LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr4g0658	ATGGCAAATCACTACGAAGATTTCACTCACGATGTTTTTCTGAGTTTCAGAGGCGGAACACGCTACTCTTTCACCGATCATCTCTACCGTTCACTTCTCCGTCAAGGAATCAACGTTTTCAGAGACGACCAAAACCTCAAGATCGGCCATGAAATCGGACCTTCACTCCTACAAGCAATCGAAGCTTCTAGAATCTCAATCGTTGTGCTGTGTAAAGAATATGCTTCTTCAACTTGGTGCCTTGATGAACTTGTTAAGATCGTTGACTGTTATGAAAATAATGGAAAATCGGTTTTCGTTATATTTTATAAGATGGAACCTAGCGATGTTAGGTATCAGAAAAATAGTTATGAAGATGCTATTAGGAAACATGAAAAGAGATTTGGAAGGGAATCGGAGAAGGTGAAAGCATGGAAGTTGGCTTTGAATCGAGTTTGTGCTCTCAGTGGATTACATTGCAAGGACGATGTCTATGAATCTGAGTTTATTGAAAAGATTGTCAGAGATATCTCTACTAAACTACCGACCGTGCCTTTACAAATCAAACACCTAGTCGGCCTCAATACTCGTTTCAAACAGGTGAAATCTATTATTGATATCAACTCTAGTGAACGTATTTGCATGTTGGGAATTTACGGAGCTGGCGGAATAGGCAAAACCCAGTTTGCCTTGCATATATATAACAAGATCAGACATCAATTTGAAGCTGCGAGTTTTCTTGCTAATGTTAGAGAAAAATCAAATGAAAGCATTGGTGGTCTGGAAAATCTCCAAAGGACACTTTTGAATGAGATAGGTGAGGCGACACAAGTGTTCGGAAGCTCATTTAGAGGAAGCTCTGAAATAAAACACAGGCTTTCTCACAAAAGAGTTCTTCTGATACTGGATGATGTTGATTCTGTAAAACAATTGGAATCACTTGCTGGAGGACATGATTGGTTTAATTCTGGTAGCATTATCATTATAACTACAAGAGATATAGATATTCTACATAAGCATGATGTTAAAATTAAACCATATAAACTCGAAGAGCTAAATCATCATGAATCCACTGAACTCTTTTGTTGGTATGCCTTTAACATGAGCAGACCTGTAGAAAACTTTGAAAAAATATCTTCTCATGCAATAAGTTATGCAAAGGGTATTCCATTGGCTTTAAGAGTAATAGGATCCAACTTGAAAGGTAAAAGCATTGAAGAATGGGATATTGAACTTCAGAAATATAGAAAGGTCCCAGATGCTGAGATTCAAGGTGTAATGGAAATCAGCTACAAAGGCCTATCTGACTTGGACCAGAAAATTTTTCTAGACATCGCGTGTTTCTTCAAAGGGGAAAGATGGGATTATGCTAAAAGGATACTAGACGCTTGTGATTTCTACCCAGTTATACGAGCGTTTAATAGTAAATGTCTCATAACTGTTGATGAAAATGGTTTGCTACAAATGCATGATCTAATACAAGACATGGGTAGAGAGATTGTACGGAAAGAATCAACATCAAACCCTGGTGAACGTAGCAGATTGTGGTCTCATAAAGATGTTCTTGATGTACTGAAAGGAAATTTGGGAAGTACTAAAGTAGAAGGAATGATGCTTCATCCCCCAAAACAAGAAAAAGTAGATTATTGGGCTTATTCTGCCTTTAAGAAGATGAAAAACCTCAGAATTTTGATTGTAAGGAATACATTATTTTCATCAGGACCTAGCTATTTGCCAAATAATTTACGGCTACTCGATTGGAAGTGCTACCCTTCAAAGGATTTCCCACTAAATTTTTATCCATACAGAATTGTTGATTTCAAGTTACCTCATAGTTCTATGATATTGAAAAAGCCCTTTCAGATTTTTGAGGATTTAACGCTCATCAATCTCTCCCATAGTCAATCCATAACTCAAGTTCCTGATTTGTCTGGAGCTAAAAACTTAAGAGTGTTTACACTTGATAAATGCCATAAATTGGTAAGGTTTGATATATCCATTGGATTTATGCCTAATATGGTGTATTTAAGTGCTTCTGAGTGCACTGAGCTTAAAAGTTTTGTGCCAAAAATATATTTACCCTCCCTTCAAGTGCTTTCATTCAATTACTGCAAAAAATTTGAATACTTCCCTCAAGTAATGCAGAAGATGGATAAGCCATTAAAGATTCACATGATAAGTACTGCCATTAAGGAGTTTCCAAAGTCTATTCTTAACCTTACAGGCCTTGAGTATATAGACATGTCAATTTGTAAAGGGCTTAAAGATCTTTCAAGTAGCTTCTTATTGCTTCCAAGACTGGTAACTTTGAAAATTGATGGCTGCTCTCAACTTGGACAATCATTTCAACGGTTCAACGAACGCCATTCAGTGGCAAACAAATATTCAAATTTAGAAGCACTTCATTTTAGCGAGGCTAATCTATCAGATGAAGATGTTAATGCCATTATTGAAAATTTTCCAAAACTGGCATACTTGAAAGTTTCACACAATGGTTTTGTATCCCTCCCAAATTGCATCAGAGGATCTATGCACTTGAAAAGTCTTGATGTGAGTTTTTGCAGAAACCTTACGGAAGTTTCAGAACTTCCATTAAGTATTCAGAAGATCGATGCAAGACACTGTAAATCCTTAACTTTAGATGCATCAAGTGTGCTTTGGTCCAAGGTTTCGCAAGAGATCCAAAGAATACAAGTAGTGATGCCGATGCCAAAAAGGGATATTCCAGAATGGTTTGACTGCGTTAGCAGTCAAGAGATTCCGCTTTTATGGGCTCGCCATAAGTTTCCCATCGTTGCTATAGCATTAGTGTTCCAGGCAGTAAAAAAGACGGACGATGTTTCTAAATTCTTTGATGATATAAATTTGTTAATTGGAGTCAAAGGCTGGCACACTGTTGGCCTCCATTTATTTATTGATGGCCAAGAATTTTGTGGCATGGGTTGTCAATATTTCATTGTTGGGGAAGATCATGTGCTATTGTGTGATCTACGGGTTTTGTTCAGTGATGAAGAGTGGCAGGACCTTGATGCAAATCTTGGAGATGACTGGAAGGCCATTCAGGTTCAATATGATTCAGACTTGGTTCTAATTAATTGGGGAGTTTATGTGTACAAGCAAGAAACAAGCATGGATGATATTCAATTCATACCTCCAAATCACAATTCATTTTCGTACATGGCATCGTCGTGTCTAGTTCCAAAGGGATCTCCAGGGAAGCAAATGAAACGTGTGTTGGAAAGTTTCAATCCAAGAGACATGTTTCACGAGCATTTGCCTGTATTTGAATCAGAAGCAGGTCCAGTCGGATCTTTAAAATTGCTTTTGCGGTCTTTGAGGAATGCCAAGGCTGAAGTTGTAGAAGAGACTTCTTCCTCTTCCTATGGGGTAAGTCTAAAGCAAGATCATGAAGATTCTGTAGAGGATGTGATTCAAGTGTTAGAGATGTTCAAAGAGAATATATCAGAATATTTTGCCGATTCATCTCCTGAAGATCTTCAAATTGCAACCGGATTTTTGGAAAGAATATTGAGGGCACGGGTAGAATTAATGAAGGAAAATGGCTTGGACATTGGTATGCCTATTATACTAGGGTATACTGATGCATCAGGAGCTACACATCGACGCTTTTGGGGAATCATGGAGATAAAATTGAGAGATCCATTTTACAAACCAGTGTTGAAGAGGCAAAACCAACTTGCCTGGGGACTTGGAACGTCTGAGCTGAGCGTAATCATTGTTGAATTGAAATGCCAGCCTGTAGGTACAGAGGAAGCTTCAAGCTCTAGCCTTGAAGAATCCTTGGAGGAAGGAAACTACAATCCTGATTTGGAAGAGTTAATGAGGAGGATAGAGCAAGATGCTATGAGCTTGAATAAATCTTATGGGAAAATGAAGGCATCTATTGTTCAAACTGATGAGTCCATTTCAGAAAAATATCTATTGGAAACATTAATCTTCAGAAGACTAATGATTTTAGGAAAATTGACAATGTTTGGATCAGTGACCAAGTTCAAGATCACACCTTATGGGAAGATAAGGGCAGAGGACGACCCTTTCCGCATACTGAGGATAAGTTTCTGGGTTTCGACCTTGGTGATTCAAGCTCTAATTATATGGTCATTTTATTTCTTTGTACTTGTGTGCCTTTTTTTTGTACTTGTGTGCCTTTATTTGCATAGGATACCAATAATAAGGAAGATATTAGGGTGGGGTTGGTTGCTTGTCAAGCATATTTTTTTTGCTTGTAAAAACTTATGCAGGGGAACTGGCGAGATTATTAGGAGAATAAAAGAGAAGGAATTGTAG	4287	0.3779	MANHYEDFTHDVFLSFRGGTRYSFTDHLYRSLLRQGINVFRDDQNLKIGHEIGPSLLQAIEASRISIVVLCKEYASSTWCLDELVKIVDCYENNGKSVFVIFYKMEPSDVRYQKNSYEDAIRKHEKRFGRESEKVKAWKLALNRVCALSGLHCKDDVYESEFIEKIVRDISTKLPTVPLQIKHLVGLNTRFKQVKSIIDINSSERICMLGIYGAGGIGKTQFALHIYNKIRHQFEAASFLANVREKSNESIGGLENLQRTLLNEIGEATQVFGSSFRGSSEIKHRLSHKRVLLILDDVDSVKQLESLAGGHDWFNSGSIIIITTRDIDILHKHDVKIKPYKLEELNHHESTELFCWYAFNMSRPVENFEKISSHAISYAKGIPLALRVIGSNLKGKSIEEWDIELQKYRKVPDAEIQGVMEISYKGLSDLDQKIFLDIACFFKGERWDYAKRILDACDFYPVIRAFNSKCLITVDENGLLQMHDLIQDMGREIVRKESTSNPGERSRLWSHKDVLDVLKGNLGSTKVEGMMLHPPKQEKVDYWAYSAFKKMKNLRILIVRNTLFSSGPSYLPNNLRLLDWKCYPSKDFPLNFYPYRIVDFKLPHSSMILKKPFQIFEDLTLINLSHSQSITQVPDLSGAKNLRVFTLDKCHKLVRFDISIGFMPNMVYLSASECTELKSFVPKIYLPSLQVLSFNYCKKFEYFPQVMQKMDKPLKIHMISTAIKEFPKSILNLTGLEYIDMSICKGLKDLSSSFLLLPRLVTLKIDGCSQLGQSFQRFNERHSVANKYSNLEALHFSEANLSDEDVNAIIENFPKLAYLKVSHNGFVSLPNCIRGSMHLKSLDVSFCRNLTEVSELPLSIQKIDARHCKSLTLDASSVLWSKVSQEIQRIQVVMPMPKRDIPEWFDCVSSQEIPLLWARHKFPIVAIALVFQAVKKTDDVSKFFDDINLLIGVKGWHTVGLHLFIDGQEFCGMGCQYFIVGEDHVLLCDLRVLFSDEEWQDLDANLGDDWKAIQVQYDSDLVLINWGVYVYKQETSMDDIQFIPPNHNSFSYMASSCLVPKGSPGKQMKRVLESFNPRDMFHEHLPVFESEAGPVGSLKLLLRSLRNAKAEVVEETSSSSYGVSLKQDHEDSVEDVIQVLEMFKENISEYFADSSPEDLQIATGFLERILRARVELMKENGLDIGMPIILGYTDASGATHRRFWGIMEIKLRDPFYKPVLKRQNQLAWGLGTSELSVIIVELKCQPVGTEEASSSSLEESLEEGNYNPDLEELMRRIEQDAMSLNKSYGKMKASIVQTDESISEKYLLETLIFRRLMILGKLTMFGSVTKFKITPYGKIRAEDDPFRILRISFWVSTLVIQALIIWSFYFFVLVCLFFVLVCLYLHRIPIIRKILGWGWLLVKHIFFACKNLCRGTGEIIRRIKEKEL*	1429

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr4g0658	1428	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	175	438	IPR027417	-
	Mtr4g0658	1428	Pfam	TIR domain	10	179	IPR000157	GO:0007165
	Mtr4g0658	1428	Gene3D	Ribonuclease Inhibitor	542	716	IPR032675	-
	Mtr4g0658	1428	Gene3D	Ribonuclease Inhibitor	717	882	IPR032675	-
	Mtr4g0658	1428	Pfam	NB-ARC domain	201	402	IPR002182	GO:0043531
	Mtr4g0658	1428	Gene3D	-	175	339	IPR027417	-
	Mtr4g0658	1428	SMART	till_3	9	148	IPR000157	GO:0007165
	Mtr4g0658	1428	ProSiteProfiles	TIR domain profile.	8	174	IPR000157	GO:0007165
	Mtr4g0658	1428	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	14	1126	IPR044974	GO:0006952
	Mtr4g0658	1428	Gene3D	-	344	428	IPR042197	-
	Mtr4g0658	1428	PRINTS	Disease resistance protein signature	208	223	-	-
	Mtr4g0658	1428	PRINTS	Disease resistance protein signature	285	299	-	-
	Mtr4g0658	1428	PRINTS	Disease resistance protein signature	379	393	-	-
	Mtr4g0658	1428	PRINTS	Disease resistance protein signature	731	747	-	-
	Mtr4g0658	1428	SUPERFAMILY	L domain-like	540	905	-	-
	Mtr4g0658	1428	Gene3D	-	8	174	IPR035897	-
	Mtr4g0658	1428	PANTHER	RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED	14	1126	-	-
	Mtr4g0658	1428	SUPERFAMILY	"Winged helix" DNA-binding domain	415	519	IPR036390	-
	Mtr4g0658	1428	SUPERFAMILY	Toll/Interleukin receptor TIR domain	6	150	IPR035897	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr4g0658	Mtr-Chr4	8271165	8276098	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr4g0658	24	771	WRKY Transcription Factor Family	AT4G12020	30.401	1.52e-80	291

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr4g0658	-		-	mtr:MTR_4g023040	2619.34