Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0558 ATGCATGTTATGCTACAAGCCATGGCAAGAGGTATAATTAAGAGAGAATCAAGTCAAAAGACCGATCAGCCAAAGATGTATGATGTGTTTTTGAGTTTTAGAGGGGACGACAGTCGTGTGAAATTCGTTTCACATTTGAATTCCTCTCTTCAAAATTCCGCGATTCATGTTTTCAAAGACGATGACGAGATCGAACGAGGAGATCAGATCTCAATATCACTGTTGCGAGCAATTGGACGGTCTAGAATTGCCCTCGTTGTTTTGTCTAAAAAATATGCTAATTCAAGATGGTGTATGCTAGAGTTGGAGAAGATCATGGAAATTGGCAGGGCCAGGGGTCTGGTGGTTGTGCCAGTGTTCTATGAGGTGGATCCCTCAGAAGTACGTCATCAGAAAGGTGGTTTTGGAAAAGCCTTTGAAGATCTTATATCAACAATCTCGGTGGATGAATCCACAAAGAGTAATTGGAGAAGAGACCTCATTGATATTGGTGGCATAGCAGGGTTTGTACTCAAAGATTCCAGGAATGAAAGTGATGATATCAAGAATGTTGTTGAACATGTTACTCGTTTGCTAGATAGGAAAGAGTTATTTGTTGCTGAACATCCAGTGGGAATTGAATCTCGTGTGCAAGCTGCAACTAAGCTATTAAACATCCAAAACGCAGAAGATGTCTTACTTCTAGGGATATGGGGAATGGGGGGTATAGGCAAAACAACCATTGCCAAAGCCATTTATAATGAAATTGGTAGCAAGTTTGATGGAAAGAGCTTCCTTCTGAATATAAGGGAATTTTGGGAGACAGGTACTAATCAAGTTTCACTACAGCAACAAGTACTTTGTGATGTTTACAAAACAACTTCATTCAAGATACGTGACATTGAATCAGGGAAAAATATATTGAAGCAAAGACTTTCCCAGAAAAGGGTATTTTTTGTACTTGATGATGTTAATGAATTGGACCAACTAAAGGCTTTGTGTGGAAGCCGAGAATGGTTTGGTTCGGGGAGTAGAATAATCATCACAACAAGGGATATGCATCTTCTTAGATCATGCAGAGTTGATCAAGTGTATAAAATAGAAGAAATGGATGAAAGTGAAGCTCTTGCTCTTTTCAGTTGGCATGCATTCAAGAAACCAAGTCCGATAGAAGATTTTGCTACACATTCAACGGATGTGATTGCTTATTCTGGGAGATTGCCCCTAGCACTTGAAGTCCTTGGGTCCTATTTATCTGACTGTGAAATAACCGAGTGGCAGAAAGTTTTGGAGAAACTTAGATGTATCCCCCATGATCAAGTACAAAAGAAGCTAAGAATAAGTTTTGATGGTTTAAAAGATGTTACAGAGCAACAAATATTCCTTGATATAGCCTGTTTCTTGATTGGAATGGATAAAACTGATGCAATAAAAATATTAAATGGGTGTGGGTTTTTTGCTGATGTTGGAGTTAAAGTCCTGGTAGAGCGAAGCCTTGTTACTGTTGACAATAGAAACAAACTTAGAATGCATGATTTGTTGAGAGACATGGGAAGGCAGATAATTTATGAGGAATCACCATTGGATCCTGAGAACCGAAGTAGGTTGTGGCGTCGTGAGGAAGCGCTTGATATATTATCAATGCAGAAGGGAACAGAAGCTATCAAGGGTCTGGCTTTGAAGTTTCAGGGTGAAAAAACAGTTTGTCTGAATACTAACGCATTTAAGAAGATGAATAAGCTCAGATTGCTTCAACTTGCTGGTGTGCAACTGAATGGAGATTTTAAATGTCTTTCAAGAGATCTTAGATGGCTGTACTGGCATGGATTTCCATTAACTTACGTTCCTGCAGAATTTCAGCAAGGAAGTCTAGTTGCCATCGAATTAAAACATAGTAATCTCAAACAAATATGGAAGAAGAGCCAGATGGTAGAGAGTCTAACAATTCTTAATCTTAGTCATTCTCTACATTTGACTGAAACCCCAAACTTTTCATATATGCCTAATCTTGAAAAGTTAGTACTCAAAGACTGTCCAAGTTTGTCTGCGGTCTCCCATAGCATTGGATCTCTCCAAAAACTTCTTCTGATAAATTTGACAGACTGCACAGGTCTTCAAAAAATTCCAAGAAGTATTTATAAATTAAAATCTCTAGAAACCTTGATTCTTTCAGGATGTTCCAAGATTAACAAATTGGAGGAGGACATAGAACAGATGGAATCGTTGACAACCTTGATTGCGGATAAGACTGCTATAGCAGAAGTCCCCTTTTCAATAGTAAGACCAAAAAACATTGAATATATTTCTATTTGCGGCTTTGAAGGATTTTCAAATGATGTATTTCCTTCTATCATTCGGTCTTGGATGTCACCATCAAACAATGTGAAGTCCCTAGTTCAAACATCTGTGTTCAAGGACCTTCCTAAGCTTCAAAGTCTTCTTGTGGAGTGTAACTCTAAAGCACAACTTAGTCGAAATGTAAAAAATATTTTGGATGTGTTAAAAGCCACAAATTGTCGTAAATTGGATGAAAGCGAAACTATATCACAAAACTCTGATATGTTTCCTTCTCTTTTAATTGATGACTACCTTGGAGAAGTTAGCACAGGGTCAAAGAATTACTTGAAATCTTTCTTAATTCAAATGGGAACGAAATACCAAGTCTCCAATATTGCCGAAGACGGTGTTCTGCAGACAACAGATGGGACTTGCGATTCATTTTTGCTCCCCTGTGACAATATATCTGATTGGTTAACCTTTAGTTGCAAAGGTTCTTCTATAATATTTGATGTCCCAACAATGAAGGGGAGTGACTTGAAGAGTATGATGTTGTTCGTCGTCTATTACTCTACTCCGGAGAACATAACAGCAGAAGGTTACCATGGTGTGTTAATCATTAATCACACAAAGACAACCATTCAGGCCTATAAAAGAGATACACTAACCTCCTTTGAGGATGAGGATTGGCAGAACATAAAATCAAATCTAGAACCTGGTAATGAAGTGGAGGTTGTGCTTGTTTTTGGAGAGGGATTCATTGTGGAGAAGACAACAATATATCTCTTATATGTTGAATCAACGAACAAAGAAATGGAACACTGCAATGCAGTAGCGGAGGAGGATGCTATTGTTTCTGGGCATGAAGATACGGATGTCGGTGTACCTGATGGCTATAACCTTGATGTGCCACTGAGCAACAATGTCACTGGTCTTGGTCAATCAACGAACAAAGAAATGGAACACTGCAATTCAGTAGAGGAGGAGGATGCTATTGTTTCTGGGCATGAAGATACGGATGTCGGTGTACTTGATGGCTATAACCTTGATGTGCCACTGGGCAACAATGTCACTGGTCTTGGTCAATCAACGAACAAAGAAATGGAACACTGCAATTCAGTAGAGGAGGAGGATGCTATTGTTTCTGCGCATGAAGATATGGATGTCGGTGTACCTGATGGCTATAAACTTGATGTGCCACTGGGAAACAATGTCACTGGTCTTGGTCAAGATGAAAATATAAGTGAAGATAAGAACTTGCATGCAATGGATAAGAGTTCTGGTGATGATGCCATGGCAACAAATAAGAAATGTGCATGCTGTTTCTGGTGGCGGTGA 3594 0.3901 MHVMLQAMARGIIKRESSQKTDQPKMYDVFLSFRGDDSRVKFVSHLNSSLQNSAIHVFKDDDEIERGDQISISLLRAIGRSRIALVVLSKKYANSRWCMLELEKIMEIGRARGLVVVPVFYEVDPSEVRHQKGGFGKAFEDLISTISVDESTKSNWRRDLIDIGGIAGFVLKDSRNESDDIKNVVEHVTRLLDRKELFVAEHPVGIESRVQAATKLLNIQNAEDVLLLGIWGMGGIGKTTIAKAIYNEIGSKFDGKSFLLNIREFWETGTNQVSLQQQVLCDVYKTTSFKIRDIESGKNILKQRLSQKRVFFVLDDVNELDQLKALCGSREWFGSGSRIIITTRDMHLLRSCRVDQVYKIEEMDESEALALFSWHAFKKPSPIEDFATHSTDVIAYSGRLPLALEVLGSYLSDCEITEWQKVLEKLRCIPHDQVQKKLRISFDGLKDVTEQQIFLDIACFLIGMDKTDAIKILNGCGFFADVGVKVLVERSLVTVDNRNKLRMHDLLRDMGRQIIYEESPLDPENRSRLWRREEALDILSMQKGTEAIKGLALKFQGEKTVCLNTNAFKKMNKLRLLQLAGVQLNGDFKCLSRDLRWLYWHGFPLTYVPAEFQQGSLVAIELKHSNLKQIWKKSQMVESLTILNLSHSLHLTETPNFSYMPNLEKLVLKDCPSLSAVSHSIGSLQKLLLINLTDCTGLQKIPRSIYKLKSLETLILSGCSKINKLEEDIEQMESLTTLIADKTAIAEVPFSIVRPKNIEYISICGFEGFSNDVFPSIIRSWMSPSNNVKSLVQTSVFKDLPKLQSLLVECNSKAQLSRNVKNILDVLKATNCRKLDESETISQNSDMFPSLLIDDYLGEVSTGSKNYLKSFLIQMGTKYQVSNIAEDGVLQTTDGTCDSFLLPCDNISDWLTFSCKGSSIIFDVPTMKGSDLKSMMLFVVYYSTPENITAEGYHGVLIINHTKTTIQAYKRDTLTSFEDEDWQNIKSNLEPGNEVEVVLVFGEGFIVEKTTIYLLYVESTNKEMEHCNAVAEEDAIVSGHEDTDVGVPDGYNLDVPLSNNVTGLGQSTNKEMEHCNSVEEEDAIVSGHEDTDVGVLDGYNLDVPLGNNVTGLGQSTNKEMEHCNSVEEEDAIVSAHEDMDVGVPDGYKLDVPLGNNVTGLGQDENISEDKNLHAMDKSSGDDAMATNKKCACCFWWR* 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0558 1197 Gene3D Ribonuclease Inhibitor 547 700 IPR032675 -
Mtr4g0558 1197 Gene3D Ribonuclease Inhibitor 701 853 IPR032675 -
Mtr4g0558 1197 Pfam TIR domain 27 191 IPR000157 GO:0007165
Mtr4g0558 1197 Gene3D - 200 360 IPR027417 -
Mtr4g0558 1197 Gene3D - 362 446 IPR042197 -
Mtr4g0558 1197 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 457 IPR027417 -
Mtr4g0558 1197 PRINTS Disease resistance protein signature 227 242 - -
Mtr4g0558 1197 PRINTS Disease resistance protein signature 304 318 - -
Mtr4g0558 1197 PRINTS Disease resistance protein signature 397 411 - -
Mtr4g0558 1197 PRINTS Disease resistance protein signature 706 722 - -
Mtr4g0558 1197 Gene3D - 21 199 IPR035897 -
Mtr4g0558 1197 ProSiteProfiles TIR domain profile. 25 188 IPR000157 GO:0007165
Mtr4g0558 1197 SUPERFAMILY L domain-like 501 835 - -
Mtr4g0558 1197 SMART till_3 26 166 IPR000157 GO:0007165
Mtr4g0558 1197 Pfam NB-ARC domain 210 429 IPR002182 GO:0043531
Mtr4g0558 1197 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 35 1016 - -
Mtr4g0558 1197 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 35 1016 IPR044974 GO:0006952
Mtr4g0558 1197 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 164 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0558 Mtr-Chr4 7021471 7036425 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0558 12 752 WRKY Transcription Factor Family AT4G12020 31.062 1.36e-87 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0558 - - mtr:MTR_4g020535 2202.17