Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0646 ATGGGAGCTATTCGAGTTCTCTCCACCGATACAATCAAGGCACCAAAATCAAGTGAGCAAACAATCCATTTGACTCCATGGGATCTCCGGTATCTACTTGTTTTAACCAACAAAAAGGGCCTTCTTTATCGCCATCCGGTTGTAGCTAACCAAATCCAACGGCTGAGACACTCTCTGTCCTCAGCCCTTGCCTTTTTCCAACCTCTTGCCGGCCGTCTCAAAATAACGGAACACAGAGACAACACTGTTTCGTGTTCCGTTATATGCAACAATGCAGGTGTACTCTTTGTCCATGCCGCAGCAGAGAATACTTGTGTTGCAGACATCCTAGAACCCACCTACGTACCTCCAATTGTTGATTTATTATTTGCTTTATCCGAAGTAAGAAGCTATGAAGGCACATCAAAACCATTGTTGGCAGTTCAAGTAACGGAGCTAGTTGACGGTATTTTCATTGGTTGCTCATTTAACCATGTTGTCGTTGACGGAAAGTCCGTGTGGCATTTCATCAATTCCTGGGCTGAAATCTCACGTAGTTGTTGTCATCATCAAATATCTAAACCCCCAACACTAGAGCGTTGGTTTCCAAATGGTGTTCAACGGCCTATACGATTTCCTTTCACTTTGGAGCAACAAAATGATCACTCTGATAGGTTGAGTTTTTCATCGTTTAATGAGGAAAAATATTGTTTATCAAATAGGTTATTTCATTTCACAAAGGAGAAAATCCTACAATTGAAATCGAAAATCAACGAAGAGATCGGCACCACCAAAATATCTTCTCTACAAGCACTTTTAACTCACGTTTGGTGCTATGTGACCCGTTTCAAACAATTTGACCCACAAGAAGAAGTATTTAATAGAGTCGTGATAGGAGTTCGACCAAGGTTAGTTCCACCGTTACCAGAAGATTATTTTGGAAATGCACTTATAAGTTGTATGGTTAAAATGAAAGCTGGGGAATTGTTGGAGGAAGGTGGACTTTGTAAAGGTGCTTTGGAGATGAACAAGTTAATTGCTTCACACACTGATGAGAAGTTGAAGAATCATTACGAGTCTTGGTTAAGAAATCCAAGCTTTTTTAGGCTTGCTAAGAACATGGTAAAAAATAATTTCATATCCATTAGTAGTTCTCCATGGTTTGATGTTTATGGTAATGATTTTGGATGGGGAAAGCCTCTGGCAGTTCGTAGTGGATATAAAATAAATGGACTTATTACGGTATTTGCCGGAATAGAAGAAGGTAGTATAGACCTTCAAGTTTGTCTTCCTCGTGAGATTTTGGAGGGAATGGGAAATGACCCCAATTTCATGGATGTTGTGTCCAACTAA 1332 0.4009 MGAIRVLSTDTIKAPKSSEQTIHLTPWDLRYLLVLTNKKGLLYRHPVVANQIQRLRHSLSSALAFFQPLAGRLKITEHRDNTVSCSVICNNAGVLFVHAAAENTCVADILEPTYVPPIVDLLFALSEVRSYEGTSKPLLAVQVTELVDGIFIGCSFNHVVVDGKSVWHFINSWAEISRSCCHHQISKPPTLERWFPNGVQRPIRFPFTLEQQNDHSDRLSFSSFNEEKYCLSNRLFHFTKEKILQLKSKINEEIGTTKISSLQALLTHVWCYVTRFKQFDPQEEVFNRVVIGVRPRLVPPLPEDYFGNALISCMVKMKAGELLEEGGLCKGALEMNKLIASHTDEKLKNHYESWLRNPSFFRLAKNMVKNNFISISSSPWFDVYGNDFGWGKPLAVRSGYKINGLITVFAGIEEGSIDLQVCLPREILEGMGNDPNFMDVVSN* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0646 443 Gene3D - 211 432 IPR023213 -
Mtr4g0646 443 Gene3D - 4 204 IPR023213 -
Mtr4g0646 443 Pfam Transferase family 6 437 - -
Mtr4g0646 443 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 441 - -
Mtr4g0646 443 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0646 Mtr-Chr4 8156421 8158371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0646 53 429 Monolignol Biosynthesis Gene Families AT5G48930 27.415 4.11e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0646 - - mtr:MTR_4g022760 691.804