Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0567 ATGTCTCAACCAAAGGTGTACGATGTGTTCTTGAGTTTCAGAGGGGACGACGGTAGTGCAAAATTCGTTTCACATCTGCATTCTTCTCTTCAAAATGCAGGGATTTCTGTTTTCAGAGGTGACGAGATTCAACAAGGAGATGATATCTCAATCTCACTGTTACGAGCAATTCGACACTCAAGAATTTCTATAGTTGTTTTGTCGATAAATTATGCTAATTCAAGATGGTGTATGTTTGAGTTGGAGAAGATCATGGAAATTGGAAGAACCGGTGGTCTGGTGGTTGTACCAGTCCTTTATGAGGTAGATCCATCAGAAGTACGTCATCAAGAAGGTCAGTTTGGAAAAGCTTTGGAAGATCTTATCTTAGAAATCTCAGTGGATGAATCCACAAAGAGTAATTGGAGAAGAGACCTCATTGATATTGGTGGCAAAGATGGGTTTATAGTCACAGATTCCAGGAATGAAAGTGCAGATATCAAGAATATAGTTGAACATGTCACCCGTTTGCTAGATAAGACAGACTTATTTGTTGTTGAATATCCAGTCGGTGTCAGATCTCGAGTGGAAGATGTGACTAATTTACTAAATATCCAAAATTCAAATGATGTTTTACTTTTAGGGATCTGGGGAATGGGGGGCTTGGGCAAAACAACCCTTGCCAAAGCCATTTATAATCAAATTGGTATCAAATTTGAGGGAAGGAGCTTTCTTCTAAACATTAGGGAAGTTTGGGAGACAGATACTAATCAAGTTTCTCTACAGCAACAAATACTTTGTGATGTTTACAAAACAACAGAACTCAAGATACTTGACATTGAATCAGGGAAAAATTTATTGAAGGAAAGACTTGCTCAGAAAAGGGTACTTCTTGTGCTTGATGATGTGAATAAACTGGACCAACTAAAGGCTTTGTGTGGAAGCCGCAAATGGTTTGGTCCGGGGAGTAGAGTAATCATCACAACAAGAGATATGCGTCTTCTTAGATCGTGTAGAGTTGATCTAGTGTATACAGTAGTAGAAATGGATGAGAGGGAATCTCTTGAGCTTTTTTGCTGGCATGCATTTAAGCAACCATGTCCGCCAGAAGGTTTTGCTACACATTCAAGAGATGTGATAGTATATTCCGGGGGATTGCCACTAGCACTTCAAGTTCTTGGGTCCTATTTGTCTGGCTGTGAAACAACAGAGTGGCAGAAAGTTTTGGAGAAACTCAAATGTATTCCTCATGATCAAGTACAGAAGAAGCTGAAAGTAAGCTTTGATGGTTTAAAAGATGTTACAGAGAAACAAATATTCTTTGATATTGCTTGTTTCTTTATCGGGATGGACAAAAATGATATAATACAAATATTAAATGGGTGTGGATATTTTGGTGATATTGGAATTGAAGTCCTTGTACAACAGTCCCTTGTAACTGTTGACATTGGGAACAAGCTTAGAATGCATGATTTGTTGAGAGACATGGGAAGGCAAATAGTTTATGAGGAATCACCATTTCATCCTGAGATGCGCAGTAGGTTGTGGTTCCGTGAGGAAGTGTTTGATATGTTATCAAATCACAAGGGAACAGAAGCTGTTAAGGGTCTGGCTTTGGAGTTTCCAAGAGAAGTTTGTCTGGAAACCAAATCATTTAAGAAGATGAATAAACTCAGATTGCTTCGCCTTGCTGGGGTGAAGCTTAAAGGAGATTTTAAATATCTTTCAGGAGATCTGAAGTGGCTGTACTGGCATGGATTTCCAGAAACCTACGTTCCTGCAGAATTTCAGCTAGGAAGTCTAGTTGTTATGGAATTAAAATATAGTAAGCTTAAACAAATATGGAATAAGAGCCAGATGCTAGAGAATCTAAAAGTTCTTAATCTCAGCCATTCTCTTGATTTGACTGAAACACCAGACTTTTCATACATGCCAAATCTTGAAAAGCTTATACTCGAAGACTGTCCAAGTTTGTCTACGGTCTCCCATAGCATTGGATCTCTGCATAAAATTCTTCTGATAAATTTGACAGACTGCACAGGTCTTCGGACACTTCCGAAAAGCATCTATAAATTAAAATCTCTTGCAACTTTGATTCTTTCTGGATGTTCTATGCTTGACAAATTGGAGGACTTGGAACAGATGGAATCATTGACAACCTTGATTGCAGATAAGACTGCTATACCAGAAGTGCCCTCTTCACTGCCAAAGATGTACGATGTGTTCTTGAGTTTCAGAGGGGAAGACAATCGTCCAAGGTTCATATCACATCTCCATTCCTCTCTTCACAGTGCAGGGATTTATGCTTTCAAAGACGACGATGGGATTCAACGAGGAGATCAAATCTCGGTCTCACTGGGGAAAGCAATTGAACAGTCTAGAATTTCTATCGTTGTTTTGTCTACAAATTATGCTAATTCAAGATGGTGTATGTTAGAGTTGGAGAAGATCATGGAAGTTGGCAGAATGAACGGTCGGGTGGTTGTGCCAGTCTTCTATGATGTAGATCCCTCAGAAGTACGACATCAGAAAGGTCGGTTTGGAAAAGCTTTTGAAGAACTTTTATCAACTATCTCAGTGGATGAATCCACATATAGTAATTGGAGAAGACAACTCTTTGATATTGGTGGCATAGCTGGGTTTGTACTAGTAGGTTCCAGGAATGAAAGTGCAGCTGTAAAGAATATTGTTGAATATGTCACTCGTTTGCTGGATAGGACAGAGTTATTCGTTGCTGAACATCCAGTAGGAGTAGAACATCGTGTGCAAGCTGCAACTAAGCTATTGAACATCCAAAAATCAGAAGATGTTTTACTTCTAGGGATTTGGGGTATGGGGGGTACGGGTAAAACAACCCTTGCCAAAGCCATTTATAATCAAATTGGTAGCAAATTTGAGGGAAGGAGCTTTGTTCTAAATATCAGGGAATTTTGGGAGACAAATACCAATCTAGTTTCTCTACAGCAAAAGGTACTTTGTGATGTTTACAAAACATTAACATTCAAGATACGTGACATAGAATCAGGGAAAAATATATTGAAGGAAAGACTTTCCCAGACTAGTGTACTTCTTGTGCTAGATGATGTGAATAAATTGGACCAGCTAAAGGCATTGTATGGAAGCCGTGAATGGTTTGGTCCGGGGAGTAGAATTATCATCACAACGAGAGATAAGCATCTTCTTAGTTCGTGTCCAGTTGATGTAGTGTATACAATAGAAGAAATGGATGAAAGTGAATCTCTCAAGCTTTTCAGTTGGCATGCATTCAAGCAATCAAGTCCAAAAGAAGATTTTGCTAAACATTCAACAGATGTGATTGCATATTCTGGGGGATTGCCACTAGCACTTGAAGTCATTGGGTCATATTTGTCTGATTGTAAAATAACAACAGAGTGGGATAGTGTTTTGGAGAAACTCAAATGTATTCCTCATGATGAAGTACAGGAGAAACTAAAAGTAAGCTTTCATGGTTTAAAACATTTTACAGAGAAACAAATATTTCTTGATATAGCTTGTTTCTTTATTGGGATGGACAAAAAGGATGCGATCCAAATATTGAATGGGTGTGGGTTTTTTGCTGATGATGGAATTAAAGTCCTTGTTGAGAGAGCCCTTGTAACTGTTGACAATGAGAACAAACTTAGAATGCATGATTTGTTGAGAGACATGGGAAGGCAAATCATTTTTGAGGAATCACCAGAAGATCCTGAGAAGCGCAGTAGATTGTGGCGGCATGAGGAAGTGTTTGATATATTAGAAAAGCGTAAGGGAACAGAAGGTGTCAAGGGACTGGCTTTGGAGTTTCCAACAAGAGATTGTTTGGAAACAAAAGCATTTAAGAAAATGAATAAACTCAGATTACTTCGCCTTGCTGGGGTGAAGCTTAAAGGAGATTTTAAATATCTTTCAGGAGATCTGAAGTGGCTGTACTGGCATGGATTTCCAGAAACCTACATTCCTGCAGAATTTCAGCTACAAAGTCTAGTTGTTATGGAATTAAAATATAGTAAGCTTAAACAAATATGGAATAACAGCCAGATGCTAAAAAATCTAAAAATTCTTAATCTTAGTCATTCTCTGGATTTGACTGAAACCCCAGACTTTTCCTACTTACCTAATCTTGAAAAGCTCGTGCTCAAAAACTGTCCAAGTTTGTCTACGGTCTCCCAAAGCATTGGATCTCTACAAAAAATTCTTCTGATAAATTTGAGAGACTGCGCAGGTCTTCGGAAACTTCCAAGAAACATCTACAAGTTAAAATCTCTAGAAACTTTGATTCTTTCAGGATGTTCCATGATTGACAAATTGGAGGAGGACGTGGAACAGATGGAATCATTGACAACCTTGATTGCGGATAAGACTGCTATAACAAAAGTGCCATTTTCAATAGTAAGATTGAAAAGTATTGGATATATTTCTTTTCGTGGCTTTGAAGGATTTTCACGTGATGTATTCCCTTCTCTTGTTTGGTCTTGGATGTCGCCATCAAATAATGTGATATCCCTTGTTCAAACATCTGTGTCCATGTCATCACTTGGTACTTCCAAGGACCTTCAAAAACTTCGAATTCTTTGCGTGGAATGTCGTACAGATCTACAACTAACTGAAGAAATAGCAAGATTTTTGGAGGTATTAAAAGCCACAAATTGTGAGAACTTGGAAGGAAGTGCAAGTTCAACTACATCAGAGATCTCTGATATGTATGCTTCTCCCTTTATTGATGATTGCCCTGGTCAAGTTTGCATTTCAGGGTCAAAGAATCACCTCTTAATTCGAATGGGAACAAAATGCCATGTCTCTAATATTGCTGAAGACAGTTTTCTACAGACTACAGACGGGACTTCAGATCCATCTTTGCTCCCATGTGACGATAAATTTAATCGGTTAATCTTCAGTTGTAACGGTTGTTCTATAATATTTGATGTCCCAACAATGAAGGGGAGTAACCTGAAGAGTATAATGTTGTTCGTTGTCTATTACTCTTCCCCAGAAAACATAACATCAGAAGGTTGCAAAGGTATGTTAATCATAAATTACACAAAGAGAACCGTTCTGGTTTATAAAAGAGATACACTAACCTCCTTTGAGGACGAGGATTGGCAGAGCATAACATCAAATCTAGAACCTGGTAACAAAGTGGAGGTTATGGTTGTTTTTGCGAAGGGTTTCTTTGTTAAGAAGACTACATTATCTCTCTTATATGATGAACCAGTCGACAAAGAAATGCAACGTTGTTTTGTAGTAGACGAGGAGGATGTTATTGTTTCTGGCAATGACGATAATAATGTTAGTGTTTCTGGAGGTGATAATGAAGCCGTGCACCGCTTTGGTAAAGGGTTCACTGTGAACCGCATGTTGATTACCAAACGCGCTGATGGGTTGTATGCTGATGTCATGGGACTGGTACAACTAATACTACATGACCCTGACCTGCCTGCAGAGGTAGTAGCCGAGGAGATTCATGCAGCCGAAGCAGAGTGTGATACGGAGCAGCAGGTTCCTCCAACTGATGGTCAGCTTGAGCAGCAGGCAGAAGTAGTAGCACCTGTGGGCATTGGACCGGCCTTAACTCAGATTTTGGATGCTCTCAGAGAGCTCAAAGTTGATTTTGTCCGACTAGAGCAGACTGTTACTTCTAGGTTGAATGCAGTAGAGGTCAGATTAGAGGTACTTGAGGATGTCATTACCCAAATACCGCGTGGGTCGAGTTCTGACTAA 5697 0.3914 MSQPKVYDVFLSFRGDDGSAKFVSHLHSSLQNAGISVFRGDEIQQGDDISISLLRAIRHSRISIVVLSINYANSRWCMFELEKIMEIGRTGGLVVVPVLYEVDPSEVRHQEGQFGKALEDLILEISVDESTKSNWRRDLIDIGGKDGFIVTDSRNESADIKNIVEHVTRLLDKTDLFVVEYPVGVRSRVEDVTNLLNIQNSNDVLLLGIWGMGGLGKTTLAKAIYNQIGIKFEGRSFLLNIREVWETDTNQVSLQQQILCDVYKTTELKILDIESGKNLLKERLAQKRVLLVLDDVNKLDQLKALCGSRKWFGPGSRVIITTRDMRLLRSCRVDLVYTVVEMDERESLELFCWHAFKQPCPPEGFATHSRDVIVYSGGLPLALQVLGSYLSGCETTEWQKVLEKLKCIPHDQVQKKLKVSFDGLKDVTEKQIFFDIACFFIGMDKNDIIQILNGCGYFGDIGIEVLVQQSLVTVDIGNKLRMHDLLRDMGRQIVYEESPFHPEMRSRLWFREEVFDMLSNHKGTEAVKGLALEFPREVCLETKSFKKMNKLRLLRLAGVKLKGDFKYLSGDLKWLYWHGFPETYVPAEFQLGSLVVMELKYSKLKQIWNKSQMLENLKVLNLSHSLDLTETPDFSYMPNLEKLILEDCPSLSTVSHSIGSLHKILLINLTDCTGLRTLPKSIYKLKSLATLILSGCSMLDKLEDLEQMESLTTLIADKTAIPEVPSSLPKMYDVFLSFRGEDNRPRFISHLHSSLHSAGIYAFKDDDGIQRGDQISVSLGKAIEQSRISIVVLSTNYANSRWCMLELEKIMEVGRMNGRVVVPVFYDVDPSEVRHQKGRFGKAFEELLSTISVDESTYSNWRRQLFDIGGIAGFVLVGSRNESAAVKNIVEYVTRLLDRTELFVAEHPVGVEHRVQAATKLLNIQKSEDVLLLGIWGMGGTGKTTLAKAIYNQIGSKFEGRSFVLNIREFWETNTNLVSLQQKVLCDVYKTLTFKIRDIESGKNILKERLSQTSVLLVLDDVNKLDQLKALYGSREWFGPGSRIIITTRDKHLLSSCPVDVVYTIEEMDESESLKLFSWHAFKQSSPKEDFAKHSTDVIAYSGGLPLALEVIGSYLSDCKITTEWDSVLEKLKCIPHDEVQEKLKVSFHGLKHFTEKQIFLDIACFFIGMDKKDAIQILNGCGFFADDGIKVLVERALVTVDNENKLRMHDLLRDMGRQIIFEESPEDPEKRSRLWRHEEVFDILEKRKGTEGVKGLALEFPTRDCLETKAFKKMNKLRLLRLAGVKLKGDFKYLSGDLKWLYWHGFPETYIPAEFQLQSLVVMELKYSKLKQIWNNSQMLKNLKILNLSHSLDLTETPDFSYLPNLEKLVLKNCPSLSTVSQSIGSLQKILLINLRDCAGLRKLPRNIYKLKSLETLILSGCSMIDKLEEDVEQMESLTTLIADKTAITKVPFSIVRLKSIGYISFRGFEGFSRDVFPSLVWSWMSPSNNVISLVQTSVSMSSLGTSKDLQKLRILCVECRTDLQLTEEIARFLEVLKATNCENLEGSASSTTSEISDMYASPFIDDCPGQVCISGSKNHLLIRMGTKCHVSNIAEDSFLQTTDGTSDPSLLPCDDKFNRLIFSCNGCSIIFDVPTMKGSNLKSIMLFVVYYSSPENITSEGCKGMLIINYTKRTVLVYKRDTLTSFEDEDWQSITSNLEPGNKVEVMVVFAKGFFVKKTTLSLLYDEPVDKEMQRCFVVDEEDVIVSGNDDNNVSVSGGDNEAVHRFGKGFTVNRMLITKRADGLYADVMGLVQLILHDPDLPAEVVAEEIHAAEAECDTEQQVPPTDGQLEQQAEVVAPVGIGPALTQILDALRELKVDFVRLEQTVTSRLNAVEVRLEVLEDVITQIPRGSSSD* 1899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0567 1898 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 895 1163 IPR027417 -
Mtr4g0567 1898 SMART AAA_5 929 1066 IPR003593 -
Mtr4g0567 1898 SMART AAA_5 203 347 IPR003593 -
Mtr4g0567 1898 Pfam NB-ARC domain 914 1134 IPR002182 GO:0043531
Mtr4g0567 1898 Pfam NB-ARC domain 188 414 IPR002182 GO:0043531
Mtr4g0567 1898 SMART till_3 731 871 IPR000157 GO:0007165
Mtr4g0567 1898 SMART till_3 6 145 IPR000157 GO:0007165
Mtr4g0567 1898 CDD AAA 909 1050 - -
Mtr4g0567 1898 SUPERFAMILY "Winged helix" DNA-binding domain 412 518 IPR036390 -
