Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0564 ATGTCTTCCTTTATTCCCTCTTCTGCTAATTCAAAGAGTGAGAGGTACAATGTGTACTTGAGTTTCTGTCACCAAGACGCAGCCTCTTTTGCTACCGGTATCTATACAGCTCTTAATAGAAAATCTCGGTTTCATGTTTTCTGGGATGATGAGAAGCTTGGAAGCGGTGATCGAGGAATACCAACCTCAATTTTGAATGTTATAGAAGATTGCAAAGTTGCTGTAATAGTATTTTCAAGAAATTATGTTAATTCAAGATCGTGTCTTCAAGAATTTGAGAAGATAACCGAGTGTTGCCTAACCACAAGTGGTCTTATTGTTCTTCCAGTACTCTATGATGGTCTCAATCACTATTCCTCATTTGGAACAGTTGAAGAGACTTTTCATGATTTTGTGGATAGAATCTGGATAAAGGAAACAACCTCCGAAGAGAAAGATAAGTTTATGAGTTGGGTGGCAGCCGTCACGAAAGCTACCACATATTCAGGAGTAATTGATTTCGCGGACAGTTATGGAAGGGAGTATGTTGTGGATGTTGTGGAAAGTGTTACTCGTACGGTAAACAAGAAGAGAGACCTTTTTGGTGCTTTCTATACAGCAAGTGTAAAATCTGGTGTGCAAGATGTGATTCACCTGTTGAAACAATCAAGAAGTCCTCTCCTAATAGGGATATGGGGGATGGCAGGGATCGGTAAATCAACCATTGCCGAAGCCATTTATAATCAGATTGGTCCTTATTTTGAGCACAAGTACTTGCTTGACGACGTCAGGGAAGTTTGGAAAAGAGATGGAGGCCTAGTTTCTTTTGATGGTCCAGTTTCTTTACAAGAGAAACTTCTTTCTTATAGGGGCATACCAACTGAAATAAAGATAGGTACAATTGAATCAGGAAAAAATATTTTAAAAGAAAAACTTCATAATAAAAGGGTACTTCTTGTACTTGACAATGTTGATAAGCTGGAGCAGTTAAAGTCTTTGTGTGGAAATCGGGATTGGTTTGGTCCAGGTAGCAAAATAATCATCACTACCAGAGATAGGCATCTACTCAAGGAGCACAGAGTTGACCATATATATAAAGTGAAAGAATTGGATGAAAGTGAATCAATTGAACTTTTTAATTGGGCTGCATTCAACCAAGCAACAACTTCTCGAGAAGGTTTTGGTGAACTTTCAAGACAATTAGTTGCTTATTCTAGGGGATTGCCTCTTGCTCTTAAAGCACTTGGGGGTTTTTTGCATGGAAAAGAAGTACTTGAGTGGAAACGTGTGTTGAGGAGTCTTGAAACATTTTCCTTTCCAGATCAAGAAATACTACAAGTTCTAGAAACAAGTTTTGCTGATTTGAGTGGTGAAGAGAAACACATATTTCTTGATATAGCATGTTTCTTTAATAGGATGGACCAAAATGATGTACTCCATACCTTAAATAGGTCAACACAGTGCTCAGCTCTTCTAATAAGTCTCCTTGAAGACAAGAGCCTTGTAACCATTGATGAGAATAACAAGCTTGAAATGCATGGTCTTCTACAAGCCATGGCAAGAGATATCATTAAGAAGACTGATCAGCCGAAGCTGTACGATGTGTTCTTGAGTTTTAGAGGGGAAGACAGCCGTGCAAAGTTCATGTCACATATCTTTTCATCTCTGCAAAATGCAGGGATTCATACTTTCAGAGATGATGATCAGATTCAGCGAGGAGATCAAATCTCAGTCTCACTGTTGCGAGCAATCGGACAATCTAGAATTTCCATCATTATTTTGTCTACAAATTATGCTAATTCCAGATGGTGTATGCTAGAGTTGGTGAAGATAATGGAAATTGGTAGAACTAGGGGTCTGGTGGTTTTGCCAGTGTTTTATGAGGTAGATCCCTCAGAAGTACGTCATCAGGAAGGTCAGTTTGGAAAATCTTTTGAAGATCTTATCTCAACAATCTCAGTGGATGAATCCACAAAGAGTAATTGGAAAAGAGACCTCATTGATATTGGCGGCATAGCAGGCTTTGTACTCAAAGATTCCAGGAATGAAAGTGCAGATATCAAGAATATTGTTGAACATATCACCCATTTGCTAGATAGGACAGAGTTATTTGTTGCCGAACATCCAGTGGGTGTACAACCTCGTGTGGAAGCTGCAACTAAGCTACTAAACATCCAATATTCAGAAGATGTTTCACTTCTTGGGATCTGGGGAATGGGGGGAACTGGAAAAACTACCATTGCCAAAGCCATTTATAATCAAATTGGGAACAAATTTGAGGGGAGGAGCTTCCTTCTGAATATAAGAGAATTTTGGGAGACAAATATTAATCTAGTTTCTCTACAACAACAACTTCTTTGTGATGTTTACAAAACTACGACATTCAAGATACGTGACATAGAATCAGGGAAAAATACATTGAAAGAAAGACTTTCCCAGAATAGGGTACTTATTGTGCTTGATGATGTGAATGAATTGGACCAATTAAAGGCTTTGTGTGGAAGCCGTGAATGGTTTGGTCCGGGGAGTAGAATTATCATCACAACGAGAGATATGCATCTTCTTAGATCGTGTCGAGTTGATGAAGTGTATACTATAGAAGAAATGGGAGATAGTGAATCTCTTGAGCTTTTCAGTTGGCATGCATTCAATCAACCAAGTCCTACAAAAGATTTTGCTACACATTCAACAGATGTGATTGCTTATTCTGGGAGATTGCCTCTAGCACTTCAAGTCCTTGGTTCCTATTTGTCTGACTGTGAAATATCAGAATGGCAGAAAATGTTGGAGAAACTCAAATGTATTCCCCATGATCAAGTACAGAAGAAACTGAAAGTCAGCTTTGATGGTTTAAAAGATGTAACAGAGAAACAAATATTCCTTGATATTGCTTGTTTCTTTATTGGAATGGACCGAAATGATGCAATACAAATATTAAATGGGAGTGGATTTTTTGCTGATATTGGAATTAAAGTCCTTGTAGAGAGAAGCCTTGTAACTGTTGACAATAGGAACAAGCTTAGAATGCATGATTTGTTAAGAGACATGGGACGACAAATAGTTTATGAGGAATCACCATTTGATCCCGAGACGCGGAGTAGGTTGTGGCGGCGTGAGGAAGTATTTGATATTATATCAAAGCATAAGGGAACAGAAGCTGTCAAGGGACTGGCATTGGAGTTTCCAAGGAAGAATACAGTTTCTCTTAATACCAAAGCATTCAAGAAGATGAATAAACTCAGATTGCTTCAACTTTCCGGGGTTCAGCTTAATGGAGATTTTAAATACCTTTCAGGAGAACTTAGGTGGCTGTACTGGCACGGATTTCCATCAACTTACACTCCTGCAGAATTTCAGCAAGGAAGTCTTGTTTCCATCGAATTAAAATATAGTAGTCTAAAACAAATATGGAAGAAGAGCCAGTTGCTAGAGAATCTAAAAATTCTTAATCTGAGTCATTCTTGGGATTTGATTGAAACCCCAGACTTTTCATTCATGCCTAATCTTGAAAAGCTAGTACTCAAAGACTGTCCAAGATTAACTGCGGTCTCCCGTAGCATTGGATCTCTGCATAAACTTCTTCTAATAAATTTGACAGACTGCACAAGTCTTCAGAAACTTCCTAGAAGCATATATAAATTAAAATCTCTAGAAACTTTGATTCTTTCTGGATGTTCCAAGATTGACAAATTGGAGGAGGACTTGGAACAGATGGAATCATTGAAAACCTTGATTGCGGATAAGACTGCTATAACAAAAGTGCCGTTTTCAATAGTAAGATTAAGAAACATTGGATATATTTCTCTATGTGGCTTTGAAGGATTTTCACGAGATGTATTTCCTTTTCTCGTTCGGTCTTGGATGTCACCATCAACTAATGTAACATCCCTAGTTCAAACATCTACGTCAAAATCATCTCTTGGTACTTTCAAGAACCTTCTAAAGCTTCGAAATATTTTTGTAGAGTGTGGCTCAAAACTACAACTAACTGAAGATGTAGCCAGAATTTTGGATGCATTAAAAGCCACAATTTGTCATAAATATGAAGCAAATCCAAGTGCAACTACATCAGAAACCTCTGATATGTATGCTACTTCTATAATTGATGGTCAAGTTCGCATTTCAGGGTCAAATAATTATTTGAAATCTCTCTTAATTCAAATGGGAACGAAATGCCAAGTCTCTAATATTACCGAAGATGAAAATTTTCAGACTGCAGAGGCATCCTGGGATTCATTTGTGCTCCCCTGTGACAACAATTCTGATTGGCAAACCTTCCGTTGCAAAGGCTGTTGCATAATGTTTGATCTCCCAACAATGAAGGGGCGTAACCTGAAGAGTATGATGTTGTTCGTCGTCTATTACTCTTCCCCAGAAAGCATAGCTTCAGAAGGATGCCAAGGTGTGTTGATCATAAATTACACAAAGGCAACCATTCAGGCCTATAAAAGAGACACACTAACCTCCTTCGAGGATGAGGATTGGCAGAGCATAACATCAAATCTAGAGCCTAGTAACAAAGTAGAGGTTATGGTTGTTTTTGAGGAGGGATTCGTTGTACAGCATACAGAAGTATCGCTCTTATATGATGAACCACTTGACAAAGAAATGGAACACTGTTATGTAGTTGAAGAGGATGATGTTATTGTTTCTGTTTATGACGATAAGAATGTCTCTGTCTCTAGTGGTGATAATATTGATGTGCCAGAAGATTACAATGCTATCGGTCCAATTCAAGATAAAAATATAAGTGAAGATAAGCACTGGCATGCAGTGGATAAGAATGCTGTTGTTCCTGGTGATGATCATTCCATGGCAGCAAATAAGAATTACGCTGTGTCTGGTGGCGGTGTTGTGCCAGCAGATAAGAATGTGACCTTTTATGCGGAAGATGACAATGTGAGTGATAATAAAAACGGGGATGCGGTGGAATATGATGCTAATGGTTCTTGTATAGCAGATAAGAATGTTGTTTCCGGTGGGGATAAAAATAGATATCTTAGAATCTTCACCAAGCTTCCTTCACTTGTTCGTGCTGTTTTGATCTCGCAGCCTTTCTGGTCTAGTTTGGTTGGCATTCTGGTTTGGATCACTTATCGCCATTTTAAGAAGAGAAGTCCAAACCTTTTTACAAGATATACACGAAGGTGTAAATGGCTGGTGGATTGTGCACAAAGGCTTGCTACTTACAAGAAGGGCAGCAAAGCCCAATGTCATCCAGTCACATAG 5208 0.3858 MSSFIPSSANSKSERYNVYLSFCHQDAASFATGIYTALNRKSRFHVFWDDEKLGSGDRGIPTSILNVIEDCKVAVIVFSRNYVNSRSCLQEFEKITECCLTTSGLIVLPVLYDGLNHYSSFGTVEETFHDFVDRIWIKETTSEEKDKFMSWVAAVTKATTYSGVIDFADSYGREYVVDVVESVTRTVNKKRDLFGAFYTASVKSGVQDVIHLLKQSRSPLLIGIWGMAGIGKSTIAEAIYNQIGPYFEHKYLLDDVREVWKRDGGLVSFDGPVSLQEKLLSYRGIPTEIKIGTIESGKNILKEKLHNKRVLLVLDNVDKLEQLKSLCGNRDWFGPGSKIIITTRDRHLLKEHRVDHIYKVKELDESESIELFNWAAFNQATTSREGFGELSRQLVAYSRGLPLALKALGGFLHGKEVLEWKRVLRSLETFSFPDQEILQVLETSFADLSGEEKHIFLDIACFFNRMDQNDVLHTLNRSTQCSALLISLLEDKSLVTIDENNKLEMHGLLQAMARDIIKKTDQPKLYDVFLSFRGEDSRAKFMSHIFSSLQNAGIHTFRDDDQIQRGDQISVSLLRAIGQSRISIIILSTNYANSRWCMLELVKIMEIGRTRGLVVLPVFYEVDPSEVRHQEGQFGKSFEDLISTISVDESTKSNWKRDLIDIGGIAGFVLKDSRNESADIKNIVEHITHLLDRTELFVAEHPVGVQPRVEAATKLLNIQYSEDVSLLGIWGMGGTGKTTIAKAIYNQIGNKFEGRSFLLNIREFWETNINLVSLQQQLLCDVYKTTTFKIRDIESGKNTLKERLSQNRVLIVLDDVNELDQLKALCGSREWFGPGSRIIITTRDMHLLRSCRVDEVYTIEEMGDSESLELFSWHAFNQPSPTKDFATHSTDVIAYSGRLPLALQVLGSYLSDCEISEWQKMLEKLKCIPHDQVQKKLKVSFDGLKDVTEKQIFLDIACFFIGMDRNDAIQILNGSGFFADIGIKVLVERSLVTVDNRNKLRMHDLLRDMGRQIVYEESPFDPETRSRLWRREEVFDIISKHKGTEAVKGLALEFPRKNTVSLNTKAFKKMNKLRLLQLSGVQLNGDFKYLSGELRWLYWHGFPSTYTPAEFQQGSLVSIELKYSSLKQIWKKSQLLENLKILNLSHSWDLIETPDFSFMPNLEKLVLKDCPRLTAVSRSIGSLHKLLLINLTDCTSLQKLPRSIYKLKSLETLILSGCSKIDKLEEDLEQMESLKTLIADKTAITKVPFSIVRLRNIGYISLCGFEGFSRDVFPFLVRSWMSPSTNVTSLVQTSTSKSSLGTFKNLLKLRNIFVECGSKLQLTEDVARILDALKATICHKYEANPSATTSETSDMYATSIIDGQVRISGSNNYLKSLLIQMGTKCQVSNITEDENFQTAEASWDSFVLPCDNNSDWQTFRCKGCCIMFDLPTMKGRNLKSMMLFVVYYSSPESIASEGCQGVLIINYTKATIQAYKRDTLTSFEDEDWQSITSNLEPSNKVEVMVVFEEGFVVQHTEVSLLYDEPLDKEMEHCYVVEEDDVIVSVYDDKNVSVSSGDNIDVPEDYNAIGPIQDKNISEDKHWHAVDKNAVVPGDDHSMAANKNYAVSGGGVVPADKNVTFYAEDDNVSDNKNGDAVEYDANGSCIADKNVVSGGDKNRYLRIFTKLPSLVRAVLISQPFWSSLVGILVWITYRHFKKRSPNLFTRYTRRCKWLVDCAQRLATYKKGSKAQCHPVT* 1736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0564 1735 Pfam NB-ARC domain 206 432 IPR002182 GO:0043531
