATGTGTATAGAATGAAATATATGGACAATACTGAATCTCTTAAGCTTTTTAGTTGGCATGCATTCAGAACTCCAAGTCCTAAAGAAAGTTACGCTGACCTTTGTAGAGATGTTGTTGAGTACTGTGGGGGGTTGCCGGTAGCTCTTGAAATCCTTGGGTCTTATTTGTTTGACAGATCTGTACAAGAGTGGAAGATTGCACTCCAGAAATTCAAAACCATTCTCCCCTATCAAATTGAGAAAAAATTGAGAAAAAATCTTGATGTCTTAGACCATGACAACCAAGATGTATTCCTTAAAATAGCTACTTTATTTATTGGGATGCACAAAGATGATGTAATTCAGACATTAAATTACTCTGGGCATTTCCCGGAAATTGCAATATCAATCCTTGAAGATAAAAGCCTTTTAACTATAGATGGCAACAACAGGATTGGAATGCATACTTTGTTACGAGCAATGGGAAGAGAAATCATAAGGCAACAGTCGATGGATATGGCTGCGACAAAGATGTACGACGTGTTCTTGAGTTTCAGAGGGGAAGACTGTCGAGCAAAATTCATTTCACATCTATATATCTCTCTTCAAAATTCCGGGCTTTATGTTTTCAAAGACGATGATGGGATTCAACGAGGAGATCAGATCTCAGTCGCACTAATCCAAGCTGTCGGACAGTCTAAAATTTCTATTGTTGTTCTGTCTAAAAACTTTGCTAATTCAAAATGGTGTATGACAGAGTTGGAGAGAATTGTGGAAATCAGTAGAACCAAGGGTATGGTGCTTGTGCCAGTGTTCTATGAGGTAGATCCCTCGGAAGTACGTCATCAGACAGGAGAGTTTGGAAAAGCTTTTGAATGTCTTCTATCTACAAAATCAGTGGATGAATACACAAAGAGAAATTGGAAAGCAGCACTCCATGAAGTTGGTAGCATAGCAGGGGTTGTCATCTTAAAATCCAGCGACGAAAGCGAGGATATCAAGAAAATAGTTGATCTTGTTACTCATTTGCTAGACAAGACAGAATTATTTGTTGCTGACCATCCGGTGGGACTAGAATCACGAGTACGAGATGTTATTCAACTACTGAGCAGACAAAAATCCAAAGATCCTCAACTACTAGGGATATGGGGCATGGGAGGGATTGGGAAAACAACCCTTGCTAAAGCCGTTTACAATAAAATTCGTCATGATTTTGATGCAAAGAGCTTCCTGTTCAATGTCAGAGATGTTTGGAAAGTAGACGATGACAAAGTTTCTTTACAGCAACGACTTCTTTTTGACATCTGCAAAACTACAAAGATAAAGATAGACTCAGTTGAATCAGGAAAAAAGATATTACAGGAAAGACTTTGTTCGAAAAAGATATTTCTTGTAATCGATGATGTGAATAAATTGGATCAATTGAATGCTTTGTGTGGAGATCGAAAATGGTTTGGTAAGGGAAGTAGAATACTCATCACAACAAGGGATGATGATTTACTCAGTAGGCTTGAAGTCGACCATGTATACAGAATGAAGGAAATGGATAGCAGTGAATCTCTAGAGCTTTTTAATTGGCATGCATTCAAGCAATCAACATCTAGGGAAGGTTTTACCAACATTTCCAGAGATGTTGTCAAGTACTCTGGAGGATTGCCGCTAGCTCTTCAAGTCATTGGGTCCTTTTTGTCGACTAAGAAAATAAAAGCAGAGTGGAAGGATGTACTGGAGAAACTCAAACTGATACCTAATAATGAAGTGTTGGAGAAGCTGAGAATAAGTTTTGATGGTTTAAGTGATGATGATGTGAAAGATATATTCCTTGATATTGCTTTTTTCTTTATTGGTATGGACCGGGAAGACGTAACTAAGATACTACAAGACTGTGGGCATTTTTCAGTAATTGGGATAAGTGTCCTCGTACAACAAAGTCTTGTAACTGTTGATAGGAAAAACAAGATCGGAATGCATGATTTGTTACGAGACATGGGCAGAGAGATCGTCCGCAAGATATCAAAAGATGCGGACAAGGAGCCTAGTAGATTATGGCATTATGAGGATGTGCATAAGTTGCCAATAGATACTAGTTCTTTAGCTGTCAAGGGACTGAGTTTAAAGATGTCAAGAATGGACTCAACAACTTATTTGGAAACCAAAGCATTTGAGAAGATGGACAAGCTAAGATTTCTTCAACTTGTTGGCATACAACTTAATGGAGATTACAAATATCTTTCAAGACATCTTAGGTGGCTTAGTTGGCATGGATTCCCTTTAAAATATATACCTGCCGACTTTCATCAAGATACTCTAGTTGCTGTTGTCTTGAAATATTCCAATCTGGAACGAGTGTGGAGAAAGTCTCAGTTTCTGGTGAAGCTGAAAATTCTTAATTTGAGTCATTCTCACAACTTGAGACATACCCCCGACTTTTCAAAATTGCCAAATCTTGAAAAGTTAATACTTAAGGATTGTCCCAGTTTGTCTTCGGTTTCTTCTAATATAGGACATCTCAAAAAGATTCTTTTAATAAATTTGAAAGATTGTACAGGCCTTCGAGAACTTCCAAGGAGCATATATAAGTTAGACTCGCTGAAAACACTCATTCTGTCTGGATGTACAAAAATTGACAAGTTAGAAGAGGATATAGAACAAATGAAATCTTTAACCACCTTGGTTGCGGATGACACTGCTATCACAAGAGTGCCCTTTGCAGTAGTAAGATCAAAAAGCATTGCATTTATTTCTCTATGTGGTTATAAAGGATCTGCACGTAGAGTGTTTCCTTCTATTATTCAGTCTTGGCTGTCTCCAACAAATAACATTCTATCCCTAGTTCAAACATCTGCAGGAACTTTATGTCGTGATTTCATCGATGAACAAAATAATAGTTTCTATTGTCTATCATCCATTTTAGAAGATCTTCAGAATACTCAACGTCTTTGGGTGAAATGTGATTCACAAGCTCAACTTAATCAAACTGTAGCAAGTATTTTATATAGCTTCAACACTCAAAATTGTGAGGGATTCTCAAATATTGAGACTTCAGCATCAAATTTTCGTCGCACTCAAGTTTGTATTTCCAGCTCAAAAAATTCAGTAACTTCCCTTTTGATTGAAATGGGAGTGAGCTGCGATGTCGCAAACATTCTTAGAGAAAATATTTTGCAGAAAATGCCTCCCACTGGGTCTGGTTTGCTCCCCGGTGACAACTATCCTGATTGGCTAACCTTCAATAGCAACAGTTCTTCTGTAACTTTCGAAGTACCTCAAGTGGACGGGCGTTCTTTGAAGACAATCATGTGCATTGCCTATTCTTCTTCTCTAGACAATACAACAACAGTTGGCTTTAAAGTTGTGTTGGTGATAAATTGCACCAAAAACACCATTCATGTCTACAAGATAGGCGCATTATTATCATCTTTCGACGAGGAGGAGTGGCAGAGAGTAATATCAAATATAGAACCTGGAAACGAAATTAAGGTGGTTGTTGTTTTTACAAATGAATTCATTGTGAAGAAAACAACAATTTATCTTGTCTATGATGAACCAATTGAGGAAAAGACGAACCACTGCCATGAGCCAGATGAGAATGGCATTGTGTCTAGTGGTGATGAAAATATATTTGGTAGACTCTTCTTCACTATTCCTTCCCTTGCTCGAGCTGTTCTGATATCACGGCCTTTCTGGTTCTGTTTGGCTGGTATTATGGTTTGGTCGTCTAGCTGCCGTTCTGACAAGCGAACAAGAAACAACCCTATTCTAAGGGATGTTGCATCGACGAGCTCTCAAGGATTCAATAATTTAGAATCTTTGGACAAAAACCCTTTGGATGGTGTACAAGATGTGAAAAGACGGGGTTAA 4881 0.3827 MSSSPSSSYEVPHPHHLWMFDVFLSYHDKYIGKSFALDLSSALTQAGYAVYINNHDLTSGEQRNSAAIKACRTSIIIFSSKFDGSTWFLEEMEKILECRRTIKQVFVPVFYDVDPSDVLKQKGVFGEAFVDCIARGILTEDSSIRYRDALFEAANISGFRMMDTRSQYNEINDIVQGFCHLIEDQKSLFIAEHPVGVEARVKDVIQLLNSEQAENTMIVGIWGMAGVGKTIIAKATYNQMSFTFDCKSILKNVNETCKSGDDGLVSFQRQLLLDICKTTKIHIDTVESGKKILQRSLCHKKVFLVLDGVNKLEQLNALCGDRDWFGHGSRIVITTSDKHILRNLQLDHVYRMKYMDNTESLKLFSWHAFRTPSPKESYADLCRDVVEYCGGLPVALEILGSYLFDRSVQEWKIALQKFKTILPYQIEKKLRKNLDVLDHDNQDVFLKIATLFIGMHKDDVIQTLNYSGHFPEIAISILEDKSLLTIDGNNRIGMHTLLRAMGREIIRQQSMDMAATKMYDVFLSFRGEDCRAKFISHLYISLQNSGLYVFKDDDGIQRGDQISVALIQAVGQSKISIVVLSKNFANSKWCMTELERIVEISRTKGMVLVPVFYEVDPSEVRHQTGEFGKAFECLLSTKSVDEYTKRNWKAALHEVGSIAGVVILKSSDESEDIKKIVDLVTHLLDKTELFVADHPVGLESRVRDVIQLLSRQKSKDPQLLGIWGMGGIGKTTLAKAVYNKIRHDFDAKSFLFNVRDVWKVDDDKVSLQQRLLFDICKTTKIKIDSVESGKKILQERLCSKKIFLVIDDVNKLDQLNALCGDRKWFGKGSRILITTRDDDLLSRLEVDHVYRMKEMDSSESLELFNWHAFKQSTSREGFTNISRDVVKYSGGLPLALQVIGSFLSTKKIKAEWKDVLEKLKLIPNNEVLEKLRISFDGLSDDDVKDIFLDIAFFFIGMDREDVTKILQDCGHFSVIGISVLVQQSLVTVDRKNKIGMHDLLRDMGREIVRKISKDADKEPSRLWHYEDVHKLPIDTSSLAVKGLSLKMSRMDSTTYLETKAFEKMDKLRFLQLVGIQLNGDYKYLSRHLRWLSWHGFPLKYIPADFHQDTLVAVVLKYSNLERVWRKSQFLVKLKILNLSHSHNLRHTPDFSKLPNLEKLILKDCPSLSSVSSNIGHLKKILLINLKDCTGLRELPRSIYKLDSLKTLILSGCTKIDKLEEDIEQMKSLTTLVADDTAITRVPFAVVRSKSIAFISLCGYKGSARRVFPSIIQSWLSPTNNILSLVQTSAGTLCRDFIDEQNNSFYCLSSILEDLQNTQRLWVKCDSQAQLNQTVASILYSFNTQNCEGFSNIETSASNFRRTQVCISSSKNSVTSLLIEMGVSCDVANILRENILQKMPPTGSGLLPGDNYPDWLTFNSNSSSVTFEVPQVDGRSLKTIMCIAYSSSLDNTTTVGFKVVLVINCTKNTIHVYKIGALLSSFDEEEWQRVISNIEPGNEIKVVVVFTNEFIVKKTTIYLVYDEPIEEKTNHCHEPDENGIVSSGDENIFGRLFFTIPSLARAVLISRPFWFCLAGIMVWSSSCRSDKRTRNNPILRDVASTSSQGFNNLESLDKNPLDGVQDVKRRG* 1627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0671 1626 Gene3D - 15 186 IPR035897 -