Mtr4g0567 1898 Gene3D - 4 173 IPR035897 -
Mtr4g0567 1898 Gene3D - 729 898 IPR035897 -
Mtr4g0567 1898 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 742 1726 - -
Mtr4g0567 1898 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 15 740 - -
Mtr4g0567 1898 Gene3D - 1067 1152 IPR042197 -
Mtr4g0567 1898 Gene3D - 341 425 IPR042197 -
Mtr4g0567 1898 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 121 IPR035897 -
Mtr4g0567 1898 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 742 1726 IPR044974 GO:0006952
Mtr4g0567 1898 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 740 IPR044974 GO:0006952
Mtr4g0567 1898 ProSiteProfiles TIR domain profile. 5 171 IPR000157 GO:0007165
Mtr4g0567 1898 ProSiteProfiles TIR domain profile. 730 897 IPR000157 GO:0007165
Mtr4g0567 1898 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 436 IPR027417 -
Mtr4g0567 1898 PRINTS Disease resistance protein signature 206 221 - -
Mtr4g0567 1898 PRINTS Disease resistance protein signature 283 297 - -
Mtr4g0567 1898 PRINTS Disease resistance protein signature 376 390 - -
Mtr4g0567 1898 PRINTS Disease resistance protein signature 683 699 - -
Mtr4g0567 1898 Gene3D - 899 1062 IPR027417 -
Mtr4g0567 1898 Gene3D - 174 337 IPR027417 -
Mtr4g0567 1898 SUPERFAMILY L domain-like 1207 1547 - -
Mtr4g0567 1898 Gene3D Ribonuclease Inhibitor 1254 1405 IPR032675 -
Mtr4g0567 1898 Pfam TIR domain 7 169 IPR000157 GO:0007165
Mtr4g0567 1898 Pfam TIR domain 732 893 IPR000157 GO:0007165
Mtr4g0567 1898 Gene3D Ribonuclease Inhibitor 1406 1560 IPR032675 -
Mtr4g0567 1898 Gene3D Ribonuclease Inhibitor 533 721 IPR032675 -
Mtr4g0567 1898 SUPERFAMILY Toll/Interleukin receptor TIR domain 726 873 IPR035897 -
Mtr4g0567 1898 SUPERFAMILY L domain-like 528 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0567 Mtr-Chr4 7205169 7223015 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0567 1 731 WRKY Transcription Factor Family AT4G12020 32.357 2.77e-86 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0567 - - mtr:MTR_4g020850 3731.41