Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0575 ATGAGCTACAACTACAAAGTGTTCTTGAGTATCTGCGCTCAGGACAGGGATCATTTTATTTGGCATCTCAATACGGTTCTTCGTTCAAAAGCTGGAACCGCTCTTTTCGGGGTTGAGGAGAGGTTGCAATATGAGTCAGAACTCGATGCAATAGTTGGATACTGCAAGCTTGCTATAGTCGTTTTTTCAAGTAATTATAACAAATCAATATCGTGTGTTCAAGAATTGGAGAAAATAACTGAATGTTGTCGAACCTCAGACTTGGTTGTTTTTCCTGTGTTCTTTGATGGTGTCTATCCCTTGCATGAAAGATCAGAGGGAGGTATGTTTGATGGAAACGCTTTTCATGATTTTATCGATAGAATCGGTAAAGACAAAGACAAGTTTTTGAGTTGGGTAGTAGGGGTCACTAAAGCTACCGAATATTTTGGGCCGAGTGATCTCATTTACAGGTACGAACATGAATATGTTCAGGATTATATTAGGGACATAGGTGAACATGTAAGTCGTGTACTGAAAAAGAGAGACTCATTCAGTGCTTTCTATACAAAGAGCATAAATTCAGGGGCGCAAGATGTGATTCAACTATTGAAACAGTCAAAATCTCCTCTCATACTAGGGATATGGGGGATGCCAGGGATTGGTAAATCAAGCATTGTCCATGCCATATGTAATCAAATTGGTCCCTATTTTGAGCACATGTCGTTCCTCGAAAATGCTGAGGGATTATGGAAAGATAAACTTCAAGTTTATTTAGAAGAGGAACTTATTTTTCATATTGACGAACAATTTGAACGTAATATATCTACAACAGAAGCAAGAAGAATGATTTCAAAAGAAAAACTTCGACATAAAAGGGTACTTCTTATACTTGACAATGTTGATAAATTGGATCAGCTAAAGGCTTTGTGTGGAAATCGGGAATGGTTTGGTCGAGGAAGCAAAATAATCATCACAACAAGAGATAGACATCTACTCAAGAAACATGGAGTTGACTATATCTACGGAGTGAAACAACTGGACGAAAGTGAATCGCTTGAGCTTTTTAATTTGGGTGCATTCAGACAAGCAACTTCTGGTAAAGATTTTGTTGAACTTTCGAGACAAGTAGTTGCTTATTCTGGGGGATTGCCTCTTGCTCTTAAAGTTCTTGGCAGCAATTTGTATTCGAAAAGAGTAGATTTCTGGGAGTCTGAGTTGCATTTGCTCAAAATGTTTCCACTACAAGAAGTACAAAGAGTTCTAGAAGATAGTTTTAATGATTTGAGTGATGTAGAGAGACGGGTATTCCTTGATATAGCACTTTTCTTTATCGGGATGAACCAAAATGATGTACTCGAAACATTAAATAGGTCAACACAATGCACAGATCTTCAAATAAGTCTCCTTCAAGACAAGAGCTTTGTAACCATCGATGAGAATAACAATCTTCAAATGCATGTTTTGCTACAATCCATGGCAAGAGATGTCATTAGGAGGAAATCAAGTAATAAGACCGATCAGCCAAAGGTGTACGATGTATTCTTGAGTTTCAGAGGGGAAGATAGTCGTGCAAAGTTCATGTCACATCTCTTTTCCTCTCTTCAAAATGAAGGGATTCATGCTTTCAAAGACGATAACGAGATTCAACGAGGAGATCAGATCTCAATCTCACTGTTGCGAGCAATTGGGCAGTCTAGAATTTCTATCATTGTTTTGTCTACAAATTATGCCAATTCAAGATGGTGTATGCTAGAGTTGGAGAAGATAATGGAAATTGGAAGAACCAAGGGTCTTATTGTTGTGCCAGTGTTCTATGAGGTAGCTCCCTCAGAAGTACGTGATCAGAAAGGTCGGTTTGGAAAAGCTTTTAAAAAGTTGATATCGAAAATCTCAATGGATGAATCCAAAAAGAGTAATTGGAGAAGAGATCTCTTTGATATTGGTGGCATAGCTGGGTTTGTACTCTTAGGTTCCAGGAATGAAAGTGCTGATATCAAAAACATTGTTGAACGTGTCACACATTTGCTTGATAGGACAAAGTTATTTGTTGCTGAACATCCAGTGGGTTTAGAATCTCGTGTGGACACTGTGATTAAGCTATTAAACATAAAAAAATCAGATGTTTTACTTCTTGGGATATGGGGAATGGGGGGTACAGGTAAAACAACCATTGCCAAAGCCATTTATAATCAAATTGGGAGCAAATTTGAGGGAATGAGCTTCCTTTTGGGTGTACGGGAATTCTGGGAGACACATACTAATCTAGTTTCACTGCAGCAACAGGTACTTTGTGATGTTTACAAAACAACAACATCCAAGATACATGACATCGAATCAGGGAAAATTATATTGAAGCAAAGACTTGCTCAGAAAAGGGTGCTTTTTGTGCTTGATGATGTAACTGAATTGCACCAACTAAATGCTTTGTGTGGAAGTCGCGAATGGTTTGGTTCCGGAAGTAGAATAATCATCACGACAAGAGATATGAGGCTCCTAAGATCATGTGATCAATTGTATGCTATAAAAGAAATGGACGAAAGTGAATCTCTTGAGCTTTTCAGTTGGCATGCATTCAAGCTACCAAGTCCTCCAATCGATTTTGCTACACATTCAACAGATGTGATTGCTTATTCTGGAAGATTGCCACTAGCACTTGAAGTCCTTGGCTCCTATTTGTCTGACTGTGAAATAACAGAGTGGCAGAAAGTTTTGGAGAAACTCAAATGTATTCCCCATGATCAAGTACAGAAGAAGCTAAGAGTAAGCTTTGATGGTTTAAAAGATGTTACAGAGCAACAAATATTTCTCGATATAGCCTGTTTCTTTATTGGGATGGACCAAAATGATGTAATTCAAATATTAAATGGGTGTGGGTTTTTTGCTGATTCTGGAATGAAAATCCTTTTAGAGCGAAGCCTTGTAACTGTTGACAATGGGAACAAGCTTAGAGTGCATGATTTGTTGAGAGACATGGGAAGACAAATAATTTATGAGGAATCACCGTTGGATCCTGAGAACCGCAGTAGGTTGTGGCGTAGTGACGAAGTAATTGATATGTTATATAATGATTCTAATCTTAAGGGAGCAGAAGCTGTCAAGGGTCTGGCTTTGAAATTTCCAAAAGAAAATTTAGTTCGTCTAAATTCCAATGCATTTCAGAAGATGTATAAACTCAGATTGCTTCAACTTGCTGGGGTGAAACTTAAAGGAGATTTTAAACACCTTTCGAGAAATCTTAGATGGTTGTACTGGCATGGATTTCCATTAACTTACATTCCTGCAGAATTTCAGCAAGAAAGTCTAGTTGCCATCGAATTGAAATATAGTAATCTCACACAAACGTGGAAGAAGAACAAGATGCTAAAGAACTTAAAAATTCTTAATCTTAGTCATTCTCAGGATTTGACTGAAACTCCAGACTTCTCATATATGCCGAATCTTGAAAAGCTAGTACTCAAAGACTGTCCAAGTTTGTCTGCGGTCTCCCATAGCATTGGATCTCTCCATAAACTTCTTCTGATAAATTTAACGAACTGCACAGGTCTTCGGAAACTTCCGAGAAGCATCTATACATTAAAATCTCTACAAACTTTGATTCTTTCTGGATGTTCCATGATTGACAAATTGGAGGAGGATTTGGTACAGATGGAATCTCTTATTACCTTGATTGCAGATAAGACTGCTATAAAAAAAGTTCCATTTTCAATAGTAAGAATGAAAAACATTGGATATATTTCTTTAAGCGGCTTTGAAGGATTTTCACGTGATGTATTCCCTTCTCTCATTCGCTCTTGGATGTCGCCTTCAAATAATGTGATATCCCTAGTTCAAACATATGTACCCATGTCATCACTTGCTTCTTCCAAGGACATTCAAAAACTTCGAATTCTTTGTGTGGAGTGTGGTTCAGATCTACAACTAACTCAAGATATAGCAAGATTTTTGGATGTATTAAAAGCCACAAAGTGTCAGAACTTGGAAGCAAGTGCAAGTTCAACTACATCACATATTTCTGATCTGTATGCGCCTGCTTTAACTGATGATTGCCTTGGTCAAGTTTGCACTTCAATGTCAAAGAATTACTTGAAATATCTCCTTATTCAGATGGGAACAAAATGCCAAGTCTCTAACATTGCCGAAGAATGTATTTTACAGACTGCAGATGAGACATCGGATTCATTTTTGCTTCCCTGTGACAATAATTGTGAATGGTCAAGCTTTAGTTGCAAAGGTTGTTCCATAATATTTGATATCCCAACAATAAAGGGGCGAAACCTGAAGAGTATGATATTGTTCATTGTCTATTACTCTTCCCCGGAGAACATAGCATCAGAAGGGTGTCAAGGTGTATTGATCATAAATTACACAAAGAGAATCATTCAGGTTTACAAAAGAGATACTCTAACCTCTTTTGGCCATGAGGATTGGCGGACCGTAACGTCAATTCTAGAACCTGGTAACAAAGTGGAGGTTATGGTTGTTTTAGGGGAAGGTTTCATTGCTGACAAGACTACAATATCTCTATCATATGATGAACCAGACGACAAAAAAATGGAACGCTGTCATGTAGTAGATGAGGAGGATGTTATTGTTTCTGGCAACGATGATAATAATGTCAGTGTTTCCAGTGGTGATGATGAAACCATCAATCGCTTTGGAGAGGAAACTATGAACCACATCCAGATTACCAAGCACGGCGATGGGTTATGTGTTGATGTCGTGGGACCGATACAGCTAGTACCAAATGACCTTGACCAGCCTGTAGAGGCAGTAGCTGAGGAGATTCATCCAGCTGAAGAACAACCTGATCAGGAGCACCATGTTCCTCCACCTGAGTGTGAGCCTGAACAGCATGCAACAGTAGCATCTGCGACCATAGAACCTACTCTAGGCGCTCAGATTTTGGATGCAATCAGAGAGCTCAGGGCTGATTTTGTCAGACACGAGCAGACTGTTACAGCTAGGTTCAATGCAGTAGAGGTGAGATTAGAGGAGCTTGCTGATGTCGTTACCCAGATACAGCGTGACGTAGAAAGTTAG 5022 0.3869 MSYNYKVFLSICAQDRDHFIWHLNTVLRSKAGTALFGVEERLQYESELDAIVGYCKLAIVVFSSNYNKSISCVQELEKITECCRTSDLVVFPVFFDGVYPLHERSEGGMFDGNAFHDFIDRIGKDKDKFLSWVVGVTKATEYFGPSDLIYRYEHEYVQDYIRDIGEHVSRVLKKRDSFSAFYTKSINSGAQDVIQLLKQSKSPLILGIWGMPGIGKSSIVHAICNQIGPYFEHMSFLENAEGLWKDKLQVYLEEELIFHIDEQFERNISTTEARRMISKEKLRHKRVLLILDNVDKLDQLKALCGNREWFGRGSKIIITTRDRHLLKKHGVDYIYGVKQLDESESLELFNLGAFRQATSGKDFVELSRQVVAYSGGLPLALKVLGSNLYSKRVDFWESELHLLKMFPLQEVQRVLEDSFNDLSDVERRVFLDIALFFIGMNQNDVLETLNRSTQCTDLQISLLQDKSFVTIDENNNLQMHVLLQSMARDVIRRKSSNKTDQPKVYDVFLSFRGEDSRAKFMSHLFSSLQNEGIHAFKDDNEIQRGDQISISLLRAIGQSRISIIVLSTNYANSRWCMLELEKIMEIGRTKGLIVVPVFYEVAPSEVRDQKGRFGKAFKKLISKISMDESKKSNWRRDLFDIGGIAGFVLLGSRNESADIKNIVERVTHLLDRTKLFVAEHPVGLESRVDTVIKLLNIKKSDVLLLGIWGMGGTGKTTIAKAIYNQIGSKFEGMSFLLGVREFWETHTNLVSLQQQVLCDVYKTTTSKIHDIESGKIILKQRLAQKRVLFVLDDVTELHQLNALCGSREWFGSGSRIIITTRDMRLLRSCDQLYAIKEMDESESLELFSWHAFKLPSPPIDFATHSTDVIAYSGRLPLALEVLGSYLSDCEITEWQKVLEKLKCIPHDQVQKKLRVSFDGLKDVTEQQIFLDIACFFIGMDQNDVIQILNGCGFFADSGMKILLERSLVTVDNGNKLRVHDLLRDMGRQIIYEESPLDPENRSRLWRSDEVIDMLYNDSNLKGAEAVKGLALKFPKENLVRLNSNAFQKMYKLRLLQLAGVKLKGDFKHLSRNLRWLYWHGFPLTYIPAEFQQESLVAIELKYSNLTQTWKKNKMLKNLKILNLSHSQDLTETPDFSYMPNLEKLVLKDCPSLSAVSHSIGSLHKLLLINLTNCTGLRKLPRSIYTLKSLQTLILSGCSMIDKLEEDLVQMESLITLIADKTAIKKVPFSIVRMKNIGYISLSGFEGFSRDVFPSLIRSWMSPSNNVISLVQTYVPMSSLASSKDIQKLRILCVECGSDLQLTQDIARFLDVLKATKCQNLEASASSTTSHISDLYAPALTDDCLGQVCTSMSKNYLKYLLIQMGTKCQVSNIAEECILQTADETSDSFLLPCDNNCEWSSFSCKGCSIIFDIPTIKGRNLKSMILFIVYYSSPENIASEGCQGVLIINYTKRIIQVYKRDTLTSFGHEDWRTVTSILEPGNKVEVMVVLGEGFIADKTTISLSYDEPDDKKMERCHVVDEEDVIVSGNDDNNVSVSSGDDETINRFGEETMNHIQITKHGDGLCVDVVGPIQLVPNDLDQPVEAVAEEIHPAEEQPDQEHHVPPPECEPEQHATVASATIEPTLGAQILDAIRELRADFVRHEQTVTARFNAVEVRLEELADVVTQIQRDVES* 1674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0575 1673 SMART AAA_5 202 341 IPR003593 -
Mtr4g0575 1673 SMART AAA_5 701 839 IPR003593 -
Mtr4g0575 1673 Gene3D - 837 921 IPR042197 -
