Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0592 ATGAACATGATGGTTCCTCCTTCTCATAATTCACTTCACTATTTTTGTCAGATTCTACTTTCTCTTGTACTTCTTAGTTTGCATATGTTAACTCCTCTTGAAGCTTATGGCTCAAAGGTTGAACATCTTCCTGGTTTTCAAGGGCCACTTCCTTTTGAACTTGAAACTGGGTACGTAGGGTTAGGAGAAGCAAATGATGACATGCAAGTGTTCTATTATTTTGTAAAGTCAGAAAGTAATCCTCAGAAAGATCCTCTTATGCTTTGGATAACTGGTGGTCCTGGTTGCTCTTCTATTTCTGGCCTTCTCTATCAAATAGGTCCAGTTGCATTTGAAAACAAGGAGTACGATGGGAGCGTGCCTAGTTTGGTCTCAAGGCCACAGTCATGGACAAAGCTATGCAGCATTATTTTTGTAGATTTGCCACTTGGAACTGGTTTCTCATATGCAAAAAATGTCACTGCTCATCGAAGTGACTGGAAATTAGTTCGCGATGCTCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCTGAATTTCTTTCAAATGAATTCTACATTGCAGCTGATTCTTACTCAGGCATTCCTGTCCCGGCCCTTGTTCAAGAAATTTCAAACGGAAATGAAAAAGGTCTCCAACCATTGATAAATCTCAAGGGATATCTGCTAGGGAACCCCTTAACAACATTCAAAGAACAAAATTATCAAATCCCATATGCTCATGGAATGGGGCTCATTTCTGATGAACTCTATGCGTCACTGCAGAGAAATTGTAAAGGAGAGTATATTGATGTAGATTCCGGAAATGAGTTGTGTTTAAGAGATCTCCAGTACTTTCATGAGTGTCTCTCAGGAATTAATACATTCAACATTTTGGATAGCTATTGTGAAGATGATCCGCATCTCTGGAGAAGATCATTGATTCAGGAGTTGAAGAGTTCTCCTAGTTCTCATCTCAAAGTGCCCGAATTAAGCTGCCAAATTTATAGTTTTTACCTCACCACAAAGTGGGCTAATGAAGAGAGTGTTCGCAAGGCGCTGCATATTCGAGAGGGAACCATAGGGAAATGGGAACGTTGTTACATGAATGATTTTGAGTATGATATATTTGGTAGCGTTGAGTTTCATGCAAATCTAAGCAAAAAAGGATACCGTTCTTTGATATACAGTGGAGATCACGATGCAGTTGTTCCTTTCATCTCTACTCAAGCATGGATAAGGAATCTAAACTACTCCATTGTAGATGATTGGAGGCCATGGTTTGTAAATGGCCAAGTAGGAGGATACACAAGGACTTACTCGAATCAAATGACATTTGTAACTGTGAAGGGTTCAGGACATACAGCTCCTGAGTACACTCCTGATCAATGTTTTGGCATGTTCACTAGGTGGATATCTAATTTACCTTTGTAA 1413 0.3963 MNMMVPPSHNSLHYFCQILLSLVLLSLHMLTPLEAYGSKVEHLPGFQGPLPFELETGYVGLGEANDDMQVFYYFVKSESNPQKDPLMLWITGGPGCSSISGLLYQIGPVAFENKEYDGSVPSLVSRPQSWTKLCSIIFVDLPLGTGFSYAKNVTAHRSDWKLVRDAHQFLRKWLIDHPEFLSNEFYIAADSYSGIPVPALVQEISNGNEKGLQPLINLKGYLLGNPLTTFKEQNYQIPYAHGMGLISDELYASLQRNCKGEYIDVDSGNELCLRDLQYFHECLSGINTFNILDSYCEDDPHLWRRSLIQELKSSPSSHLKVPELSCQIYSFYLTTKWANEESVRKALHIREGTIGKWERCYMNDFEYDIFGSVEFHANLSKKGYRSLIYSGDHDAVVPFISTQAWIRNLNYSIVDDWRPWFVNGQVGGYTRTYSNQMTFVTVKGSGHTAPEYTPDQCFGMFTRWISNLPL* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0592 470 Gene3D alpha/beta hydrolase 35 307 IPR029058 -
Mtr4g0592 470 Pfam Serine carboxypeptidase 44 467 IPR001563 GO:0004185|GO:0006508
Mtr4g0592 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Mtr4g0592 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Mtr4g0592 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Mtr4g0592 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 437 450 IPR001563 GO:0004185|GO:0006508
Mtr4g0592 470 Gene3D - 326 469 - -
Mtr4g0592 470 SUPERFAMILY alpha/beta-Hydrolases 40 469 IPR029058 -
Mtr4g0592 470 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 15 469 - -
Mtr4g0592 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 15 469 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0592 Mtr-Chr4 7502714 7509155 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0592 37 67 Calmodulin-binding Proteins AT2G22960 66.667 3.28e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0592 K16296 - gmx:100780069 721.85