Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0580 ATGGAACAGGATCAATGTTGGATTCAAACAAAGAGAAAGTACTCAATGAGTAATTCAAATCTTGCTAGTTCACTAACTAACCCTTCTTCTTCTTGTTATGGTGATTCATGGGAAGAACAAGCTTTTGCTGAAGATGCAGCTGCAGGGTCACTTGGAGGATGTATATGGCCACCAAGATCATATTCTTGTAGCTTTTGTAGAAGAGAGTTTAGGTCAGCACAAGCATTAGGTGGACATATGAATGTTCATAGAAAAGATAGAGCAAGACTCAAACAACAACCACAAAATGATCAAATTCTTTATCATAATCATCATCATCACCATCATCACGAGCTTGAAATCGCGACTCATCATGTTCAAAATCCACTTATTCAAAATGTTTATAATAATAACCTATTCCCTAATTCTCCTTCTTGTGGTTTGGTTTATAATAAAACTAACCCTAATTCTCATCTTGATCATTTTGTATCTTCAACTTCATCCCCTTCGTCGGCTTCTAAGGCTTTATTCGGAGATGAAACCCTAATTTCTCCTTTCAACTCTTCTGAATCATGGCTGAATTTACCTGGAAATGATATATTATGTTCAACAAAGTTTCAACTTGCTGTTGATAATTTTGATCAAAAAGTCTCCAAAGGTATAATAGATGCTAGGTTTCGAGATAAAGGGGGAAACGACGATGAAAGTGATGTAGCTATGAGCTTGAATTTGGTTTTGTGTAGAACTCATCCACTTGTTGAATTTGAGAGTACTAAAGAAGAAGATTTCAATTGCAAGAAGAGGAAAATAGATTCTTCATCAAATCAATTATTCTCTAACTCAAGCACCTTTGATAAACAACAAAATATGCAAGCAAAGATGTTTGAGTTCAACCCTAATTCAATTGAGGAGGTAGATCTGGAGTTAAGGCTTGGTACAAGGTCCAAGGTATAG 933 0.3558 MEQDQCWIQTKRKYSMSNSNLASSLTNPSSSCYGDSWEEQAFAEDAAAGSLGGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQQPQNDQILYHNHHHHHHHELEIATHHVQNPLIQNVYNNNLFPNSPSCGLVYNKTNPNSHLDHFVSSTSSPSSASKALFGDETLISPFNSSESWLNLPGNDILCSTKFQLAVDNFDQKVSKGIIDARFRDKGGNDDESDVAMSLNLVLCRTHPLVEFESTKEEDFNCKKRKIDSSSNQLFSNSSTFDKQQNMQAKMFEFNPNSIEEVDLELRLGTRSKV* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0580 310 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Mtr4g0580 310 PANTHER C2H2 AND C2HC ZINC FINGER PROTEIN 1 309 - -
Mtr4g0580 310 SUPERFAMILY beta-beta-alpha zinc fingers 58 88 IPR036236 -
Mtr4g0580 310 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 88 IPR013087 -
Mtr4g0580 310 PANTHER OS07G0101800 PROTEIN 1 309 - -
Mtr4g0580 310 Pfam C2H2-type zinc finger 61 85 - -
Mtr4g0580 310 SMART c2h2final6 61 83 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0580 Mtr-Chr4 7381811 7383583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0580 28 306 C2H2 Transcription Factor Family AT2G37740 31.186 3.56e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0580 - - mtr:MTR_4g021270 610.527