Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0667 ATGGTTGTGCTATGTGAAAACTATGGATTTTCCACTTCATGCCTTGATGAACTGGCCAAGATCACTCAGTATATTGACAACAAAAAAAGTAATGTAGCTGCAATTTTCTATAAAGTGGAACCATCATATATACGGAATCAAAAACTTTCGTATGAAGTAGCTATGGATGAACATGAAAAGAGATATGGAAAAGAGTCGGAGAAGATTAGAACATGGAGAAATGCTTTGACTAGAGTTTGTGATCTAAGTGGAGTGCATTACAAAGATAGTGTGTATGAATCTGAGATCATAGAGAAGATAGTTAAATACATATCGACTAAAGTAGCTCCTGCACCTGTGCAATTGAAACACATGGTTGAACTTGATACTCGTTTTAAAGAACTGAAATCAGTTTTACATGTTGAGTGTAATGATACTGTTCGAATGTTGGGAATTTATGGAGCTGGTGGAATAGGAAAAACCACATTTGCAGCTTATTTATATGACAAGATCAGACATCATTTTGAATCGTCAACTTTTCTTCTTAATGTCAGAGAAAAATCAGACAAAGGCATCAAAGGCCTAGAAGATCTCCAAAAGACACTTCTATGTCAGATGGGTGAAGATATTGGAACAATGACTTGCAAGAGAAGAGTTCTTCTGGTTTTGGATGATATTGATAGCATAGAAAAATTGAACTTATTGGCTGGAGGACGTGATTGGTTTGGTTCTGGTAGTAGGATCATAATAACAACAAGGGATGAAACTGTGTTAGATTATCATGATGCTGAAATTGAGAAATTTAAAATGGAGGCACTAAATGATTGTGACTCACTCGAACTCTTTTGTTGGAATGCCTTTGGTGTTAACAGACCTACCAGAAAAATTTGA 870 0.3563 MVVLCENYGFSTSCLDELAKITQYIDNKKSNVAAIFYKVEPSYIRNQKLSYEVAMDEHEKRYGKESEKIRTWRNALTRVCDLSGVHYKDSVYESEIIEKIVKYISTKVAPAPVQLKHMVELDTRFKELKSVLHVECNDTVRMLGIYGAGGIGKTTFAAYLYDKIRHHFESSTFLLNVREKSDKGIKGLEDLQKTLLCQMGEDIGTMTCKRRVLLVLDDIDSIEKLNLLAGGRDWFGSGSRIIITTRDETVLDYHDAEIEKFKMEALNDCDSLELFCWNAFGVNRPTRKI* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0667 289 Pfam NB-ARC domain 125 280 IPR002182 GO:0043531
Mtr4g0667 289 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 84 IPR035897 -
Mtr4g0667 289 PRINTS Disease resistance protein signature 142 157 - -
Mtr4g0667 289 PRINTS Disease resistance protein signature 206 220 - -
Mtr4g0667 289 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 284 - -
Mtr4g0667 289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 285 IPR027417 -
Mtr4g0667 289 Gene3D - 108 264 IPR027417 -
Mtr4g0667 289 ProSiteProfiles TIR domain profile. 1 108 IPR000157 GO:0007165
Mtr4g0667 289 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 284 IPR044974 GO:0006952
Mtr4g0667 289 Gene3D - 1 107 IPR035897 -
Mtr4g0667 289 Pfam TIR domain 2 114 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0667 Mtr-Chr4 8347026 8348149 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0667 11 251 WRKY Transcription Factor Family AT4G12020 28.516 3.54e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0667 - - mtr:MTR_4g023210 585.104