Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0565 ATGACCACAGATAGACATCTTCTCAAGGAGCATGGAGTTGACCATGTATATAGAGTGAAAGAATTGGAAGAAAGTGAATCATATGAGCTTTTTAATTGGGCTGCATTCAACCAAGCATGTTTGCCAGAAGGTTTTGCTGAACTTTCTAGACAGGTAGTTGCTTATTGTGGGGGATTGCCTCTTGCTCTTGAACTCCTTGGGTTGTATTTGCATGGAAGTGAAGTACTTAAGTGGAAAGGTGTGTTGAGGAGCCTCGAAAGATTTTCCATTCCATCTGGACAACTAGTAGAAGCCCTAGAAAAAAGTTTTCGATATTTGAGTGATGAAGAGAAACAAATATTCCTCGATATAGCATGTTTCCTTATCGGGATGAACCAAAATGATGTACTACAAACATTAAACATGTCAATGCAATGCACAACTCTTCAAATAAGTCTCCTTGAAGACAAGAGCTTTGTAACCATTGATGAGAATAACAAGCTTCAAATGCATGTTATGCAACAAGCCATGGCAAGAGATATCGTTACAAGGCAATCAAGTAAGAAGACTGATCAGATGAGTGGGTATCTCCCAAGCAATATGGGGCTCTTTGACAGACCCCCTCACGCTAGCACTACTAGGCTTGTGAGAAGTGCTGATATCAAGAATATTGTTGAACGTGTCACCCGTTTCCTAGATAAGACAGAGTTATTCGTTACTGAACATCCGGTGGGTGTAGAATCTTGTGTGGAAGCTTCCACTAAGCTACTTAACATCCAGAATTCAGAAGATGTTTTACTTCTAGGGATATGGGGAATGGGGGGTATGGGCAAGACAAACATTGCCAAAGCCATTTACAATCAAATTGGGAGCAAATTTGAGGGAAGGAGCTTCCTTCTGATTATAAGGGAATTTTGGGAGACATGTATTAATCTAGTTTCTCTACAGCAACAGGTACTTTGTGATGTCTACAAAACAACGACATTCAAGATACGTGACATAGAATCAAGGAAAAATATACTGAAGGAAAGACTTGCCCAGAGCAAGGTACTTCTTGTGCTTGATGATGTGAATGAATTGGATCAGCTAAAGGCTTTGTGTGGAAGCTATGAATGGTTTGGTCCAGGGAGTAGAGTAATCATCACCACAAGAGATATGCATCTTCTTAGATCGTGTAGAGTTGATCGAGTGTATGCAATACAAGAAATGGATGAAAGTGAATCTCTAGAGCTTTTCAGTTGGCATGCGTTCAAGCTACCAATTCCAGTAGAAGATTTTGCTGCACATTCAGAAGATGTGATTGTTTACTCTGGGAGATTGCCGCCACTAGCACTTGAAGTTCTGGGGTGCTATTTGTCTGACTGTGAAATAACAGAGTGGCAGAATGATAGCGATTTTCGCAAGTGTACGAAATCGTTCAAGTAG 1404 0.4053 MTTDRHLLKEHGVDHVYRVKELEESESYELFNWAAFNQACLPEGFAELSRQVVAYCGGLPLALELLGLYLHGSEVLKWKGVLRSLERFSIPSGQLVEALEKSFRYLSDEEKQIFLDIACFLIGMNQNDVLQTLNMSMQCTTLQISLLEDKSFVTIDENNKLQMHVMQQAMARDIVTRQSSKKTDQMSGYLPSNMGLFDRPPHASTTRLVRSADIKNIVERVTRFLDKTELFVTEHPVGVESCVEASTKLLNIQNSEDVLLLGIWGMGGMGKTNIAKAIYNQIGSKFEGRSFLLIIREFWETCINLVSLQQQVLCDVYKTTTFKIRDIESRKNILKERLAQSKVLLVLDDVNELDQLKALCGSYEWFGPGSRVIITTRDMHLLRSCRVDRVYAIQEMDESESLELFSWHAFKLPIPVEDFAAHSEDVIVYSGRLPPLALEVLGCYLSDCEITEWQNDSDFRKCTKSFK* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0565 467 PRINTS Disease resistance protein signature 260 275 - -
Mtr4g0565 467 PRINTS Disease resistance protein signature 337 351 - -
Mtr4g0565 467 PRINTS Disease resistance protein signature 431 445 - -
Mtr4g0565 467 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 185 IPR044974 GO:0006952
Mtr4g0565 467 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 199 455 IPR044974 GO:0006952
Mtr4g0565 467 Gene3D - 208 390 IPR027417 -
Mtr4g0565 467 SUPERFAMILY "Winged helix" DNA-binding domain 96 179 IPR036390 -
Mtr4g0565 467 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 199 455 - -
Mtr4g0565 467 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 2 185 - -
Mtr4g0565 467 Gene3D - 21 106 IPR042197 -
Mtr4g0565 467 Gene3D - 395 464 IPR042197 -
Mtr4g0565 467 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 456 IPR027417 -
Mtr4g0565 467 Pfam NB-ARC domain 244 449 IPR002182 GO:0043531
Mtr4g0565 467 Pfam NB-ARC domain 4 91 IPR002182 GO:0043531
Mtr4g0565 467 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 117 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0565 Mtr-Chr4 7158221 7165760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0565 237 442 WRKY Transcription Factor Family AT5G45050 32.857 2.20e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0565 - - mtr:MTR_4g020750 464.536