Mtr4g0564 1735 Pfam NB-ARC domain 713 934 IPR002182 GO:0043531
Mtr4g0564 1735 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 689 956 IPR027417 -
Mtr4g0564 1735 ProSiteProfiles TIR domain profile. 524 687 IPR000157 GO:0007165
Mtr4g0564 1735 SUPERFAMILY L domain-like 1001 1315 - -
Mtr4g0564 1735 Gene3D Ribonuclease Inhibitor 1044 1425 IPR032675 -
Mtr4g0564 1735 SUPERFAMILY "Winged helix" DNA-binding domain 436 520 IPR036390 -
Mtr4g0564 1735 SUPERFAMILY Toll/Interleukin receptor TIR domain 521 641 IPR035897 -
Mtr4g0564 1735 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 23 521 - -
Mtr4g0564 1735 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 534 1521 - -
Mtr4g0564 1735 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 208 459 IPR027417 -
Mtr4g0564 1735 SMART till_3 525 665 IPR000157 GO:0007165
Mtr4g0564 1735 SMART till_3 15 161 IPR000157 GO:0007165
Mtr4g0564 1735 Coils Coil 1221 1241 - -
Mtr4g0564 1735 Gene3D - 9 189 IPR035897 -
Mtr4g0564 1735 Gene3D - 520 698 IPR035897 -
Mtr4g0564 1735 PRINTS Disease resistance protein signature 726 741 - -
Mtr4g0564 1735 PRINTS Disease resistance protein signature 803 817 - -
Mtr4g0564 1735 PRINTS Disease resistance protein signature 896 910 - -
Mtr4g0564 1735 PRINTS Disease resistance protein signature 1205 1221 - -
Mtr4g0564 1735 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 163 IPR035897 -
Mtr4g0564 1735 SMART AAA_5 723 860 IPR003593 -
Mtr4g0564 1735 SMART AAA_5 218 364 IPR003593 -
Mtr4g0564 1735 Gene3D - 362 449 IPR042197 -
Mtr4g0564 1735 Gene3D - 862 945 IPR042197 -
Mtr4g0564 1735 Pfam TIR domain 16 130 IPR000157 GO:0007165
Mtr4g0564 1735 Pfam TIR domain 526 688 IPR000157 GO:0007165
Mtr4g0564 1735 ProSiteProfiles TIR domain profile. 14 135 IPR000157 GO:0007165
Mtr4g0564 1735 Gene3D - 699 858 IPR027417 -
Mtr4g0564 1735 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 534 1521 IPR044974 GO:0006952
Mtr4g0564 1735 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 521 IPR044974 GO:0006952
Mtr4g0564 1735 Gene3D - 190 357 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0564 Mtr-Chr4 7138439 7145913 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0564 65 546 WRKY Transcription Factor Family AT4G12020 29.116 1.39e-41 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0564 - - cam:101511908 2427.51