Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0552 ATGGCTTTGTCCCGCATTCACTGCCACCTTAATCTTCCTTTCCCGTCCGATGCGGCGCGTATTTCGTCATCATCTCATAATTCATCCCTTCCTATTTCTTCTCCAAAAGCAAAGAACCCTTTTTCAATTGTTAAGCGCCGAAGCAGCTTTGGAGCAGTGAAGTCTCAGATGACAATGGAAGACAAACCTCTCTCTCAAAACAACAGAATGCTTGTGTATGTGCCAGCACATCCTTTGATCAAGCACTGGGTTTCGGTACTGAGGAATGAGCAAACTCCCTGTCCCATTTTCAGAAATGCAATGGCTGAGTTGGGAAGGTTGCTAATTTACGAAGCTTCAAGGGATTGGTTGCCAACTGTGTCTGGAGAGATTCAATCACCACTAGGTGTTGCTTCAGTGGAGTTCATTGATCCAAGGGAGCCTGTGGCTGTAATTCCGATCTTGAGAGCTGGTCTTGCTCTTGCTGAACATGCATCGTCAATCTTGCCTGCAACAAAAACATATCATCTAGGAATAACCAGAAATGAAGAAACTCTCCAGCCAACTGTATATTTGAACAAGTTACCGGACAAGTTTGCAGAAGGGTCTAAAGTATTTGTGGTTGATCCTATGCTTGCAACAGGTGGTACTATAGTGGCAGCCTTGAATCTCTTAAAAGAACGTGGAGTTGGCAACAAGCAGATTAAAGTGATATCTGCTTGCTCTTCACCTCCGGCTCTTGAAAAGCTAAGCGAGCAGTTCCCAGGGCTTCATGTGTATACTGGAATAATTGATCCCGTTCTTAATGACCAAGGGTTTATAATTCCTGGCCTTGGAGATGCTGGCGATCGTAGCTATGGTACATAA 846 0.4456 MALSRIHCHLNLPFPSDAARISSSSHNSSLPISSPKAKNPFSIVKRRSSFGAVKSQMTMEDKPLSQNNRMLVYVPAHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLIYEASRDWLPTVSGEIQSPLGVASVEFIDPREPVAVIPILRAGLALAEHASSILPATKTYHLGITRNEETLQPTVYLNKLPDKFAEGSKVFVVDPMLATGGTIVAALNLLKERGVGNKQIKVISACSSPPALEKLSEQFPGLHVYTGIIDPVLNDQGFIIPGLGDAGDRSYGT* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0552 281 CDD PRTases_typeI 137 257 IPR000836 -
Mtr4g0552 281 Pfam Uracil phosphoribosyltransferase 74 281 - -
Mtr4g0552 281 PANTHER URACIL PHOSPHORIBOSYLTRANSFERASE-LIKE 27 277 - -
Mtr4g0552 281 SUPERFAMILY PRTase-like 72 280 IPR029057 -
Mtr4g0552 281 PANTHER URIDINE KINASE 27 277 - -
Mtr4g0552 281 Gene3D - 58 281 IPR029057 -
Mtr4g0552 281 TIGRFAM upp: uracil phosphoribosyltransferase 72 281 IPR005765 GO:0004845|GO:0006223
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0552 Mtr-Chr4 6897799 6906416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0552 54 281 PRT Gene Family AT3G53900 72.368 3.78e-128 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0552 K00761 - gmx:100797953 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0552 4 6897799 6906416 Mtr4g0552 4 6897799 6906416 ECH