Mtr4g0671 1626 PRINTS Disease resistance protein signature 719 734 - -
Mtr4g0671 1626 PRINTS Disease resistance protein signature 796 810 - -
Mtr4g0671 1626 PRINTS Disease resistance protein signature 889 903 - -
Mtr4g0671 1626 PRINTS Disease resistance protein signature 1199 1215 - -
Mtr4g0671 1626 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 510 IPR044974 GO:0006952
Mtr4g0671 1626 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 527 1510 IPR044974 GO:0006952
Mtr4g0671 1626 Gene3D - 355 438 IPR042197 -
Mtr4g0671 1626 Gene3D - 855 939 IPR042197 -
Mtr4g0671 1626 SUPERFAMILY L domain-like 996 1274 - -
Mtr4g0671 1626 ProSiteProfiles TIR domain profile. 517 684 IPR000157 GO:0007165
Mtr4g0671 1626 Gene3D Ribonuclease Inhibitor 1033 1240 IPR032675 -
Mtr4g0671 1626 SMART till_3 518 658 IPR000157 GO:0007165
Mtr4g0671 1626 SMART till_3 19 156 IPR000157 GO:0007165
Mtr4g0671 1626 ProSiteProfiles TIR domain profile. 18 186 IPR000157 GO:0007165
Mtr4g0671 1626 CDD AAA 696 848 - -
Mtr4g0671 1626 Gene3D - 516 681 IPR035897 -
Mtr4g0671 1626 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 158 IPR035897 -
Mtr4g0671 1626 Pfam TIR domain 20 149 IPR000157 GO:0007165
Mtr4g0671 1626 Pfam TIR domain 519 680 IPR000157 GO:0007165
Mtr4g0671 1626 SUPERFAMILY Toll/Interleukin receptor TIR domain 516 660 IPR035897 -
Mtr4g0671 1626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 681 950 IPR027417 -
Mtr4g0671 1626 SUPERFAMILY "Winged helix" DNA-binding domain 426 510 IPR036390 -
Mtr4g0671 1626 Pfam NB-ARC domain 699 920 IPR002182 GO:0043531
Mtr4g0671 1626 Pfam NB-ARC domain 198 437 IPR002182 GO:0043531
Mtr4g0671 1626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 447 IPR027417 -
Mtr4g0671 1626 SMART AAA_5 716 859 IPR003593 -
Mtr4g0671 1626 SMART AAA_5 215 359 IPR003593 -
Mtr4g0671 1626 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 29 510 - -
Mtr4g0671 1626 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 527 1510 - -
Mtr4g0671 1626 MobiDBLite consensus disorder prediction 1605 1626 - -
Mtr4g0671 1626 Gene3D - 187 349 IPR027417 -
Mtr4g0671 1626 Gene3D - 682 849 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0671 Mtr-Chr4 8402790 8411893 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0671 20 541 WRKY Transcription Factor Family AT4G12020 27.186 5.54e-44 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0671 - - mtr:MTR_7g088950 1848.94