Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0570 ATGTCTTGCTTCACTTCCTCCTCCAAAATCCAACAGGAAATTGAATCCAGATCAACCACTGGTCCAAACAAGATGAGGTACAATGTGTTCTTGAGTTTCTGCGCTCAAGACATGGGTTATTTTCTTTCACGTCTCCATACGGCTCTTAGTTCACAAGCTGGAATCGTTGTTTTTGAGGACAAGAGGTTTCAACATGGAGAACAGGTAGAGTCAGCGCTGAATGTAATTCAAGACTGCAAAATTGTTATAGTAGTATTTTCAAAAAATTATGCTAACTCGAGTTCGTGTATACAAGAATTGGAGAAAATAACTAAGTGCTGCAGAGACTCAGAATTGATTGTCCTACCTGTGTTCTATGCTGCTGTCAATCCCACGTACGGAAGTTTAGAGGGAGGTATGTTTGGAGGAGACACTTTTCATGATTTTCTCAACAGAATATCAATGGAGGAAATCTCTAAAGAAGAGGACAAGCTCATGACCTGGGTAGCAGCGATCACTAAAGCAAACAATTATTTAGGTTCAAGTGATCTCATACATAAACCAATATATAGGTACGAACATATAAATATTAAGGGTTACATTAAGGATATAGTTGAACATGTTTCTTGTGTTATAAACAAGAATAGAGTTTTTTCTGTGACTTCCTGTACACCCAGTGTAAAATCTGGTGTGCAAGATGTGATTCAACTATTGAAACGATCAAAAAGTCCTATCCTACTAGGGATATGGGGGATGACAGGGATTGGTAAATCAACCATTGCCAAAGCCATTTATGATCAAATTGGTCTTTATTTTGAGCACAAGTGCTTCCTCGAAAACATCGGGGGAATTTGGGAACAAAGTAATGATCATCAAGTTTCATTACAAGAGAAAATTCTTTTTTATATTGATGGACCAGCTGAAATAAAGGTAGCTCTATCTACAATTGAATCAGGAACAGAGATGTTAAAACAAAGCCTTCAACATAAAAGGGTACTTCTTGTACTTGACAATGTTGATAAATTGGAGCAGTTGAATGCTTTATGCAGAAGTCGGAAATGGTTTGGAGCAGGTAGTAAAATAATCATCACGACAACAGATAGACATCTACTCAAAGAGCATGGAGTTGACCATATATATAGAGTGAAAGAACTAGACGAAAGTGAATCGCTTGAGCTTTTGAATCAAGGTGTGTTCGGCCAAGCAACAGCTCCTCAAGAAGATTTTGGTGAACTTTCTAGACAAGTAGTTGCTTATTCTGGGGGACTGCCTCTTGGTGTTAAAGAACTTGGGAAGTTTTTGCATGGAAAAAATGTACGTGAGTGGAAGAGTGTGTTGAAAAGTCTCCAAAGATTTTCCATTCCTGCTCTACAACTACTAGAAGCTCTAGAAAAGAGTTTTAGTGATTTGAGTGATGAAGAGAAACACATATTCCTTGATATAGCATGTTTCTTTGACAACATGAACCAAAATGATGTACTTCAAACATTAAATAGGTCAACACAATCTGCAGCACTTCAAATAAGGCGTCTTGAAGACAAGAGCTTTCTAACCATTGATGAGAATAACAAGCTTGGAATGCATGTTCTGCTACAAGCCATGGCAAGAGACATCATTAAGAAGGAATCAAGAAATAAGACAGATAAGCCAAAGATGTATGATGTGTTCTTGAGTTTCAGAGGGGAAGACAATCGGGCAAAGTTTGTGTCACATCTCTATTCCTCCCTTCAAAATGCAGGGATTCATGTTTTCAAAGACGATGATGAGATTCAACGAGGAGATCATATCTCAATCTCACTGTTGCGAGCAATTGGACAGTCTAGAATTTCTATTGTTGTGTTGTCTACAAATTACGCCAATTCAAGATGGTGTATGCTAGAGTTGGAGAAGATAATGGAAATTGGCAGAAACAGGGGTCTGGTTGTTGTGCCAGTGTTCTACGAGGTAGCTCCCTCAGAAGTACGTCATCAGGAAGGTCCATTTGGGAAAGCTTTTGATGATCTTATATCTACAATTTCCGTGGATGAATCCACAAAGACTAATTGGAAAAGTGAACTCTTTGATATTGGTGGTATAGCAGGGTTTGTTCTCATAGATTCCAGGAATGAAAGTGCTGATATCAAGAATATTGTTGAACATGTCACCGGTTTGCTTGGTAGGACAGAGTTATTTGTTGCTGAACATCCAGTGGGTTTAGAATCTCGTGTGGAAGTTGCGACTAAGCTGCTAAACATCAAAAACTCAGAAGATGTATTAATTCTAGGGATATGGGGAATGGGGGGTATGGGAAAAACAACCCTTGCTAAAGCCATTCATAATCAAATTGGGAGCAAATTTGAGGGAAGGAGCTTCCTTTTGAACATTAGGGAAGTTTGGGACACAGATACTAATCAAGTTTCTCTACAGCAACAGATACTTCATGATGTTTACAAAGCACTGACATTCAAAATACGTGATATAGAATCAGGGAAAAATATATTGAAGGAAAGACTTGCCCAGAAAAGGATACTTCTTGTGCTTGATGATGTGAATGAATTGGACCAGCTAAAGGCATTGTGTGGTAGCCGCAAATGGTTTGGTCCGGGGAGTAGAATAATAATCACAACAAGAAATATTCATCTTCTTAGATTGTATGAAGTTTATCAGGTGTATACAATAGAAGAAATGGATGAAAGTGAATCTCTTAAGCTTTTCAGTTGGCATGCATTCAAGCAACCAAGTCCAATAGAATATTTTGCTAAACATTCAACAGATGTGATTGCTTACTCAGGGAGATTGCCACTAGCACTTGAAGTACTTGGTTCCTATTTGTCTGACTGTGAAATAACAAAGTGGCATAAAGTTTTGGAGAAACTAAAATGTATTCCTCATGATCAAGTACAAGAGAAACTAAAAGTAAGTTTCGATGGTTTAAAAGATTTTACTGAGAAACAAATATTTCTTGATATAGCTTGCTTCTTTATTGGGATGGATCAAAATGATGCAATTCAAATATTAAATGGGTGTGGATTTTTTGCTGATATTGGAATTAAAGTTCTTGTTGAAAGAGCCCTTGTAACTGTTGACAATAATAACAAGCTTAGAATGCATGATTTGTTAAGAGACATGGGAAGACAAATAATTTATGAGGAAGCACCAGCAGATCCTGAGAAGCGCAGTAGGTTATGGCGCCATGGGGAAGTGTTTGATATATTAGAAAAGTGTAAGGGAACAAAATCTGTCAAGGGGCTAGCTTTGGAGTTTCCAAGAAAAGATTGTCTGGAAACTAAAGCATTTAAGAAGATGAACAAACTCAGATTGCTTCGCCTCGCTGGGGTGAAGCTTAAGGGAGATTTTAAATACCTTTCAAGAGATCTTAAGTGGCTGTATTGGCATGGATTTCAAGAATCCTATGCTCCAGCAGAATTTCAGCAAGAAAGTCTTGTTGTCGTCGAATTAAAATACAGTAAGCTCAAACAAATATGGAACAAGAGCCAGATACTACAGAATCTAAAAATTCTTAATCTTAGTCATTCCCTGGATTTGACTGAAACCCCAGACTTTACATACTTACCAAATCTTGAAAAGCTAGTACTAAAAAATTGTCCAAGTTTGTCTACGGTCTCCCATAGCATTGGATCTCTACATAAAATTCTTCTCATAAATTTGACAGACTGCATAGGTCTTCGGAAACTTCCAAGAAGCATCTATACATTAAAATCTCTAGAAACTTTGATTCTTTCTGGATGTACCATGATTGAAAAATTGGAGGAGGACTTGGAACAGATGGAATCATTGATTACTTTGATTGCAGATAAGACTTCTATCACAAAAGTGCCATTTTCAATAGTAAGATTGAAAAATATTGGATATATTTCTTTTTGTGGCTTTGAAGGATTTTCACGCGACGTATTCCCTTCTCTCATTCGGTCTTGGATAGCGCCATCAAATAATGTTATATCCCTAATTCAAACATCTATGTCCATGTCATCACTTGGTACTTCTAAGGACCTTCAAAAACTTCGAATTCTTGGTGTGGAGTGTGATTCAGATCTACAACTAACTCAAGATATTGAAAGATTTTTGGATGTATTAAGAGCCACAAGGGATCCGAACTCGGAAGCAAGTGCAAGTTCAACTAGATCAGAGACCTCTGATTTGTATGCTTCTCCCTTAATTGATGATGGCCTTGGTCAAGTTTGCATTTCAAAGTCAAAGAATCATTTGAAATCTCTCATAGTTCAAATGGGAACAAAATTCCATGTCTCCAATGTTTCTGAAGACAGTCTTTTACAGACTGTAGATGGGACTTGGGATTCATTTTTGCTCCCTTGTGACTATAAGTCTGAATGGTTAACCTTCAATTGCAAAGGTTGTTCGATAAAATTTGATGTCCCAAAAATGAAGAGTAACCTGAAGAGTATGATGTTATCCGTTGTCTATTACTCTTCCCCGGAAATCATAACATCAGAAGGTTGCCATGGTTTGTTAATCATAAACTACACAAAGAAAACCATTCAAGCATATAAAAGAGATACACTAACCTCCTTTGATGATGAAGATTGGCATACCATAACATCAAATGTAGAACCTGGTAACAAAGTGGAGGTTATGGTTGTTTTTGGGGAGGGATTCATTGTTGAGAAGACTACCCTATCTTTACTGTATGATGATCCAGTCAACAAAGAAATGGAACGTTGTCAAGTAGTAGACGAGGAGGATGTTATTGTTTCTGACAATGACGATATTAAAGTTTGTGTTTCCGGTGGTGATAATGAATCCATCAATCGCTTTGGAGAGGGAATGGTACACATGCAGATGACCAGGCCCACTGATGGGTTGTATGCTGATGTGGGACTGGTTCTTCTAGTACCAGATGACGACCTTGACCAGCCTGAGGAGGAAGTAGAAGAGGAAATTCGTGCTGCTGAAGTAGAGGGTGATCAGGAGCTGGAGGTTTCTCTACCTGAGAGTCAGCCCGAGCTGAAAGCAGCTGCAAGTGAGACCATTGGACCGGCCCTAGGAGCTCAGATTTTGGATGCCCTCAAAGAGCTCAGGGATGATTTCGTCCGACTAGAGCAGACTGTTACTGCAGTAGAGGTCAAATTAGAGGAGCTCGAGGATGCCATTGCCCAAATACTGCGTCGATCGAGTTCTAAGTCCATTTCAATCCTTAGGTTTCTTTCAACGTTGCTCTTCCTTTTGTTGTTTTGTTGGTTTGTTTTTCTATAG 5190 0.3838 MSCFTSSSKIQQEIESRSTTGPNKMRYNVFLSFCAQDMGYFLSRLHTALSSQAGIVVFEDKRFQHGEQVESALNVIQDCKIVIVVFSKNYANSSSCIQELEKITKCCRDSELIVLPVFYAAVNPTYGSLEGGMFGGDTFHDFLNRISMEEISKEEDKLMTWVAAITKANNYLGSSDLIHKPIYRYEHINIKGYIKDIVEHVSCVINKNRVFSVTSCTPSVKSGVQDVIQLLKRSKSPILLGIWGMTGIGKSTIAKAIYDQIGLYFEHKCFLENIGGIWEQSNDHQVSLQEKILFYIDGPAEIKVALSTIESGTEMLKQSLQHKRVLLVLDNVDKLEQLNALCRSRKWFGAGSKIIITTTDRHLLKEHGVDHIYRVKELDESESLELLNQGVFGQATAPQEDFGELSRQVVAYSGGLPLGVKELGKFLHGKNVREWKSVLKSLQRFSIPALQLLEALEKSFSDLSDEEKHIFLDIACFFDNMNQNDVLQTLNRSTQSAALQIRRLEDKSFLTIDENNKLGMHVLLQAMARDIIKKESRNKTDKPKMYDVFLSFRGEDNRAKFVSHLYSSLQNAGIHVFKDDDEIQRGDHISISLLRAIGQSRISIVVLSTNYANSRWCMLELEKIMEIGRNRGLVVVPVFYEVAPSEVRHQEGPFGKAFDDLISTISVDESTKTNWKSELFDIGGIAGFVLIDSRNESADIKNIVEHVTGLLGRTELFVAEHPVGLESRVEVATKLLNIKNSEDVLILGIWGMGGMGKTTLAKAIHNQIGSKFEGRSFLLNIREVWDTDTNQVSLQQQILHDVYKALTFKIRDIESGKNILKERLAQKRILLVLDDVNELDQLKALCGSRKWFGPGSRIIITTRNIHLLRLYEVYQVYTIEEMDESESLKLFSWHAFKQPSPIEYFAKHSTDVIAYSGRLPLALEVLGSYLSDCEITKWHKVLEKLKCIPHDQVQEKLKVSFDGLKDFTEKQIFLDIACFFIGMDQNDAIQILNGCGFFADIGIKVLVERALVTVDNNNKLRMHDLLRDMGRQIIYEEAPADPEKRSRLWRHGEVFDILEKCKGTKSVKGLALEFPRKDCLETKAFKKMNKLRLLRLAGVKLKGDFKYLSRDLKWLYWHGFQESYAPAEFQQESLVVVELKYSKLKQIWNKSQILQNLKILNLSHSLDLTETPDFTYLPNLEKLVLKNCPSLSTVSHSIGSLHKILLINLTDCIGLRKLPRSIYTLKSLETLILSGCTMIEKLEEDLEQMESLITLIADKTSITKVPFSIVRLKNIGYISFCGFEGFSRDVFPSLIRSWIAPSNNVISLIQTSMSMSSLGTSKDLQKLRILGVECDSDLQLTQDIERFLDVLRATRDPNSEASASSTRSETSDLYASPLIDDGLGQVCISKSKNHLKSLIVQMGTKFHVSNVSEDSLLQTVDGTWDSFLLPCDYKSEWLTFNCKGCSIKFDVPKMKSNLKSMMLSVVYYSSPEIITSEGCHGLLIINYTKKTIQAYKRDTLTSFDDEDWHTITSNVEPGNKVEVMVVFGEGFIVEKTTLSLLYDDPVNKEMERCQVVDEEDVIVSDNDDIKVCVSGGDNESINRFGEGMVHMQMTRPTDGLYADVGLVLLVPDDDLDQPEEEVEEEIRAAEVEGDQELEVSLPESQPELKAAASETIGPALGAQILDALKELRDDFVRLEQTVTAVEVKLEELEDAIAQILRRSSSKSISILRFLSTLLFLLLFCWFVFL* 1730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0570 1729 Gene3D - 377 463 IPR042197 -
Mtr4g0570 1729 Gene3D - 881 965 IPR042197 -