Mtr4g0575 1673 Gene3D - 339 423 IPR042197 -
Mtr4g0575 1673 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 513 1504 - -
Mtr4g0575 1673 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 17 498 - -
Mtr4g0575 1673 Coils Coil 1200 1220 - -
Mtr4g0575 1673 PRINTS Disease resistance protein signature 704 719 - -
Mtr4g0575 1673 PRINTS Disease resistance protein signature 781 795 - -
Mtr4g0575 1673 PRINTS Disease resistance protein signature 872 886 - -
Mtr4g0575 1673 PRINTS Disease resistance protein signature 1113 1129 - -
Mtr4g0575 1673 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 498 IPR044974 GO:0006952
Mtr4g0575 1673 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 513 1504 IPR044974 GO:0006952
Mtr4g0575 1673 CDD AAA 193 297 - -
Mtr4g0575 1673 SUPERFAMILY Toll/Interleukin receptor TIR domain 495 646 IPR035897 -
Mtr4g0575 1673 Gene3D Ribonuclease Inhibitor 1017 1346 IPR032675 -
Mtr4g0575 1673 Pfam NB-ARC domain 685 907 IPR002182 GO:0043531
Mtr4g0575 1673 Pfam NB-ARC domain 192 422 IPR002182 GO:0043531
Mtr4g0575 1673 SMART till_3 504 644 IPR000157 GO:0007165
Mtr4g0575 1673 Pfam TIR domain 505 666 IPR000157 GO:0007165
Mtr4g0575 1673 Pfam TIR domain 5 110 IPR000157 GO:0007165
Mtr4g0575 1673 Gene3D - 178 333 IPR027417 -
Mtr4g0575 1673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 433 IPR027417 -
Mtr4g0575 1673 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 112 IPR035897 -
Mtr4g0575 1673 Gene3D - 676 836 IPR027417 -
Mtr4g0575 1673 SUPERFAMILY L domain-like 1031 1296 - -
Mtr4g0575 1673 ProSiteProfiles TIR domain profile. 503 652 IPR000157 GO:0007165
Mtr4g0575 1673 SUPERFAMILY "Winged helix" DNA-binding domain 908 1014 IPR036390 -
Mtr4g0575 1673 Gene3D - 1 177 IPR035897 -
Mtr4g0575 1673 Gene3D - 499 675 IPR035897 -
Mtr4g0575 1673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 667 932 IPR027417 -
Mtr4g0575 1673 ProSiteProfiles TIR domain profile. 3 130 IPR000157 GO:0007165
Mtr4g0575 1673 SUPERFAMILY "Winged helix" DNA-binding domain 410 495 IPR036390 -
Mtr4g0575 1673 Coils Coil 408 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0575 Mtr-Chr4 7322679 7332485 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0575 2 525 WRKY Transcription Factor Family AT4G12020 26.257 2.20e-32 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0575 - - cam:101511908 2111.26