Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0627 ATGGAAGAGATTCAATTTATCTCAACTACTACAATCAAAGCAACAAATCATGGTGATGATGACAACTCAAGTGACAAAATTATCCATTTATCTCCATGGGATCTCAAATTTCTCAAATTGGCACCAATCCAAAGAGGTCTTCTTTTCCATAAACCCAAAACAAACCAAATTGACCATCTTAAAAAAACACTTTCCTCCACACTTAACTTTTTTCCACCACTCGCGGGTCGTCTTGTAATAACACAACACGACGAACCTAACAACGCCTCATGTTCCATCGTTTGTAACAACGTTGGTGCATTGTTTGTCCATGCCAAAGCAGAAAACACTACCATTGCCGACATCCTTCAACCAAAGTATGTTCCTCCCGTTGTGTCTTCGTTATTCTTATTCAACGAAGTGAAAAACTACGAAGGGACATCACAACCACTACTTGCAGTACAAGTAACAGAGTTAATCGATGGTATCTTCATTGGTTTTACAATTAACCATGTGTGTGTAGACGCGAAGTCATTTTGGCATTTCATCAACTCTTGGGCTGAAATCGCACAAGGTTTCAATAAGCCAACAAAAGTTCCTTCTTTCGAACGTTGGTTTCCAAATAATGTTAACCGTCCCATACGGTTTCCTTTCACAAAAGATGCACAAAATCAACAATGTGATGTTTCGTCTAATCGAATCTTCCACTTTACTAAAGAACAAATTCTGCAACTCAAATCAAAAGCTAATGCAGAAATTAGTAGTGGTAGTAGCAATAGTAGTGATAAAATAATAACGATATCTTCATTGCAAGCGCTTTTAAGTCACCTTTGGCGTTTATTTATAAGTAAACAAAATCGTAATTCAGAAGAAAGGTCGGCATTCGTGTTACCCATAGATTGTAGAACAAGAATGTGCCCAAAGTTAGAAGAGAATTATTTTGGGAATGGAATCGGAGCAGTTGGATGTGTAATAATGCAAATAGGGGAGTTAATGGAAAGTGGGATTGGTAAAATTGCTATGGAAATGAACAAGGAGATTTCATCAAAATCTCATCATGAGAAGATAATGAGTGATATTGAATCTTGGTTGAAAACGCCGTCGATACTAGAGCCAGTTAAATCAGCAAGTAATTTGTTGATAGCAAGCAGTTCACCACGGTTCAATTACTACGGTAATGACTTCGGTTGGGGTAAGCCTATTGCAGTTAGAAATGGTGTTGGACTTAAAAGAAATATTGGTATAGTTAATGTGCTTGGTGGGGAAGAAGAAGGTAGTATTGATATTGAAGTTTCTTTTCCTTATAATATTTTGGAGGCTATAGGAAACGACCCTATGTCCATGGATGCTTGA 1332 0.3739 MEEIQFISTTTIKATNHGDDDNSSDKIIHLSPWDLKFLKLAPIQRGLLFHKPKTNQIDHLKKTLSSTLNFFPPLAGRLVITQHDEPNNASCSIVCNNVGALFVHAKAENTTIADILQPKYVPPVVSSLFLFNEVKNYEGTSQPLLAVQVTELIDGIFIGFTINHVCVDAKSFWHFINSWAEIAQGFNKPTKVPSFERWFPNNVNRPIRFPFTKDAQNQQCDVSSNRIFHFTKEQILQLKSKANAEISSGSSNSSDKIITISSLQALLSHLWRLFISKQNRNSEERSAFVLPIDCRTRMCPKLEENYFGNGIGAVGCVIMQIGELMESGIGKIAMEMNKEISSKSHHEKIMSDIESWLKTPSILEPVKSASNLLIASSSPRFNYYGNDFGWGKPIAVRNGVGLKRNIGIVNVLGGEEEGSIDIEVSFPYNILEAIGNDPMSMDA* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0627 443 Gene3D - 223 436 IPR023213 -
Mtr4g0627 443 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 443 - -
Mtr4g0627 443 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 443 - -
Mtr4g0627 443 Gene3D - 2 207 IPR023213 -
Mtr4g0627 443 Pfam Transferase family 4 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0627 Mtr-Chr4 7895439 7896974 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0627 60 399 Monolignol Biosynthesis Gene Families AT5G48930 26.111 4.30e-22 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0627 - - mtr:MTR_4g094828 722.235