Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0648 ATGGGTGCATTCCAAGTACTCTCCACCAATACAATCAAGGCATTGAAATCAAGTAATCATAAAATCGATTTAACTCCATGGGATCTCCAATTTCTACTTTATCCAACCAATAAAAAAGGCCTTCTTTATCACCATCCTTTAGCATCAGACCAAATTCAACGGCTGACACACTCTTTATCCTCAGCCCTTTCCTTTTTCCAACCTCTTGCCGGTCGTCTCAAAATTACAGAACACGAAGACAGCATTGTCTCGTGTTCTGTAACATGCAATAATGCAGGTGTAAACTTTATACATGCTGCAGCCAAGGATACTTGTGTTGCTGACATCCTAAAACCCACATATGTTCCTTCGGTTGTTCGTTCATTTTTTCCTTTCAATGACGTTAGAAACTACGAAGGCACATCAAAACCATTGTTGGCTGTTCAAGTCACGGAGCTAGTTGACGGCATCTTCATTGGCTTTAATTTCAACCATGTCGTAGCTGACGGACAGTCCACGTGGCATTTCATCAATTCGTGGGCTGAAATGTCACGTGGTTGTCATCATCAAATATCTAACTCCCCAACGCTGGAGCGTTGGTTTCCAAATGGAATTCAACGACCTATACGATTTCCTTTAACTATAGAGCCACAAAAGAATCACTCTGATGGGTTAAGTTTTTCGTCTTCTGATGACGAAAAACTCTTTCTATCAGAGAGGATATTTCACTTTACAAAGAAGAAAATCATGCAACTGAAATCGAAAGTCAATGCAGAGATTGATACCAAAAAAATATCTTCTCTACAAGCGCTTTTAACTCATCTTTGGTGTTCAGTGATTCGTTCCAAACATCTTGATCCACAAGAAGATGCGCTTAATACGTTCATAATAGGAGTTAGACCAAGACTTGTTCCACCATTGCCGGAAGATTATTTTGGAAACGCGATTATAGGTTGCGGGTTTAAAATGAAAGTTGGGGAGTTGTTGGAGGAAGGTGGGATTGGTAAAGGTGCTTTGTTGATGAATAAGTTAATTGCTTTGCACTCGAATGAAAAATTAAAGAATGATTATGAGTCATGGTTGAGAAATCCAAACTTTATTAGGCTTGATAGCTTGAGCACTAAGAATTTTTTGGCCATTAGCAGTTCTCCAAAGTTTGATGTTTATGGTAATGATTTTGGATGGGGAAAGCCTGTGGCAGTTCGTAGTGGAAATAAAACAAATGGAATGGTTTGTGCCTTTGCTGGAATAGAAGAAGCTAGCATTGACCTTCAAGTGTGTCTTCCTTACAAGATTTTGGAGGCAATGGGAAATGATCCTGAGTTCATGGATATGGTCAACTAA 1323 0.3938 MGAFQVLSTNTIKALKSSNHKIDLTPWDLQFLLYPTNKKGLLYHHPLASDQIQRLTHSLSSALSFFQPLAGRLKITEHEDSIVSCSVTCNNAGVNFIHAAAKDTCVADILKPTYVPSVVRSFFPFNDVRNYEGTSKPLLAVQVTELVDGIFIGFNFNHVVADGQSTWHFINSWAEMSRGCHHQISNSPTLERWFPNGIQRPIRFPLTIEPQKNHSDGLSFSSSDDEKLFLSERIFHFTKKKIMQLKSKVNAEIDTKKISSLQALLTHLWCSVIRSKHLDPQEDALNTFIIGVRPRLVPPLPEDYFGNAIIGCGFKMKVGELLEEGGIGKGALLMNKLIALHSNEKLKNDYESWLRNPNFIRLDSLSTKNFLAISSSPKFDVYGNDFGWGKPVAVRSGNKTNGMVCAFAGIEEASIDLQVCLPYKILEAMGNDPEFMDMVN* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0648 440 Pfam Transferase family 8 436 - -
Mtr4g0648 440 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 438 - -
Mtr4g0648 440 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 5 438 - -
Mtr4g0648 440 Gene3D - 230 431 IPR023213 -
Mtr4g0648 440 Gene3D - 4 200 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0648 Mtr-Chr4 8175018 8176682 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0648 53 398 Monolignol Biosynthesis Gene Families AT5G48930 29.722 2.03e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0648 - - mtr:MTR_4g022760 556.984