Mtr4g0570 1729 Gene3D - 21 203 IPR035897 -
Mtr4g0570 1729 Coils Coil 1668 1702 - -
Mtr4g0570 1729 Gene3D - 540 716 IPR035897 -
Mtr4g0570 1729 PRINTS Disease resistance protein signature 746 761 - -
Mtr4g0570 1729 PRINTS Disease resistance protein signature 823 837 - -
Mtr4g0570 1729 PRINTS Disease resistance protein signature 916 930 - -
Mtr4g0570 1729 PRINTS Disease resistance protein signature 1223 1239 - -
Mtr4g0570 1729 Gene3D Ribonuclease Inhibitor 1049 1355 IPR032675 -
Mtr4g0570 1729 ProSiteProfiles TIR domain profile. 544 711 IPR000157 GO:0007165
Mtr4g0570 1729 ProSiteProfiles TIR domain profile. 25 159 IPR000157 GO:0007165
Mtr4g0570 1729 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 126 IPR035897 -
Mtr4g0570 1729 Gene3D - 717 875 IPR027417 -
Mtr4g0570 1729 Gene3D - 204 371 IPR027417 -
Mtr4g0570 1729 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 715 976 IPR027417 -
Mtr4g0570 1729 SMART AAA_5 743 880 IPR003593 -
Mtr4g0570 1729 SMART AAA_5 236 378 IPR003593 -
Mtr4g0570 1729 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 36 539 - -
Mtr4g0570 1729 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 554 1542 - -
Mtr4g0570 1729 SUPERFAMILY Toll/Interleukin receptor TIR domain 538 662 IPR035897 -
Mtr4g0570 1729 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 221 474 IPR027417 -
Mtr4g0570 1729 SUPERFAMILY "Winged helix" DNA-binding domain 454 537 IPR036390 -
Mtr4g0570 1729 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 36 539 IPR044974 GO:0006952
Mtr4g0570 1729 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 554 1542 IPR044974 GO:0006952
Mtr4g0570 1729 SUPERFAMILY L domain-like 1021 1332 - -
Mtr4g0570 1729 Pfam TIR domain 27 179 IPR000157 GO:0007165
Mtr4g0570 1729 Pfam TIR domain 546 707 IPR000157 GO:0007165
Mtr4g0570 1729 SMART till_3 26 171 IPR000157 GO:0007165
Mtr4g0570 1729 SMART till_3 545 685 IPR000157 GO:0007165
Mtr4g0570 1729 Coils Coil 487 507 - -
Mtr4g0570 1729 Coils Coil 1239 1259 - -
Mtr4g0570 1729 Pfam NB-ARC domain 730 947 IPR002182 GO:0043531
Mtr4g0570 1729 Pfam NB-ARC domain 224 448 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0570 Mtr-Chr4 7284068 7291559 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0570 27 548 WRKY Transcription Factor Family AT4G12020 27.444 5.13e-39 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0570 - - cam:101511908 2235.3