Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0561 ATGTTTGGAGATTCTTTTCATAATTTTGTGGATAGAATATTGATGCAGGAAACCTCCCATGAGGGGGACAAATTTATAAGTTGGGTTGCAACAATCAGTAAAGCTACTACATATTCAGGACCAATAGATCTTGTACAAATACCCCCAGACAGGAACAAAAGTGAATATATTGATAATCTGGTTGAACGTGTTACTCGTGTGATAAGCAATAAGAGAGGGTGGTTAAATTGTTTAAATACAATGAGCATAAATTCTCGTGTGCAAGATGTGATTCAACTATTGAAACAATCAAAATCTCCTCTACTTATAGGGATTTGGGGGATGGCAGGGATTGGTAAAACAACCATTGCCCAAGCCATTTATCATCAAATTGGTCCCTATTTTGCGGACAAGTGCTTTCTCAAAAAAGTCAAGGGAGCTTGGGAACAAGAAAGTGGTCAAGTTTTTTTACAACAGAAACTTATTTTTGACATTGACCAAGGAACTGAAATAAAGATACGTAAAATTGAATCAGGAAAACAAATTTTAAAATATAGATTTCGACACAAAAGGATACTTCTTGTTCTTGACAATGTTGATAAATTGGAGCAGCTAAATGCTTTGTGTGAAAATCCTGAATGGTTTGGTGTAGGAAGCAAAATAATCATCACATCTAGGAATAGACATCTCCTCAAGGAGCATGGATTTGACCATATATATAGAGTCAAAGAATTGGACGGAAGTGAATCGCTTGAGCTTTTTAATTACGGTGCATTCAGGCAAACAACACATCCTCAATAA 780 0.3577 MFGDSFHNFVDRILMQETSHEGDKFISWVATISKATTYSGPIDLVQIPPDRNKSEYIDNLVERVTRVISNKRGWLNCLNTMSINSRVQDVIQLLKQSKSPLLIGIWGMAGIGKTTIAQAIYHQIGPYFADKCFLKKVKGAWEQESGQVFLQQKLIFDIDQGTEIKIRKIESGKQILKYRFRHKRILLVLDNVDKLEQLNALCENPEWFGVGSKIIITSRNRHLLKEHGFDHIYRVKELDGSESLELFNYGAFRQTTHPQ* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0561 259 Gene3D - 64 230 IPR027417 -
Mtr4g0561 259 Pfam NB-ARC domain 86 256 IPR002182 GO:0043531
Mtr4g0561 259 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 255 IPR044974 GO:0006952
Mtr4g0561 259 PRINTS Disease resistance protein signature 102 117 - -
Mtr4g0561 259 PRINTS Disease resistance protein signature 179 193 - -
Mtr4g0561 259 SMART AAA_5 99 238 IPR003593 -
Mtr4g0561 259 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 2 255 - -
Mtr4g0561 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 255 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0561 Mtr-Chr4 7042928 7044484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0561 43 259 WRKY Transcription Factor Family AT4G12020 30.180 1.42e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0561 - - mtr:MTR_4g020550 461.07