Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0593 ATGATTCCTCCTTCTCATAGTTCACTATACTATTGTTGTCAGTTTGTACTTGCTTTTGCACTTTTTAGTTTGCATATGTTAACTCCTCTTGAAGCTTATGGCTCAAAGGTTGAACACCTTCCTGGTTTTCAAGGGCCACTCCCTTTTGAACTTGAAACGGGGTACGTGGGGTTAGGAGATTCAAATGATGACATGCAAGTGTTTTACTATTTTGTAAAGTCAGAAAATAATCCTCAGAAAGACCCTCTTATGCTTTGGTTAACTGGTGGTCCTGGCTGTTCTTCTTTTTCTGGACTTGTGTATGAAATAGGTCCATTTGCATTTGAAATCAAGGAGTACAACGGGAGCGTGCCTAGTTTGGTCTTAAGGCCACAGTCATGGACAAAGCTATCCAACATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCAAAAAATGTCACGTATCACCGGAGCGACTGGAAACTTGTTCACAATACTTATCAATTTCTTAGGAAGTGGCTGATTGATCACCCTGAATTTCTTTCAAATGAATTCTACATTGGAGCTGATTCATACTCAGGCATTCCTGTCCCAGCCGTTCTTCAAGAAATTTCAAATGGAAATGAAAAAGGTCTCCAGCCATTGATAAATCTCCAGGGATATCTGCTAGGGAACCCCTATACAACACACAAAGAAGATAATTATCAAATCCAGTATGCTCATGGAATGGGACTCATCTCTGATGAACTTTATGCGTCATTGCAAAGAAATTGTAAAGGAGAGTACATTGATGTAGATTACAGAAATGAGTTGTGTTTAAGAGATCTCCGGTCCTTTGATGAGTGTCTCTCAGGAATTAATAAGGAAAACATTTTGGATGGCTTTTGTGAAGATGATTCGCGTCTGTGGAGGAGATCGTTGAAACAGGAGCTGGGCGCACCTCTTAGTTCTCCTCTCACAGTTCCCAAATTAAGCTGCCATATTTATCGTTTTTACCTCGCCACTAAATGGGCTAACGATGAGAGTGTTCGCAAGGCACTGCATATTCGAGAGGGAAGCATAGGGAAATGGGAACGATGTTACACTACTGATTTTGAGCGTGAGATCTTTAGTAGCGTTGAGTTTCATGTGAATCTAAGCAAAAAAGGATACCGCTCTTTGATATACAGTGGGGATCTTGATTTAGTTGTTCCTTTCCAGTCTACTCAAGCATGGATAAGGGATCTAAACTACTCCATTGTAGATGATTGGAGGTCATGGTTTGTAAATGGTCAAGTGGCAGGATACACAAGGACTTACTCAAATCGAATGACATTTGCAACTGTGAAGGGTTCAGGACATACAGCTCCTGCAGTCACTCCTGAGCAATGTTTAGCCATGTTCACCAGGTGGACATCTAATTTGCCTTTGTAA 1404 0.4074 MIPPSHSSLYYCCQFVLAFALFSLHMLTPLEAYGSKVEHLPGFQGPLPFELETGYVGLGDSNDDMQVFYYFVKSENNPQKDPLMLWLTGGPGCSSFSGLVYEIGPFAFEIKEYNGSVPSLVLRPQSWTKLSNIIFVDLPLGTGFSYAKNVTYHRSDWKLVHNTYQFLRKWLIDHPEFLSNEFYIGADSYSGIPVPAVLQEISNGNEKGLQPLINLQGYLLGNPYTTHKEDNYQIQYAHGMGLISDELYASLQRNCKGEYIDVDYRNELCLRDLRSFDECLSGINKENILDGFCEDDSRLWRRSLKQELGAPLSSPLTVPKLSCHIYRFYLATKWANDESVRKALHIREGSIGKWERCYTTDFEREIFSSVEFHVNLSKKGYRSLIYSGDLDLVVPFQSTQAWIRDLNYSIVDDWRSWFVNGQVAGYTRTYSNRMTFATVKGSGHTAPAVTPEQCLAMFTRWTSNLPL* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0593 467 Gene3D - 323 466 - -
Mtr4g0593 467 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 14 466 - -
Mtr4g0593 467 Pfam Serine carboxypeptidase 41 464 IPR001563 GO:0004185|GO:0006508
Mtr4g0593 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 466 IPR001563 GO:0004185|GO:0006508
Mtr4g0593 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 123 135 IPR001563 GO:0004185|GO:0006508
Mtr4g0593 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 146 IPR001563 GO:0004185|GO:0006508
Mtr4g0593 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Mtr4g0593 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185|GO:0006508
Mtr4g0593 467 SUPERFAMILY alpha/beta-Hydrolases 37 466 IPR029058 -
Mtr4g0593 467 Gene3D alpha/beta hydrolase 32 304 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0593 Mtr-Chr4 7517776 7522901 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0593 34 64 Calmodulin-binding Proteins AT2G22960 63.636 1.26e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0593 K16296 - gmx:100780069 711.064