Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0572 ATGGAAATTGGAAGAACCGGTGGTATGGTGGTTGTACCAGTCTTCTATGAGGTAGATCCCTCAGAAGTACGTCATCAAGAAGGTCAATTTGGAAAAGCTTTGGAAGATCTTATGTCAACAATCTCAATAGATGAATCCACAAAGAGTAATTGGAAAAGAGAACTCAATATTGGTGGCATAGCAGGGAACGAAAGTGATGATGTCAAGAATATTGTTGAACATGTCACCCGTTTGTTAGATAGGACAGAGTTATTCGTTGCTGAACATCCAGTGGGTGTAGAATCTCGCGTGGAAACTGTGACTAAACTACTAAACATCGAAAACTCAGAAGATGTTTTACTTCTAGGGATATGGGGAATGGGGGGTATGGGTAAAACAACCCTTGCCAAAGCAATTTATAATCAAATTGGGAGCAAATTTGAGGGAAGGAGCTTTCTTCTGAACATTAGGGAACTTTGGGAGACAGATACTAATCAAGTTTCTCTACAGCAACAAATACTTTGTGATGTTTGCAAAACAACGGCATTCAAGATACATGACATCGAATCAGGGAAAAATATATTGAAGGAAAGACTTTCCCAGAAGAAGGTACTTCTTGTGCTTGATGATGTGAATGAATTGGAGCAGCTAAAGGCTTTGTGTGGAAGCCACGAATGGTTTGGTCTGGGCAGTAGAATAATAATCACAACTAGAAATATGCGTCTTCTCAGATTGTATGAAATTTATCAAGTGTATGCAATAGAAGAAATGGATGAAAGTGAATCTCTTAAGCTTTTCAGTTGGCATGCATTCAAGCAACCAAGTCCGATAGAAGATTTTGCTAAACATTTAACAGATGTGATTTCTTATTCTGGGGGATTGCCACTAGCACTTGAAGTCCTCGGGTCCTATTTGTCTGACTGTGAAACAACAGACTGGCATAAAGTTTTGGAGAAACTCAAATGTATTCCTCATGATCAAGTACAGGAAAAACTAAAAGTAAGCTTCGATGGTTTAAAAGATTTTACAGAGAAACAAATATTCCTTGATATAGCTTGTTTCTTTATTGGGAGGGACCGAAATGATGTAATACGAATATTAAATGGGTGTGGATATTTTGCTGATATTGGAATTAAAGTCCTTGTTGAGCGAGCCCTTGTAACTGTTGACAATAGGAACAAGCTTAGAATGCATGATTTGTGA 1182 0.3807 MEIGRTGGMVVVPVFYEVDPSEVRHQEGQFGKALEDLMSTISIDESTKSNWKRELNIGGIAGNESDDVKNIVEHVTRLLDRTELFVAEHPVGVESRVETVTKLLNIENSEDVLLLGIWGMGGMGKTTLAKAIYNQIGSKFEGRSFLLNIRELWETDTNQVSLQQQILCDVCKTTAFKIHDIESGKNILKERLSQKKVLLVLDDVNELEQLKALCGSHEWFGLGSRIIITTRNMRLLRLYEIYQVYAIEEMDESESLKLFSWHAFKQPSPIEDFAKHLTDVISYSGGLPLALEVLGSYLSDCETTDWHKVLEKLKCIPHDQVQEKLKVSFDGLKDFTEKQIFLDIACFFIGRDRNDVIRILNGCGYFADIGIKVLVERALVTVDNRNKLRMHDL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0572 393 PRINTS Disease resistance protein signature 114 129 - -
Mtr4g0572 393 PRINTS Disease resistance protein signature 191 205 - -
Mtr4g0572 393 PRINTS Disease resistance protein signature 284 298 - -
Mtr4g0572 393 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 4 393 - -
Mtr4g0572 393 Gene3D - 1 86 IPR035897 -
Mtr4g0572 393 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 393 IPR044974 GO:0006952
Mtr4g0572 393 Pfam NB-ARC domain 94 315 IPR002182 GO:0043531
Mtr4g0572 393 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 344 IPR027417 -
Mtr4g0572 393 Pfam TIR domain 6 75 IPR000157 GO:0007165
Mtr4g0572 393 Gene3D - 249 333 IPR042197 -
Mtr4g0572 393 Gene3D - 87 243 IPR027417 -
Mtr4g0572 393 SUPERFAMILY "Winged helix" DNA-binding domain 320 388 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0572 Mtr-Chr4 7305881 7307400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0572 91 393 WRKY Transcription Factor Family AT5G45050 35.599 8.13e-51 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0572 - - cam:101511908 643.654